Factsheet for Bra014400.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
endoplasmic reticulum 2
mitochondrion 3
golgi 4
extracellular 1
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	endoplasmic reticulum
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	golgi, plastid
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra007687.1-P
Bra007818.1-P
Bra014400.1-P
Bra015047.1-P
Bra022819.1-P
Bra023110.1-P
Bra028521.1-P
Bra031657.1-P
Bra032038.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G62600.1	Bra031657.1-P	AT1G09080.1	19763086
AT3G62600.1	Bra007818.1-P	AT2G25110.1	19763086
AT3G62600.1	Bra032038.1-P	AT2G25110.1	19763086
AT3G62600.1	Bra007687.1-P	AT3G62600.1	19763086
AT3G62600.1	Bra014400.1-P	AT3G62600.1	19763086
AT3G62600.1	Bra015047.1-P	AT5G28540.1	19763086
AT3G62600.1	Bra022819.1-P	AT5G28540.1	19763086
AT3G62600.1	Bra023110.1-P	AT5G28540.1	19763086
AT3G62600.1	Bra028521.1-P	AT5G28540.1	19763086

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89142	Canola	endoplasmic reticulum	49.4	95.1
CDY63310	Canola	endoplasmic reticulum	49.4	95.1
AT3G62600.1	Thale cress	endoplasmic reticulum, golgi	47.6	91.91
Bra007687.1-P	Field mustard	golgi	47.01	90.75
Bra003501.1-P	Field mustard	nucleus	46.26	83.29
VIT_07s0005g01220.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	40.87	79.13
Solyc01g079610.2.1	Tomato	nucleus	40.42	78.26
PGSC0003DMT400023249	Potato	endoplasmic reticulum, golgi	40.27	77.97
TraesCS1B01G125100.1	Wheat	nucleus	39.07	74.57
TraesCS1D01G107200.1	Wheat	nucleus	38.92	74.29
TraesCS1A01G099300.1	Wheat	nucleus	38.77	74.0
Os05t0156500-01	Rice	cytosol, nucleus	16.17	73.97
GSMUA_Achr8P33890_001	Banana	endoplasmic reticulum	37.87	73.55
EES17752	Sorghum	endoplasmic reticulum, golgi	38.17	72.86
Zm00001d009783_P004	Maize	mitochondrion	36.98	70.57
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, vacuole	38.77	69.44
Zm00001d037586_P001	Maize	endoplasmic reticulum	37.72	68.66
KRH55068	Soybean	cytosol	13.47	65.69
KXG32445	Sorghum	endoplasmic reticulum	33.08	63.87
HORVU1Hr1G022990.1	Barley	cytosol	38.47	60.47
Zm00001d009210_P001	Maize	endoplasmic reticulum	30.09	49.51
Bra029729.1-P	Field mustard	nucleus	17.96	36.59
Bra001337.1-P	Field mustard	cytoskeleton, cytosol, nucleus	17.81	35.63
Bra040063.1-P	Field mustard	cytoskeleton, cytosol, nucleus	17.37	35.58
Bra009848.1-P	Field mustard	cytosol	16.77	35.44
Bra024199.1-P	Field mustard	cytoskeleton, cytosol, nucleus	16.77	34.89
Bra020505.1-P	Field mustard	cytosol	16.77	33.63
Bra031127.1-P	Field mustard	cytosol	16.92	33.43
Bra011031.1-P	Field mustard	cytosol	17.37	32.95
Bra018443.1-P	Field mustard	nucleus	17.07	32.66
Bra027838.1-P	Field mustard	cytoskeleton, cytosol, nucleus	16.62	32.65
Bra033783.1-P	Field mustard	cytosol	15.57	32.0
Bra002385.1-P	Field mustard	nucleus	19.61	31.04
Bra018099.1-P	Field mustard	cytosol	15.42	30.84
Bra002386.1-P	Field mustard	nucleus	19.31	30.57
Bra020169.1-P	Field mustard	nucleus	19.16	30.26
Bra006608.1-P	Field mustard	nucleus	18.41	30.15
Bra019519.1-P	Field mustard	cytosol	14.97	30.12
Bra030245.1-P	Field mustard	plastid	16.02	23.67
Bra010365.1-P	Field mustard	mitochondrion	13.47	23.2
Bra035201.1-P	Field mustard	plastid	16.32	21.76
Bra020721.1-P	Field mustard	mitochondrion	14.52	21.7
Bra037514.1-P	Field mustard	mitochondrion	14.52	21.46
Bra011820.1-P	Field mustard	cytosol	16.47	20.79
Bra036942.1-P	Field mustard	nucleus	10.48	20.06
Bra032204.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	10.33	19.06
Bra010892.1-P	Field mustard	mitochondrion	11.53	17.91
Bra022249.1-P	Field mustard	cytosol, mitochondrion, plastid	11.83	17.25
Bra018413.1-P	Field mustard	nucleus	9.58	15.92
Bra019886.1-P	Field mustard	nucleus	10.03	15.47

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.1.2.1.2	Gene3D:2.60.260.20	EnsemblPlantsGene:Bra014400	EnsemblPlants:Bra014400.1	EnsemblPlants:Bra014400.1-P
ncoils:Coil	InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf
UniProt:M4DD32	PFAM:PF00226	PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076
PANTHER:PTHR43888	PANTHER:PTHR43888:SF14	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	TMHMM:TMhelix
UniParc:UPI0002545447	SEG:seg	:	:	:	:

Description

AT3G62600 (E=3e-161) ATERDJ3B | ATERDJ3B; heat shock protein binding / unfolded protein binding

Coordinates

chrA04:+:315556..319342

Molecular Weight (calculated)

74870.6 Da

IEP (calculated)

8.320

GRAVY (calculated)

-0.323

Length

668 amino acids

Sequence
(BLAST)

001: MVGGRRTRQT LRRRRGLFVV LLPVVLSFRL IFTPAMSRED SLATAILRSS DSKAGVSPSV RRQTSHSVHY VQAVQLLSKR RYQTTNSNPW SQARLESHKP
101: PRVAPILQTG VRSRSFTNGG SLPLRRSSTG DLFHGADERP KSFVIRPMLT ALIKVISFYI WAWPICSFEP VSSTIYLQGS RSIEENLIRH VMSFGDWVSY
201: AENSGGFTGF PPPCSTSLDF SCWKKLPEGL PGSVLIRSYS SFEEKLLPPY LLSIERGVSL VSLLSVCFSF LIVLLSCVAV STGPEDAIEI TSVFLVDEIW
301: TLTSHYVTIL PLFDFVGKFP STHSSTVLNS LSSSIEDLSC LVYLCISYYD VLQVPKGASD EQIKRAYRKL ALKYHPDKNQ GNEEATRKFA DINNAYEVLS
401: DEEKREIYNK YGEEGLKQHA ANGGRGGGGG GMNMQDIFSQ FFGGGGSREE EEKVVKGDDV IVELEATLED LYMGGSVKVW REKNEIKPAP GKRKCNCRNE
501: VYHRQVGPGM FQQMTEQVCD KCPNVKYERE GYFVTVDIEK GMKDGEEVSF YEDGEPILDG DPGDLKFRIK TAPHARFRRD GNDLHMTVNI TLVEALVGFE
601: KSFKHLDDHD VDIGSKGITK PKEVKKFKGE GMPLHYSTKK GNLFVTFEVL FPSSLTDDQK KKIKQVLA

Best Arabidopsis Sequence Match ( AT3G62600.1 )
(BLAST)

001: MAIRWSELCI VLFALSYAIC VLAGKSYYDV LQVPKGASDE QIKRAYRKLA LKYHPDKNQG NEEATRKFAE INNAYEVLSD EEKREIYNKY GEEGLKQFSA
101: NGGRGGGGGG MNMQDIFSSF FGGGSMEEEE KVVKGDDVIV ELEATLEDLY MGGSMKVWRE KNVIKPAPGK RKCNCRNEVY HRQIGPGMFQ QMTEQVCDKC
201: PNVKYEREGY FVTVDIEKGM KDGEEVSFYE DGEPILDGDP GDLKFRIRTA PHARFRRDGN DLHMNVNITL VEALVGFEKS FKHLDDHEVD ISSKGITKPK
301: EVKKFKGEGM PLHYSTKKGN LFVTFEVLFP SSLTDDQKKK IKEVFA

Arabidopsis Description

ERDJ3BDnaJ protein ERDJ3B [Source:UniProtKB/Swiss-Prot;Acc:Q9LZK5]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.