Factsheet for Bra020721.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45921	Canola	mitochondrion	100.0	100.0
Bra037514.1-P	Field mustard	mitochondrion	87.25	86.28
AT5G48030.1	Thale cress	mitochondrion	85.91	84.21
Solyc01g086740.2.1	Tomato	mitochondrion	61.52	62.08
VIT_13s0064g01360.t01	Wine grape	mitochondrion	62.42	61.86
PGSC0003DMT400064990	Potato	mitochondrion	61.3	61.85
TraesCS7D01G045900.2	Wheat	mitochondrion	52.8	59.15
KRH13903	Soybean	mitochondrion	58.61	59.01
KRH27511	Soybean	mitochondrion	58.17	58.69
GSMUA_Achr4P11580_001	Banana	mitochondrion	59.28	58.63
Zm00001d035975_P001	Maize	mitochondrion	55.7	58.04
KRH36456	Soybean	mitochondrion	57.49	58.01
KRH43470	Soybean	mitochondrion	57.49	57.88
Zm00001d035974_P001	Maize	mitochondrion	55.48	57.81
EER89093	Sorghum	mitochondrion, plastid	56.15	57.7
GSMUA_Achr3P00410_001	Banana	mitochondrion	57.05	56.67
TraesCS7A01G051000.1	Wheat	mitochondrion	55.48	56.49
HORVU7Hr1G009230.8	Barley	plastid	54.59	54.83
Os06t0116800-01	Rice	mitochondrion	54.14	54.75
EES15725	Sorghum	mitochondrion, plastid	49.44	52.74
Os12t0168400-01	Rice	plastid	48.55	51.79
Zm00001d023537_P002	Maize	mitochondrion	48.55	51.06
TraesCS5B01G117900.1	Wheat	mitochondrion, plastid	47.87	50.83
TraesCS5D01G129700.1	Wheat	mitochondrion, plastid	47.87	50.83
TraesCS5A01G117600.1	Wheat	plastid	47.87	50.83
HORVU5Hr1G036400.3	Barley	plastid	47.87	50.12
GSMUA_Achr4P12400_001	Banana	mitochondrion	51.9	49.57
Bra010892.1-P	Field mustard	mitochondrion	32.21	33.49
Bra030245.1-P	Field mustard	plastid	32.66	32.3
Bra007687.1-P	Field mustard	golgi	21.92	28.32
Bra029729.1-P	Field mustard	nucleus	20.58	28.05
Bra035201.1-P	Field mustard	plastid	31.1	27.74
Bra040063.1-P	Field mustard	cytoskeleton, cytosol, nucleus	19.91	27.3
Bra001337.1-P	Field mustard	cytoskeleton, cytosol, nucleus	20.36	27.25
Bra009848.1-P	Field mustard	cytosol	19.24	27.22
Bra024199.1-P	Field mustard	cytoskeleton, cytosol, nucleus	19.46	27.1
Bra011820.1-P	Field mustard	cytosol	31.32	26.46
Bra033783.1-P	Field mustard	cytosol	19.24	26.46
Bra031127.1-P	Field mustard	cytosol	19.91	26.33
Bra018443.1-P	Field mustard	nucleus	20.36	26.07
Bra022249.1-P	Field mustard	cytosol, mitochondrion, plastid	26.62	25.98
Bra020505.1-P	Field mustard	cytosol	19.24	25.83
Bra018099.1-P	Field mustard	cytosol	19.24	25.75
Bra011031.1-P	Field mustard	cytosol	19.91	25.28
Bra002385.1-P	Field mustard	nucleus	23.71	25.12
Bra019519.1-P	Field mustard	cytosol	18.57	25.0
Bra027838.1-P	Field mustard	cytoskeleton, cytosol, nucleus	19.02	25.0
Bra002386.1-P	Field mustard	nucleus	23.49	24.88
Bra003501.1-P	Field mustard	nucleus	20.58	24.8
Bra006608.1-P	Field mustard	nucleus	22.6	24.75
Bra020169.1-P	Field mustard	nucleus	22.82	24.11
Bra010365.1-P	Field mustard	mitochondrion	14.99	17.27
Bra036942.1-P	Field mustard	nucleus	11.63	14.9
Bra014400.1-P	Field mustard	golgi	21.7	14.52
Bra032204.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	11.63	14.36
Bra018413.1-P	Field mustard	nucleus	11.41	12.69
Bra019886.1-P	Field mustard	nucleus	11.86	12.24

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.3.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	EnsemblPlantsGene:Bra020721	EnsemblPlants:Bra020721.1
EnsemblPlants:Bra020721.1-P	InterPro:DnaJ	InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0006950
GO:GO:0008150	GO:GO:0009408	GO:GO:0009628	GO:GO:0009987	GO:GO:0031072	GO:GO:0046872
GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	UniProt:M4DW27	HAMAP:MF_01152	PFAM:PF00226	PFAM:PF00684
PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PFscan:PS51188	PANTHER:PTHR43096
PANTHER:PTHR43096:SF25	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	SUPFAM:SSF57938	UniParc:UPI0002546149
SEG:seg	:	:	:	:	:

Description

AT5G48030 (E=8e-206) GFA2 | GFA2 (GAMETOPHYTIC FACTOR 2); heat shock protein binding / unfolded protein binding

Coordinates

chrA02:-:23510797..23513960

Molecular Weight (calculated)

48860.9 Da

IEP (calculated)

9.512

GRAVY (calculated)

-0.574

Length

447 amino acids

Sequence
(BLAST)

001: MIPTNGARVL RLLTRRCLSS TLVQDLTNQR LRGVAIGSFR RLNTGTTNPA KFLGDYASKS GDGRKWINFG GFNSSFGSTR SIHGTGSSFM SAKDYYEVLG
101: VSKNAPDGEI KKAYYGLAKK LHPDMNKDDP EAEKKFQEVS KAYEILKDKE KRDLYDQVGH EAFEQNASGG GYPNDGGFGE GFNPFDIFDI FSRNKQEFGG
201: QDVKVLLELS FMEAVQGCSK TVTFQTELAC NTCGGQGVPP GTKRERCKAC NGSGMTTMRR GMLSIQRTCD KCGGAGQTFS SICKSCRGGR VVRGQKTVKV
301: NIDPGVDNTD TLKVSKSGGA DPDGDQPGDL YVIFKVREDP VFRREGSDIH VNSVISVTQA ILGGTIQVPT LTGDVVVKVR PGTQPGQKVV LRNKGIRARK
401: STKFGDQYVH FNVSIPANIT QRQRELLEEF IKEEQGDYEK RTASASS

Best Arabidopsis Sequence Match ( AT5G48030.1 )
(BLAST)

001: MVPSNGAKVL RLLSRRCLSS SLIQDLANQK LRGVCIGSYR RLNTSVGNHA NVIGDYASKS GHDRKWINFG GFNTNFGSTR SFHGTGSSFM SAKDYYSVLG
101: VSKNAQEGEI KKAYYGLAKK LHPDMNKDDP EAETKFQEVS KAYEILKDKE KRDLYDQVGH EAFEQNASGG FPNDQGFGGG GGGGFNPFDI FGSFNGDIFN
201: MYRQDIGGQD VKVLLDLSFM EAVQGCSKTV TFQTEMACNT CGGQGVPPGT KREKCKACNG SGMTSLRRGM LSIQTTCQKC GGAGQTFSSI CKSCRGARVV
301: RGQKSVKVTI DPGVDNSDTL KVARVGGADP EGDQPGDLYV TLKVREDPVF RREGSDIHVD AVLSVTQAIL GGTIQVPTLT GDVVVKVRPG TQPGHKVVLR
401: NKGIRARKST KFGDQYVHFN VSIPANITQR QRELLEEFSK AEQGEYEQRT ATGSSQ

Arabidopsis Description

GFA2GFA2 [Source:UniProtKB/TrEMBL;Acc:A0A178UJR3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.