CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13869	Canola	cytosol	98.21	97.63
Bra031127.1-P	Field mustard	cytosol	97.62	97.04
AT2G20560.1	Thale cress	cytosol	94.35	94.07
CDY35188	Canola	cytosol	82.14	85.19
CDY29908	Canola	cytoskeleton, cytosol, nucleus	80.36	84.11
CDX92876	Canola	cytoskeleton, cytosol, nucleus	78.87	83.33
CDX97443	Canola	cytosol	73.51	82.06
CDY38388	Canola	cytosol	82.74	81.29
KRH25647	Soybean	nucleus	82.44	79.37
KRH55895	Soybean	endoplasmic reticulum, nucleus	83.04	79.26
KRH10937	Soybean	cytosol	77.38	76.7
Solyc02g077670.2.1	Tomato	cytosol	77.68	76.09
PGSC0003DMT400081223	Potato	cytosol	76.79	75.66
KRH21363	Soybean	cytosol	67.86	74.03
KRH12423	Soybean	cytoskeleton, cytosol, nucleus	57.14	73.0
CDY64940	Canola	nucleus	67.86	69.51
CDY58657	Canola	cytosol	66.37	68.4
CDY27963	Canola	cytosol	66.37	67.78
CDY07893	Canola	cytosol	64.88	67.49
CDY68815	Canola	cytoskeleton, cytosol, nucleus	66.96	67.37
CDY22173	Canola	cytosol	66.96	66.96
KRH10940	Soybean	cytosol	63.39	63.39
KRH21362	Soybean	cytosol	63.39	62.65
CDY20944	Canola	cytosol	56.25	61.97
CDY37986	Canola	cytosol	41.67	59.32
CDY20637	Canola	cytosol	55.95	58.75
CDY30900	Canola	cytoskeleton, cytosol, nucleus	58.63	58.46
CDY45143	Canola	cytoskeleton, cytosol, nucleus	57.14	58.01
CDY54902	Canola	cytosol	57.44	57.96
CDY05498	Canola	cytosol	57.44	57.96
CDX88188	Canola	cytosol	55.06	57.63
CDX80523	Canola	cytosol	54.76	57.32
CDY36915	Canola	cytosol	54.46	54.79
CDX83026	Canola	cytosol	53.27	54.57
CDX68447	Canola	cytosol	55.06	53.94
KRH40259	Soybean	cytosol	24.7	52.2
CDY21803	Canola	nucleus	51.79	51.48
CDY24146	Canola	cytosol	54.17	48.28
CDY59898	Canola	endoplasmic reticulum, golgi	34.52	33.43
CDX67894	Canola	endoplasmic reticulum, golgi	32.44	33.33
CDX89142	Canola	endoplasmic reticulum	34.23	33.14
CDY63310	Canola	endoplasmic reticulum	34.23	33.14
CDX76646	Canola	golgi	33.93	32.95
CDY11430	Canola	golgi	33.93	32.95
CDY65546	Canola	nucleus	36.9	29.45
CDX92385	Canola	nucleus	36.61	29.15
CDX92386	Canola	nucleus	36.61	29.15
CDY66166	Canola	plastid	29.76	28.74
CDY14974	Canola	nucleus	29.46	28.61
CDY09117	Canola	nucleus	36.01	28.61
CDX88812	Canola	nucleus	34.23	28.19
CDX70980	Canola	nucleus	33.63	27.76
CDY20589	Canola	nucleus	28.27	24.17
CDX89453	Canola	plastid	31.55	23.45
CDY25588	Canola	plastid	31.55	23.35
CDY20977	Canola	nucleus	27.98	23.33
CDY16617	Canola	nucleus	14.29	23.08
CDX97927	Canola	nucleus	29.17	22.63
CDY67277	Canola	cytosol, nucleus, plastid	28.87	22.3
CDY63891	Canola	cytosol	29.46	20.37
CDY58774	Canola	plastid	30.06	20.2
CDX87288	Canola	plastid	30.06	20.16
CDY45921	Canola	mitochondrion	26.79	20.13
CDY35761	Canola	mitochondrion	26.49	19.91
CDX69371	Canola	mitochondrion	29.46	19.76
CDY54516	Canola	mitochondrion	26.49	19.65
CDX86330	Canola	mitochondrion	26.49	19.52
CDX95817	Canola	plastid	28.27	18.89
CDX92166	Canola	plastid	28.27	18.81
CDX90134	Canola	mitochondrion	22.32	17.44
CDY35719	Canola	mitochondrion	22.02	14.89

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.5.2	Gene3D:2.60.260.20	GO:A0A078JI59	UniProt:A0A078JI59	EnsemblPlants:CDY65077
ProteinID:CDY65077	ProteinID:CDY65077.1	InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082
EnsemblPlantsGene:GSBRNA2T00044136001	InterPro:HSP40/DnaJ_pept-bd	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	PFAM:PF00226
PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR24078	PANTHER:PTHR24078:SF298
SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	UniParc:UPI0004EDF0E3	SEG:seg	:

Description

BnaA09g55990DBnaA09g55990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JI59]

Coordinates

chrLK034650:+:9555..10903

Molecular Weight (calculated)

36999.0 Da

IEP (calculated)

9.582

GRAVY (calculated)

-0.629

Length

336 amino acids

Sequence
(BLAST)

001: MGVDYYNVLQ VDRNASDNDL KKAYRKLAMK WHPDKNPNNK KDAEAKFKQI SEAYEVLSDP QKKAVYDQYG EEGLKGNVPP PDAGGATYFS TGDGPTSFRF
101: NPRNADDIFA EFFGFSRPFG GGGGGGTRFS SSMFGDNIFA SFGEGGGGAM HHGGGARKAA PIENRLPCSL EDLYKGTTKK MKISREIADV SGKTMPVEEI
201: LTIDVKPGWK KGTRITFPEK GNEQPGVTPA DLVFIIDEKR HPVFTREGND LIVTQKISLA EALTGYTVNL TTLDGRRLTI PVTNVIHPEY EEVVPKEGMP
301: LQKDQTKRGN LRIKFNIKFP TRLTSEQKAG VKKLLG

Best Arabidopsis Sequence Match ( AT2G20560.1 )
(BLAST)

001: MGVDYYKVLQ VDRSASDDDL KKAYRKLAMK WHPDKNPNNK KDAEAMFKQI SEAYEVLSDP QKKAVYDQYG EEGLKGNVPP PDAGGATYFS TGDGPTSFRF
101: NPRNADDIFA EFFGFSSPFG GGRGGTRFSS SMFGDNMFAS FGEGGGGGGG SMHHGGARKA APIENKLPCS LEDLYKGTTK KMRISREIAD VSGKTMQVEE
201: ILTIDVKPGW KKGTKITFPE KGNEQPGVIP ADLVFIIDEK PHPVFTREGN DLIVTQKISL VEALTGYTVN LTTLDGRRLT IPVTNVVHPE YEEVVPKEGM
301: PLQKDQTKRG NLRIKFNIKF PTRLTSEQKT GVKKLLG

Arabidopsis Description

At2g20560/T13C7.15 [Source:UniProtKB/TrEMBL;Acc:Q9SIL3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.