Factsheet for Bra001337.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytoskeleton, nucleus, cytosol

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 2
golgi 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68815	Canola	cytoskeleton, cytosol, nucleus	99.7	99.7
CDY07893	Canola	cytosol	95.21	98.45
Bra040063.1-P	Field mustard	cytoskeleton, cytosol, nucleus	91.32	93.56
Bra029729.1-P	Field mustard	nucleus	91.02	92.68
AT3G08910.1	Thale cress	nucleus	89.52	92.57
KRG88624	Soybean	nucleus	81.44	80.71
VIT_08s0105g00350.t01	Wine grape	cytosol	81.44	80.47
KRH65726	Soybean	nucleus	81.14	80.42
PGSC0003DMT400059397	Potato	cytosol	81.14	79.71
Solyc09g005350.2.1	Tomato	nucleus, plastid	81.14	79.71
KRH75968	Soybean	nucleus	78.44	77.74
Bra024199.1-P	Field mustard	cytoskeleton, cytosol, nucleus	67.37	70.09
Bra011031.1-P	Field mustard	cytosol	70.66	67.05
Bra031127.1-P	Field mustard	cytosol	67.07	66.27
Zm00001d010958_P001	Maize	cytosol	63.77	65.34
EES17644	Sorghum	cytosol	60.78	64.86
TraesCS1A01G070300.1	Wheat	cytosol	60.48	59.59
Bra009848.1-P	Field mustard	cytosol	55.99	59.18
TraesCS1D01G072800.1	Wheat	nucleus	60.18	58.43
TraesCS1B01G088700.1	Wheat	cytosol	60.48	58.21
Bra020505.1-P	Field mustard	cytosol	57.19	57.36
Bra018099.1-P	Field mustard	cytosol	56.59	56.59
Bra027838.1-P	Field mustard	cytoskeleton, cytosol, nucleus	57.48	56.47
Bra019519.1-P	Field mustard	cytosol	55.99	56.33
Bra033783.1-P	Field mustard	cytosol	54.79	56.31
Bra018443.1-P	Field mustard	nucleus	55.69	53.3
HORVU1Hr1G015040.2	Barley	plastid	59.88	52.22
GSMUA_Achr6P15600_001	Banana	cytosol	66.47	50.23
Bra010365.1-P	Field mustard	mitochondrion	54.79	47.16
HORVU1Hr1G015060.2	Barley	plastid	32.63	38.25
Bra007687.1-P	Field mustard	golgi	35.33	34.1
Bra003501.1-P	Field mustard	nucleus	34.43	31.0
Bra036942.1-P	Field mustard	nucleus	29.64	28.37
Bra032204.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	30.54	28.18
Bra002385.1-P	Field mustard	nucleus	34.73	27.49
Bra020169.1-P	Field mustard	nucleus	34.73	27.42
Bra002386.1-P	Field mustard	nucleus	34.43	27.25
Bra006608.1-P	Field mustard	nucleus	32.63	26.72
Bra018413.1-P	Field mustard	nucleus	30.84	25.62
Bra019886.1-P	Field mustard	nucleus	31.44	24.25
Bra030245.1-P	Field mustard	plastid	27.84	20.58
Bra020721.1-P	Field mustard	mitochondrion	27.25	20.36
Bra037514.1-P	Field mustard	mitochondrion	26.95	19.91
Bra035201.1-P	Field mustard	plastid	28.44	18.96
Bra022249.1-P	Field mustard	cytosol, mitochondrion, plastid	25.45	18.56
Bra010892.1-P	Field mustard	mitochondrion	23.05	17.91
Bra014400.1-P	Field mustard	golgi	35.63	17.81
Bra011820.1-P	Field mustard	cytosol	27.54	17.39

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.5.2	Gene3D:2.60.260.20	EnsemblPlantsGene:Bra001337	EnsemblPlants:Bra001337.1	EnsemblPlants:Bra001337.1-P
InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	UniProt:M4CAV8	PFAM:PF00226	PFAM:PF01556	PRINTS:PR00625
ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR24078	PANTHER:PTHR24078:SF298	SMART:SM00271	SUPFAM:SSF46565
SUPFAM:SSF49493	UniParc:UPI0002540617	SEG:seg	:	:	:

Description

AT3G08910 (E=4e-158) | DNAJ heat shock protein, putative

Coordinates

chrA03:+:15911121..15913267

Molecular Weight (calculated)

36955.8 Da

IEP (calculated)

9.784

GRAVY (calculated)

-0.642

Length

334 amino acids

Sequence
(BLAST)

001: MGVDYYKVLQ VDRSAKDDDL KKAYRKLAMK WHPDKNPNTK KEAEAKFKQI SEAYDVLSDP QKRAIYDQYG EEGLNSQAPP PGSGGFPGGS DGGASFRFNG
101: RSADDIFSEF FGFARPFGDT RGAGPSGGGF RFAEDVFSSY RSATGEASNA PPRKAAPIER QLPCSLEDLY KGITKKMKIS RDVLDSSWRP TTVEEILTIE
201: IKPGWKKGTK ITFPEKGNEQ RGIIPSDLVF IVDEKPHAVF KRDGNDLVIT QKIPLVEALT GYTAQVTTLD GRTLTVPVNN VISPTYEEVV KGEGMPIPKD
301: PSRKGNLRIK FNVKFPSRLT TEQKTGIKRM FSSA

Best Arabidopsis Sequence Match ( AT3G08910.1 )
(BLAST)

001: MGVDYYKVLQ VDRNAKDDDL KKAYRKLAMK WHPDKNPNNK KDAEAKFKQI SEAYDVLSDP QKRAIYDQYG EEGLTSQAPP PGAGGGFSDG GASFRFNGRS
101: ADDIFSEFFG FTRPFGDSRG AGPSNGFRFA EDVFSSNVVP PRKAAPIERQ LPCSLEDLYK GVSKKMKISR DVLDSSGRPT TVEEILTIEI KPGWKKGTKI
201: TFPEKGNEQR GIIPSDLVFI VDEKPHAVFK RDGNDLVMTQ KIPLVEALTG YTAQVSTLDG RSVTVPINNV ISPSYEEVVK GEGMPIPKDP SKKGNLRIKF
301: TVKFPSRLTT EQKSGIKRMF SSS

Arabidopsis Description

At3g08910 [Source:UniProtKB/TrEMBL;Acc:Q9SR91]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.