CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35188	Canola	cytosol	90.35	95.37
CDX92876	Canola	cytoskeleton, cytosol, nucleus	83.33	89.62
CDY29908	Canola	cytoskeleton, cytosol, nucleus	83.92	89.41
CDX97443	Canola	cytosol	76.61	87.04
CDY65077	Canola	cytosol	81.29	82.74
CDY13869	Canola	cytosol	81.29	82.25
KRH25647	Soybean	nucleus	78.07	76.5
KRH55895	Soybean	endoplasmic reticulum, nucleus	77.78	75.57
PGSC0003DMT400081223	Potato	cytosol	73.1	73.31
Solyc02g077670.2.1	Tomato	cytosol	73.39	73.18
KRH10937	Soybean	cytosol	72.22	72.86
CDY58657	Canola	cytosol	67.54	70.86
CDY64940	Canola	nucleus	67.84	70.73
CDY68815	Canola	cytoskeleton, cytosol, nucleus	69.01	70.66
CDY07893	Canola	cytosol	66.67	70.59
KRH21363	Soybean	cytosol	62.87	69.81
KRH12423	Soybean	cytoskeleton, cytosol, nucleus	53.51	69.58
CDY22173	Canola	cytosol	68.13	69.35
CDY27963	Canola	cytosol	66.37	69.0
KRH10940	Soybean	cytosol	61.11	62.2
KRH21362	Soybean	cytosol	61.7	62.06
CDY20944	Canola	cytosol	53.8	60.33
CDY37986	Canola	cytosol	40.94	59.32
CDY45143	Canola	cytoskeleton, cytosol, nucleus	56.43	58.31
CDX88188	Canola	cytosol	54.68	58.26
CDX80523	Canola	cytosol	54.39	57.94
CDY20637	Canola	cytosol	54.09	57.81
CDY30900	Canola	cytoskeleton, cytosol, nucleus	56.73	57.57
CDY54902	Canola	cytosol	55.85	57.36
CDY05498	Canola	cytosol	55.85	57.36
CDY36915	Canola	cytosol	55.56	56.89
CDX83026	Canola	cytosol	53.51	55.79
CDX68447	Canola	cytosol	55.56	55.39
KRH40259	Soybean	cytosol	25.73	55.35
CDY21803	Canola	nucleus	52.34	52.96
CDY24146	Canola	cytosol	55.56	50.4
CDX67894	Canola	endoplasmic reticulum, golgi	32.16	33.64
CDY59898	Canola	endoplasmic reticulum, golgi	33.92	33.43
CDX89142	Canola	endoplasmic reticulum	33.63	33.14
CDY63310	Canola	endoplasmic reticulum	33.63	33.14
CDX76646	Canola	golgi	33.33	32.95
CDY11430	Canola	golgi	33.33	32.95
CDY66166	Canola	plastid	29.82	29.31
CDY65546	Canola	nucleus	35.67	28.98
CDY14974	Canola	nucleus	29.24	28.9
CDX92385	Canola	nucleus	35.38	28.67
CDX92386	Canola	nucleus	35.38	28.67
CDX88812	Canola	nucleus	33.92	28.43
CDX70980	Canola	nucleus	33.63	28.26
CDY09117	Canola	nucleus	34.8	28.13
CDY16617	Canola	nucleus	14.33	23.56
CDY20589	Canola	nucleus	26.9	23.41
CDY20977	Canola	nucleus	26.61	22.58
CDX97927	Canola	nucleus	27.78	21.94
CDY67277	Canola	cytosol, nucleus, plastid	27.49	21.61
CDX89453	Canola	plastid	27.78	21.02
CDY25588	Canola	plastid	27.78	20.93
CDY45921	Canola	mitochondrion	26.32	20.13
CDY35761	Canola	mitochondrion	26.02	19.91
CDY58774	Canola	plastid	28.66	19.6
CDX87288	Canola	plastid	28.66	19.56
CDY63891	Canola	cytosol	27.78	19.55
CDY54516	Canola	mitochondrion	25.73	19.43
CDX86330	Canola	mitochondrion	25.73	19.3
CDX69371	Canola	mitochondrion	27.78	18.96
CDX95817	Canola	plastid	25.73	17.5
CDX92166	Canola	plastid	25.73	17.43
CDX90134	Canola	mitochondrion	21.34	16.98
CDY35719	Canola	mitochondrion	20.76	14.29

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.5.2	Gene3D:2.60.260.20	GO:A0A078HNJ6	UniProt:A0A078HNJ6	EnsemblPlants:CDY38388
ProteinID:CDY38388	ProteinID:CDY38388.1	InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082
EnsemblPlantsGene:GSBRNA2T00065812001	InterPro:HSP40/DnaJ_pept-bd	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	PFAM:PF00226
PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR24078	PANTHER:PTHR24078:SF298
SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	UniParc:UPI0004EF193A	SEG:seg	:

Description

BnaC01g09970DBnaC01g09970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HNJ6]

Coordinates

chrLK032423:-:126582..128468

Molecular Weight (calculated)

37807.9 Da

IEP (calculated)

9.570

GRAVY (calculated)

-0.629

Length

342 amino acids

Sequence
(BLAST)

001: MGVDYYKVLQ VDRSASDDDL KKAYRKLAMK WHPDKNPTNK KEAEAKFKQI SEAYDVLSDP QKRAVFDQYG EEGLKGNVPP PNAAGGSSYF SSGDGPSSFR
101: FNPRSADDIF AEFFGFSTPF GGLGRSGAGQ RFASRIFGDD MYGSSFGEGG HPPHHHHHHG AARKVAPIEN KLPCSLEDLY KGTTKKMKIS REIADVSGRT
201: TQTEEILTIG VKPGWKKGTK ITFPEKGNEH PGVIPADLVF IIDEKPHPVF TRDGNDLIVT QKISLAEALT GYTVNITTLD GRTLTIPITN VIHPEYEEVV
301: PKEGMPLQKD QTKKGNLRIK FNIKFPARLT AEQKTGFKKL LG

Best Arabidopsis Sequence Match ( AT4G28480.1 )
(BLAST)

001: MGVDYYKVLQ VDRSANDDDL KKAYRKLAMK WHPDKNPNNK KDAEAKFKQI SEAYDVLSDP QKRAVYDQYG EEGLKGNVPP PNAATSGASY FSTGDGSSSF
101: RFNPRSADDI FAEFFGFSTP FGGGGGGTGG QRFASRMFGD DMYASFGEGA GGGGAMHHHH HHHHHAAARK VAPIENKLPC SLEDLYKGTT KKMKISREIV
201: DVSGKAMQVE EILTIGVKPG WKKGTKITFP EKGNEHPGVI PADLVFIIDE KPHPVFTREG NDLIVTQKVS LADALTGYTA NIATLDGRTL TIPITNVIHP
301: EYEEVVPKEG MPLQKDQTKK GNLRIKFNIK FPARLTAEQK AGFKKLIG

Arabidopsis Description

DNAJ heat shock family protein [Source:UniProtKB/TrEMBL;Acc:O49457]
SUBAcon: [cytoskeleton,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.