Factsheet for Bra031127.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13869	Canola	cytosol	98.82	98.82
CDY65077	Canola	cytosol	97.04	97.62
AT2G20560.1	Thale cress	cytosol	93.49	93.77
Bra024199.1-P	Field mustard	cytoskeleton, cytosol, nucleus	79.88	84.11
Bra011031.1-P	Field mustard	cytosol	83.14	79.83
KRH25647	Soybean	nucleus	80.77	78.22
KRH55895	Soybean	endoplasmic reticulum, nucleus	81.36	78.12
Solyc02g077670.2.1	Tomato	cytosol	76.92	75.8
PGSC0003DMT400081223	Potato	cytosol	76.33	75.66
KRH10937	Soybean	cytosol	75.44	75.22
KRH21363	Soybean	cytosol	66.86	73.38
KRH12423	Soybean	cytoskeleton, cytosol, nucleus	55.92	71.86
Bra029729.1-P	Field mustard	nucleus	67.16	69.21
Bra001337.1-P	Field mustard	cytoskeleton, cytosol, nucleus	66.27	67.07
Bra040063.1-P	Field mustard	cytoskeleton, cytosol, nucleus	63.61	65.95
KRH10940	Soybean	cytosol	61.83	62.2
KRH21362	Soybean	cytosol	61.83	61.47
Bra010365.1-P	Field mustard	mitochondrion	68.93	60.05
Bra027838.1-P	Field mustard	cytoskeleton, cytosol, nucleus	58.88	58.53
Bra020505.1-P	Field mustard	cytosol	57.4	58.26
Bra009848.1-P	Field mustard	cytosol	54.44	58.23
Bra018443.1-P	Field mustard	nucleus	58.58	56.73
Bra033783.1-P	Field mustard	cytosol	53.25	55.38
Bra019519.1-P	Field mustard	cytosol	53.55	54.52
Bra018099.1-P	Field mustard	cytosol	53.55	54.19
KRH40259	Soybean	cytosol	23.96	50.94
Bra007687.1-P	Field mustard	golgi	33.43	32.66
Bra002385.1-P	Field mustard	nucleus	36.39	29.15
Bra002386.1-P	Field mustard	nucleus	36.09	28.91
Bra003501.1-P	Field mustard	nucleus	31.66	28.84
Bra020169.1-P	Field mustard	nucleus	35.5	28.37
Bra006608.1-P	Field mustard	nucleus	34.02	28.19
Bra036942.1-P	Field mustard	nucleus	28.99	28.08
Bra032204.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	29.59	27.62
Bra030245.1-P	Field mustard	plastid	31.36	23.45
Bra018413.1-P	Field mustard	nucleus	27.22	22.89
Bra019886.1-P	Field mustard	nucleus	28.11	21.94
Bra022249.1-P	Field mustard	cytosol, mitochondrion, plastid	27.81	20.52
Bra035201.1-P	Field mustard	plastid	29.88	20.16
Bra020721.1-P	Field mustard	mitochondrion	26.33	19.91
Bra037514.1-P	Field mustard	mitochondrion	26.04	19.47
Bra011820.1-P	Field mustard	cytosol	29.29	18.71
Bra010892.1-P	Field mustard	mitochondrion	21.89	17.21
Bra014400.1-P	Field mustard	golgi	33.43	16.92

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.5.2	Gene3D:2.60.260.20	EnsemblPlantsGene:Bra031127	EnsemblPlants:Bra031127.1	EnsemblPlants:Bra031127.1-P
InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	UniProt:M4EQQ4	PFAM:PF00226	PFAM:PF01556	PRINTS:PR00625
ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR24078	PANTHER:PTHR24078:SF298	SMART:SM00271	SUPFAM:SSF46565
SUPFAM:SSF49493	UniParc:UPI0002542958	SEG:seg	:	:	:

Description

AT2G20560 (E=1e-158) | DNAJ heat shock family protein

Coordinates

chrA09:+:32366599..32367772

Molecular Weight (calculated)

37156.2 Da

IEP (calculated)

9.459

GRAVY (calculated)

-0.617

Length

338 amino acids

Sequence
(BLAST)

001: MGVDYYNVLQ VDRNASEDDL KKAYRKLAMK WHPDKNPNNK KDAEAKFKQI SEAYEVLSDP QKKAVYDQYG EEGLKGNVPP PDAGGATYFS TGDGPTSFRF
101: NPRSADDIFA EFFGFSRPFG GGGGGGTRFS SSMFGDNIFA SFGEAGGGGG AMHHGGGARK AAPIENRLPC SLEDLYKGTT KKMKISREIA DVSGKTMPVE
201: EILTIDVKPG WRKGTRITFP EKGNEQPGVT PADLVFIIDE KPHPVFTREG NDLIVTQRIS LAEALTGYTV NLTTLDGRRL TIPVTNVIHP EYEEVVPKEG
301: MPLQKDQTKR GNLRIKFKIK FPTRLTSEQK TGVKKLLG

Best Arabidopsis Sequence Match ( AT2G20560.1 )
(BLAST)

001: MGVDYYKVLQ VDRSASDDDL KKAYRKLAMK WHPDKNPNNK KDAEAMFKQI SEAYEVLSDP QKKAVYDQYG EEGLKGNVPP PDAGGATYFS TGDGPTSFRF
101: NPRNADDIFA EFFGFSSPFG GGRGGTRFSS SMFGDNMFAS FGEGGGGGGG SMHHGGARKA APIENKLPCS LEDLYKGTTK KMRISREIAD VSGKTMQVEE
201: ILTIDVKPGW KKGTKITFPE KGNEQPGVIP ADLVFIIDEK PHPVFTREGN DLIVTQKISL VEALTGYTVN LTTLDGRRLT IPVTNVVHPE YEEVVPKEGM
301: PLQKDQTKRG NLRIKFNIKF PTRLTSEQKT GVKKLLG

Arabidopsis Description

At2g20560/T13C7.15 [Source:UniProtKB/TrEMBL;Acc:Q9SIL3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.