CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 3
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH12423	Soybean	cytoskeleton, cytosol, nucleus	73.05	85.55
KRH10937	Soybean	cytosol	91.88	83.48
KRH25647	Soybean	nucleus	80.19	70.77
PGSC0003DMT400081223	Potato	cytosol	77.27	69.79
Solyc02g077670.2.1	Tomato	cytosol	77.27	69.39
KRH55895	Soybean	endoplasmic reticulum, nucleus	78.9	69.03
CDY65077	Canola	cytosol	74.03	67.86
CDY13869	Canola	cytosol	73.7	67.16
Bra031127.1-P	Field mustard	cytosol	73.38	66.86
AT2G20560.1	Thale cress	cytosol	73.05	66.77
CDY35188	Canola	cytosol	68.18	64.81
CDY29908	Canola	cytoskeleton, cytosol, nucleus	67.21	64.49
Bra024199.1-P	Field mustard	cytoskeleton, cytosol, nucleus	67.21	64.49
KRH00241	Soybean	cytosol, nucleus	69.81	63.42
CDX97443	Canola	cytosol	61.69	63.12
CDX92876	Canola	cytoskeleton, cytosol, nucleus	64.94	62.89
CDY38388	Canola	cytosol	69.81	62.87
KRH75968	Soybean	nucleus	68.51	62.61
KRG88624	Soybean	nucleus	68.18	62.31
KRH65726	Soybean	nucleus	68.18	62.31
Bra011031.1-P	Field mustard	cytosol	70.78	61.93
AT4G28480.1	Thale cress	cytoskeleton, cytosol, nucleus	69.48	61.49
KRH49388	Soybean	cytosol	68.18	60.69
KRH10940	Soybean	cytosol	65.26	59.82
KRH21362	Soybean	cytosol	65.58	59.41
KRH63415	Soybean	cytosol	26.62	55.78
KRH61857	Soybean	cytosol, nucleus	20.78	55.17
KRH52529	Soybean	cytosol	56.17	53.07
KRH40259	Soybean	cytosol	25.32	49.06
KRH69388	Soybean	cytosol	43.83	48.91
KRH61858	Soybean	cytosol	22.4	48.59
KRG99186	Soybean	cytosol	45.45	48.44
KRH45833	Soybean	cytosol	45.13	48.1
KRH54495	Soybean	nucleus	53.9	47.29
KRH74747	Soybean	cytosol	41.88	46.57
KRH60063	Soybean	endoplasmic reticulum, golgi	27.92	43.43
KRH63417	Soybean	nucleus	25.65	38.92
KRG96505	Soybean	nucleus	33.12	29.74
KRH55068	Soybean	cytosol	12.99	29.2
KRH68242	Soybean	endoplasmic reticulum	32.47	29.15
KRH69236	Soybean	endoplasmic reticulum	31.17	27.75
KRH66593	Soybean	endoplasmic reticulum	34.09	25.0
KRH48754	Soybean	endoplasmic reticulum	34.09	25.0
KRG88903	Soybean	nucleus	33.44	24.7
KRH25334	Soybean	nucleus	33.44	24.7
KRH26709	Soybean	nucleus	33.44	24.7
KRH22611	Soybean	nucleus	33.12	24.46
KRH10414	Soybean	cytosol	29.87	24.15
KRH64663	Soybean	plastid	27.6	24.01
KRH44054	Soybean	cytosol	28.25	22.66
KRG90292	Soybean	cytosol, nucleus, plastid	19.48	20.98
KRG97564	Soybean	plastid	28.25	19.77
KRH59311	Soybean	plastid	27.6	19.63
KRH31310	Soybean	nucleus, plastid	27.6	19.32
KRH43163	Soybean	plastid	26.95	18.99
KRH09715	Soybean	nucleus, plastid	27.92	17.44
KRH44477	Soybean	plastid	24.68	17.12
KRH48662	Soybean	nucleus, plastid	27.6	16.19
KRH36456	Soybean	mitochondrion	22.08	15.35
KRH27511	Soybean	mitochondrion	22.08	15.35
KRH72418	Soybean	mitochondrion	23.05	15.14
KRH43470	Soybean	mitochondrion	21.75	15.09
KRH13903	Soybean	mitochondrion	21.75	15.09
KRH16800	Soybean	mitochondrion	22.73	14.93
KRH23590	Soybean	nucleus	14.94	12.89

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.5.2	Gene3D:2.60.260.20	EMBL:ACUP02008354	InterPro:DnaJ_C	InterPro:DnaJ_domain
InterPro:DnaJ_domain_CS	EnsemblPlantsGene:GLYMA_13G235500	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006457
GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	UniProt:I1M1Z8	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	EnsemblPlants:KRH21363	ProteinID:KRH21363	ProteinID:KRH21363.1	PFAM:PF00226
PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR24078	PANTHER:PTHR24078:SF520
SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	UniParc:UPI00023CF02A	SEG:seg	:

Description

hypothetical protein

Coordinates

chr13:-:34609107..34611350

Molecular Weight (calculated)

34184.8 Da

IEP (calculated)

9.707

GRAVY (calculated)

-0.620

Length

308 amino acids

Sequence
(BLAST)

001: MKWHPDKNPS NKKEAETKFK QISEAYEVLS DPQKRAIYDE YGEEGLKGQV PPPDAGGHTF FQTRDGPTTF RFNPRNANDI FAEFFGFSSP FGGGGRGSGS
101: NGMRGGSFGG IFGDDIFSSF GEGRTMSRQG TRKAPPIEKT LPCTLEELYK GTTKKMKISR EIVDASGKTL PVEEILTIEI KRGWKRGTKI MFPEKGNEQS
201: NVIASDLVFV IDEKPHPVFT RDGNDLVVTQ KVSLAEALTG YTVHLSTLDG RVLNIPVNNV IHPTYEEMVP REGMPIPKDP SKRGNLRIKF PAKLTSEQKV
301: GIKKLLPY

Best Arabidopsis Sequence Match ( AT2G20560.1 )
(BLAST)

001: MGVDYYKVLQ VDRSASDDDL KKAYRKLAMK WHPDKNPNNK KDAEAMFKQI SEAYEVLSDP QKKAVYDQYG EEGLKGNVPP PDAGGATYFS TGDGPTSFRF
101: NPRNADDIFA EFFGFSSPFG GGRGGTRFSS SMFGDNMFAS FGEGGGGGGG SMHHGGARKA APIENKLPCS LEDLYKGTTK KMRISREIAD VSGKTMQVEE
201: ILTIDVKPGW KKGTKITFPE KGNEQPGVIP ADLVFIIDEK PHPVFTREGN DLIVTQKISL VEALTGYTVN LTTLDGRRLT IPVTNVVHPE YEEVVPKEGM
301: PLQKDQTKRG NLRIKFNIKF PTRLTSEQKT GVKKLLG

Arabidopsis Description

At2g20560/T13C7.15 [Source:UniProtKB/TrEMBL;Acc:Q9SIL3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.