Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY35188 Canola cytosol 83.72 77.78
CDX92876 Canola cytoskeleton, cytosol, nucleus 82.06 77.67
CDY29908 Canola cytoskeleton, cytosol, nucleus 82.72 77.57
AT4G28480.1 Thale cress cytoskeleton, cytosol, nucleus 89.37 77.3
CDY38388 Canola cytosol 87.04 76.61
CDY65077 Canola cytosol 82.06 73.51
CDY13869 Canola cytosol 82.39 73.37
KRH25647 Soybean nucleus 77.41 66.76
KRH55895 Soybean endoplasmic reticulum, nucleus 76.74 65.62
KRH10937 Soybean cytosol 71.76 63.72
PGSC0003DMT400081223 Potato cytosol 71.1 62.76
Solyc02g077670.2.1 Tomato cytosol 71.43 62.68
CDY58657 Canola cytosol 67.77 62.58
KRH21363 Soybean cytosol 63.12 61.69
CDY64940 Canola nucleus 66.78 61.28
KRH12423 Soybean cytoskeleton, cytosol, nucleus 53.49 61.22
CDY68815 Canola cytoskeleton, cytosol, nucleus 67.77 61.08
CDY07893 Canola cytosol 65.45 60.99
CDY27963 Canola cytosol 66.11 60.49
CDY22173 Canola cytosol 67.44 60.42
CDY37986 Canola cytosol 44.52 56.78
CDY20944 Canola cytosol 56.48 55.74
KRH10940 Soybean cytosol 61.13 54.76
KRH21362 Soybean cytosol 60.8 53.82
CDY20637 Canola cytosol 56.81 53.44
CDY36915 Canola cytosol 58.47 52.69
CDX88188 Canola cytosol 56.15 52.65
CDX80523 Canola cytosol 55.81 52.34
CDY54902 Canola cytosol 57.81 52.25
CDY05498 Canola cytosol 57.81 52.25
CDY45143 Canola cytoskeleton, cytosol, nucleus 57.14 51.96
CDX83026 Canola cytosol 56.48 51.83
CDY30900 Canola cytoskeleton, cytosol, nucleus 57.14 51.04
CDX68447 Canola cytosol 57.48 50.44
KRH40259 Soybean cytosol 26.58 50.31
CDY21803 Canola nucleus 54.82 48.82
CDY24146 Canola cytosol 58.14 46.42
CDY59898 Canola endoplasmic reticulum, golgi 34.22 29.68
CDX67894 Canola endoplasmic reticulum, golgi 32.23 29.66
CDX89142 Canola endoplasmic reticulum 33.89 29.39
CDY63310 Canola endoplasmic reticulum 33.89 29.39
CDX76646 Canola golgi 33.22 28.9
CDY11430 Canola golgi 33.22 28.9
CDY66166 Canola plastid 33.22 28.74
CDY14974 Canola nucleus 32.56 28.32
CDX70980 Canola nucleus 36.88 27.27
CDX88812 Canola nucleus 36.88 27.21
CDY65546 Canola nucleus 37.21 26.6
CDX92385 Canola nucleus 36.88 26.3
CDX92386 Canola nucleus 36.88 26.3
CDY09117 Canola nucleus 36.88 26.24
CDY16617 Canola nucleus 16.28 23.56
CDY20589 Canola nucleus 28.57 21.88
CDY20977 Canola nucleus 28.57 21.34
CDX89453 Canola plastid 31.56 21.02
CDY25588 Canola plastid 31.56 20.93
CDX97927 Canola nucleus 28.57 19.86
CDY67277 Canola cytosol, nucleus, plastid 28.24 19.54
CDY45921 Canola mitochondrion 28.57 19.24
CDY58774 Canola plastid 31.89 19.2
CDX87288 Canola plastid 31.89 19.16
CDY63891 Canola cytosol 30.9 19.14
CDY35761 Canola mitochondrion 28.24 19.02
CDY54516 Canola mitochondrion 28.57 18.98
CDX86330 Canola mitochondrion 28.57 18.86
CDX69371 Canola mitochondrion 30.9 18.56
CDX95817 Canola plastid 28.57 17.1
CDX92166 Canola plastid 28.57 17.03
CDX90134 Canola mitochondrion 24.25 16.98
CDY35719 Canola mitochondrion 23.26 14.08
Protein Annotations
Gene3D:1.10.287.110MapMan:19.1.5.2Gene3D:2.60.260.20GO:A0A078EDM1EnsemblPlants:CDX97443ProteinID:CDX97443
ProteinID:CDX97443.1InterPro:DnaJ_CInterPro:DnaJ_domainInterPro:DnaJ_domain_CSGO:GO:0003674GO:GO:0005488
GO:GO:0005515GO:GO:0006457GO:GO:0008150GO:GO:0009987GO:GO:0051082EnsemblPlantsGene:GSBRNA2T00104603001
InterPro:HSP40/DnaJ_pept-bdInterPro:IPR001623InterPro:IPR036869InterPro:J_dom_sfPFAM:PF00226PFAM:PF01556
PRINTS:PR00625ScanProsite:PS00636PFscan:PS50076PANTHER:PTHR24078PANTHER:PTHR24078:SF298SMART:SM00271
SUPFAM:SSF46565SUPFAM:SSF49493UniParc:UPI0004EE5396:::
Description
BnaC08g13080D
Coordinates
chrLK031899:+:688681..690249
Molecular Weight (calculated)
33624.4 Da
IEP (calculated)
9.087
GRAVY (calculated)
-0.541
Length
301 amino acids
Sequence
(BLAST)
001: MGVDYYKALQ VDRSANDDDL KKAHRKLAMK WHPDKNPTNK KDDESKFKQV SEAYDVLSDP QKRALYDQYG EEGLKGNVPL PTAADGPSPF RFNPTSADDL
101: FAEIFGFSSR MFGDDMYASF ARKVDPIENK LPCSLEDLYK GTTKKMKISR ETVDVSGKVM QTEEILTIGV KPGWKKGTKI TFPEKGNEHP GVIPADLVFI
201: INEKPHLVFT REGNDLIVTQ KVSLADALIG YTVNLTTLDG RTLTIPVTNV IHPEYGEVVP KEGMPLQKDQ TKKGNLILKF NVKFPARLSA EQKAGFKKLL
301: G
Best Arabidopsis Sequence Match ( AT4G28480.2 )
(BLAST)
001: MGVDYYKVLQ VDRSANDDDL KKAYRKLAMK WHPDKNPNNK KDAEAKFKQI SEAYDVLSDP QKRAVYDQYG EEGLKGNVPP PNAATSGASY FSTGDGSSSF
101: RFNPRSADDI FAEFFGFSTP FGGGGGGTGG QRFASRMFGD DMYASFGEGA VEEILTIGVK PGWKKGTKIT FPEKGNEHPG VIPADLVFII DEKPHPVFTR
201: EGNDLIVTQK VSLADALTGY TANIATLDGR TLTIPITNVI HPEYEEVVPK EGMPLQKDQT KKGNLRIKFN IKFPARLTAE QKAGFKKLIG
Arabidopsis Description
DNAJ heat shock family protein [Source:UniProtKB/TrEMBL;Acc:O49457]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.