Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH65726 | Soybean | nucleus | 99.7 | 99.7 |
| KRH75968 | Soybean | nucleus | 95.85 | 95.85 |
| KRH00241 | Soybean | cytosol, nucleus | 86.05 | 85.55 |
| PGSC0003DMT400059397 | Potato | cytosol | 84.57 | 83.82 |
| Solyc09g005350.2.1 | Tomato | nucleus, plastid | 84.57 | 83.82 |
| KRH49388 | Soybean | cytosol | 86.05 | 83.81 |
| CDY64940 | Canola | nucleus | 79.82 | 82.01 |
| CDY68815 | Canola | cytoskeleton, cytosol, nucleus | 81.01 | 81.74 |
| Bra029729.1-P | Field mustard | nucleus | 79.53 | 81.71 |
| CDY22173 | Canola | cytosol | 81.31 | 81.55 |
| Bra001337.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 80.71 | 81.44 |
| AT3G08910.1 | Thale cress | nucleus | 78.04 | 81.42 |
| CDY58657 | Canola | cytosol | 78.64 | 81.29 |
| CDY07893 | Canola | cytosol | 77.74 | 81.11 |
| Bra040063.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 77.74 | 80.37 |
| CDY27963 | Canola | cytosol | 78.04 | 79.94 |
| AT5G01390.1 | Thale cress | cytosol | 75.96 | 76.42 |
| KRH25647 | Soybean | nucleus | 73.59 | 71.06 |
| KRH10937 | Soybean | cytosol | 71.22 | 70.8 |
| KRH55895 | Soybean | endoplasmic reticulum, nucleus | 73.29 | 70.17 |
| KRH21363 | Soybean | cytosol | 62.31 | 68.18 |
| KRH12423 | Soybean | cytoskeleton, cytosol, nucleus | 52.23 | 66.92 |
| EES17644 | Sorghum | cytosol | 59.64 | 64.22 |
| KRH61858 | Soybean | cytosol | 26.71 | 63.38 |
| KRH63415 | Soybean | cytosol | 27.6 | 63.27 |
| Zm00001d010958_P001 | Maize | cytosol | 60.83 | 62.88 |
| KRH10940 | Soybean | cytosol | 61.42 | 61.61 |
| TraesCS1A01G070300.1 | Wheat | cytosol | 61.72 | 61.36 |
| KRH21362 | Soybean | cytosol | 61.72 | 61.18 |
| TraesCS1B01G088700.1 | Wheat | cytosol | 62.02 | 60.23 |
| TraesCS1D01G072800.1 | Wheat | nucleus | 61.42 | 60.17 |
| KRH69388 | Soybean | cytosol | 48.96 | 59.78 |
| KRH52529 | Soybean | cytosol | 57.57 | 59.51 |
| KRH74747 | Soybean | cytosol | 47.77 | 58.12 |
| KRH45833 | Soybean | cytosol | 48.37 | 56.4 |
| KRG99186 | Soybean | cytosol | 48.37 | 56.4 |
| KRH54495 | Soybean | nucleus | 58.16 | 55.84 |
| KRH61857 | Soybean | cytosol, nucleus | 18.99 | 55.17 |
| HORVU1Hr1G015040.2 | Barley | plastid | 62.31 | 54.83 |
| GSMUA_Achr6P15600_001 | Banana | cytosol | 70.92 | 54.07 |
| KRH63417 | Soybean | nucleus | 29.97 | 49.75 |
| KRH40259 | Soybean | cytosol | 22.85 | 48.43 |
| KRH60063 | Soybean | endoplasmic reticulum, golgi | 28.19 | 47.98 |
| HORVU1Hr1G015060.2 | Barley | plastid | 33.53 | 39.65 |
| KRG96505 | Soybean | nucleus | 37.09 | 36.44 |
| KRH68242 | Soybean | endoplasmic reticulum | 36.8 | 36.15 |
| KRH55068 | Soybean | cytosol | 14.24 | 35.04 |
| KRH69236 | Soybean | endoplasmic reticulum | 34.42 | 33.53 |
| KRH10414 | Soybean | cytosol | 34.42 | 30.45 |
| KRH25334 | Soybean | nucleus | 36.8 | 29.74 |
| KRG88903 | Soybean | nucleus | 36.8 | 29.74 |
| KRH48754 | Soybean | endoplasmic reticulum | 36.5 | 29.29 |
| KRH22611 | Soybean | nucleus | 35.91 | 29.02 |
| KRH26709 | Soybean | nucleus | 35.91 | 29.02 |
| KRH66593 | Soybean | endoplasmic reticulum | 35.91 | 28.81 |
| KRH44054 | Soybean | cytosol | 32.05 | 28.12 |
| KRH64663 | Soybean | plastid | 29.38 | 27.97 |
| KRG90292 | Soybean | cytosol, nucleus, plastid | 21.66 | 25.52 |
| KRH59311 | Soybean | plastid | 29.08 | 22.63 |
| KRG97564 | Soybean | plastid | 29.38 | 22.5 |
| KRH31310 | Soybean | nucleus, plastid | 29.08 | 22.27 |
| KRH43163 | Soybean | plastid | 28.49 | 21.97 |
| KRH36456 | Soybean | mitochondrion | 27.0 | 20.54 |
| KRH27511 | Soybean | mitochondrion | 27.0 | 20.54 |
| KRH09715 | Soybean | nucleus, plastid | 29.67 | 20.28 |
| KRH44477 | Soybean | plastid | 26.11 | 19.82 |
| KRH43470 | Soybean | mitochondrion | 25.52 | 19.37 |
| KRH13903 | Soybean | mitochondrion | 25.52 | 19.37 |
| KRH16800 | Soybean | mitochondrion | 24.93 | 17.91 |
| KRH72418 | Soybean | mitochondrion | 24.93 | 17.91 |
| KRH48662 | Soybean | nucleus, plastid | 27.89 | 17.9 |
| KRH23590 | Soybean | nucleus | 17.8 | 16.81 |
Protein Annotations
| Gene3D:1.10.287.110 | EntrezGene:100777607 | MapMan:19.1.5.2 | Gene3D:2.60.260.20 | UniProt:A0A0R0E480 | InterPro:DnaJ_C |
| InterPro:DnaJ_domain | InterPro:DnaJ_domain_CS | EnsemblPlantsGene:GLYMA_U042300 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006457 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0051082 | InterPro:HSP40/DnaJ_pept-bd | InterPro:IPR001623 |
| InterPro:IPR036869 | InterPro:J_dom_sf | EnsemblPlants:KRG88624 | ProteinID:KRG88624 | ProteinID:KRG88624.1 | PFAM:PF00226 |
| PFAM:PF01556 | PRINTS:PR00625 | ScanProsite:PS00636 | PFscan:PS50076 | PANTHER:PTHR24078 | PANTHER:PTHR24078:SF298 |
| SMART:SM00271 | SUPFAM:SSF46565 | SUPFAM:SSF49493 | UniParc:UPI0006ED837A | SEG:seg | : |
Description
hypothetical protein
Coordinates
chrscaffold_73:+:27273..32218
Molecular Weight (calculated)
37126.1 Da
IEP (calculated)
9.656
GRAVY (calculated)
-0.654
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVDYYKLLQ VDRNASDEDL KKAYRKLAMK WHPDKNPNNK RDAEAKFKQI SEAYDVLSDP QKRGVYDQYG EEGLKGQVPP PGAGGFSGGS DGGPTMFRFN
101: PRSADDIFSE FFGFSSPYGM GDMGGRAGPS GYPRFADDLF ASFSRSAAGE GSSNVPRKGA PIEKTLQCSL EDLYKGTTKK MKISRDVIDS SGRPTTVEEI
201: LTIEIKPGWK KGTKITFPEK GNEQRGVIPS DLVFIIDEKP HGVFKRDGND LVITQKISLV EALTGYTAQL TTLDGRNLTV STNSIISPTY EEVIKGEGMP
301: IPKEPSKKGN LRIKFNIKFP SRLTSEQKTG IKRLLTS
101: PRSADDIFSE FFGFSSPYGM GDMGGRAGPS GYPRFADDLF ASFSRSAAGE GSSNVPRKGA PIEKTLQCSL EDLYKGTTKK MKISRDVIDS SGRPTTVEEI
201: LTIEIKPGWK KGTKITFPEK GNEQRGVIPS DLVFIIDEKP HGVFKRDGND LVITQKISLV EALTGYTAQL TTLDGRNLTV STNSIISPTY EEVIKGEGMP
301: IPKEPSKKGN LRIKFNIKFP SRLTSEQKTG IKRLLTS
001: MGVDYYKVLQ VDRNAKDDDL KKAYRKLAMK WHPDKNPNNK KDAEAKFKQI SEAYDVLSDP QKRAIYDQYG EEGLTSQAPP PGAGGGFSDG GASFRFNGRS
101: ADDIFSEFFG FTRPFGDSRG AGPSNGFRFA EDVFSSNVVP PRKAAPIERQ LPCSLEDLYK GVSKKMKISR DVLDSSGRPT TVEEILTIEI KPGWKKGTKI
201: TFPEKGNEQR GIIPSDLVFI VDEKPHAVFK RDGNDLVMTQ KIPLVEALTG YTAQVSTLDG RSVTVPINNV ISPSYEEVVK GEGMPIPKDP SKKGNLRIKF
301: TVKFPSRLTT EQKSGIKRMF SSS
101: ADDIFSEFFG FTRPFGDSRG AGPSNGFRFA EDVFSSNVVP PRKAAPIERQ LPCSLEDLYK GVSKKMKISR DVLDSSGRPT TVEEILTIEI KPGWKKGTKI
201: TFPEKGNEQR GIIPSDLVFI VDEKPHAVFK RDGNDLVMTQ KIPLVEALTG YTAQVSTLDG RSVTVPINNV ISPSYEEVVK GEGMPIPKDP SKKGNLRIKF
301: TVKFPSRLTT EQKSGIKRMF SSS
Arabidopsis Description
At3g08910 [Source:UniProtKB/TrEMBL;Acc:Q9SR91]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.