CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83026	Canola	cytosol	91.55	95.73
CDY36915	Canola	cytosol	88.34	90.72
CDY21803	Canola	nucleus	84.84	86.09
AT3G47940.1	Thale cress	cytosol	83.38	81.71
CDY24146	Canola	cytosol	86.01	78.25
KRH63415	Soybean	cytosol	32.65	76.19
KRH54495	Soybean	nucleus	70.55	68.95
PGSC0003DMT400083040	Potato	cytosol	66.47	67.66
Solyc06g071110.2.1	Tomato	nucleus	65.89	67.06
VIT_17s0000g05530.t01	Wine grape	cytoskeleton, cytosol, nucleus	67.93	66.76
KRH63417	Soybean	nucleus	37.32	63.05
CDY20944	Canola	cytosol	54.52	61.31
CDY45143	Canola	cytoskeleton, cytosol, nucleus	57.73	59.82
CDY30900	Canola	cytoskeleton, cytosol, nucleus	58.31	59.35
CDY37986	Canola	cytosol	40.52	58.9
CDY20637	Canola	cytosol	54.52	58.44
CDY29908	Canola	cytoskeleton, cytosol, nucleus	54.23	57.94
CDX92876	Canola	cytoskeleton, cytosol, nucleus	53.64	57.86
CDX97443	Canola	cytosol	50.44	57.48
CDY35188	Canola	cytosol	53.94	57.1
CDY58657	Canola	cytosol	53.35	56.13
CDY07893	Canola	cytosol	52.48	55.73
CDY38388	Canola	cytosol	55.39	55.56
CDY68815	Canola	cytoskeleton, cytosol, nucleus	53.94	55.39
CDY13869	Canola	cytosol	54.52	55.33
CDY64940	Canola	nucleus	52.77	55.18
CDY65077	Canola	cytosol	53.94	55.06
CDX88188	Canola	cytosol	51.31	54.83
CDX80523	Canola	cytosol	51.31	54.83
CDY22173	Canola	cytosol	53.64	54.76
CDY27963	Canola	cytosol	51.6	53.8
CDY54902	Canola	cytosol	50.44	51.95
CDY05498	Canola	cytosol	50.44	51.95
CDX67894	Canola	endoplasmic reticulum, golgi	29.45	30.89
CDY63310	Canola	endoplasmic reticulum	30.9	30.55
CDY59898	Canola	endoplasmic reticulum, golgi	30.9	30.55
CDX89142	Canola	endoplasmic reticulum	30.61	30.26
CDY11430	Canola	golgi	30.03	29.77
CDX76646	Canola	golgi	30.03	29.77
CDX70980	Canola	nucleus	32.94	27.76
CDX88812	Canola	nucleus	32.94	27.7
CDY65546	Canola	nucleus	32.94	26.84
CDX92385	Canola	nucleus	32.65	26.54
CDX92386	Canola	nucleus	32.65	26.54
CDY09117	Canola	nucleus	32.36	26.24
CDY20977	Canola	nucleus	30.03	25.56
CDY20589	Canola	nucleus	29.15	25.45
CDY66166	Canola	plastid	24.49	24.14
CDY14974	Canola	nucleus	24.2	23.99
CDX97927	Canola	nucleus	29.74	23.56
CDY67277	Canola	cytosol, nucleus, plastid	29.74	23.45
CDY16617	Canola	nucleus	13.99	23.08
CDX89453	Canola	plastid	25.95	19.69
CDY25588	Canola	plastid	25.95	19.6
CDY35761	Canola	mitochondrion	25.07	19.24
CDY45921	Canola	mitochondrion	24.78	19.02
CDY58774	Canola	plastid	27.7	19.0
CDY54516	Canola	mitochondrion	24.78	18.76
CDX87288	Canola	plastid	27.41	18.76
CDX86330	Canola	mitochondrion	24.49	18.42
CDY63891	Canola	cytosol	25.36	17.9
CDX69371	Canola	mitochondrion	25.07	17.17
CDX90134	Canola	mitochondrion	21.28	16.98
CDX95817	Canola	plastid	24.49	16.7
CDX92166	Canola	plastid	24.2	16.44
CDY35719	Canola	mitochondrion	20.12	13.88

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.5.2	Gene3D:2.60.260.20	GO:A0A078BW63	EnsemblPlants:CDX68447	ProteinID:CDX68447
ProteinID:CDX68447.1	InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	EnsemblPlantsGene:GSBRNA2T00125882001
InterPro:HSP40/DnaJ_pept-bd	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	PFAM:PF00226	PFAM:PF01556
PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR24078	PANTHER:PTHR24078:SF524	SMART:SM00271
SUPFAM:SSF46565	SUPFAM:SSF49493	UniParc:UPI0004EC0D9B	SEG:seg	:	:

Description

BnaC01g25250D

Coordinates

chrLK031788:-:1623698..1625194

Molecular Weight (calculated)

38592.1 Da

IEP (calculated)

9.606

GRAVY (calculated)

-0.738

Length

343 amino acids

Sequence
(BLAST)

001: MGVDYYNMLK VNHNATEDDL KKAYKRLAMI WHPDKNPSTR RDEAEAKFKR ISEAYDVLSD PQKRQIYDLY GEEGLKLGKI PDSNASEASS SYSSRTPHFY
101: HQHRQHPPNA ASFRFNPRDA DDIYAEIFGP EGGGGGGHRT FRDGRFRNGH FNAGGHTSEL RKAPAVENPL PCTLEDLYKG VKKKMRLSRN VYDASGKMRV
201: VDEILPIEIK PGWKKGTKLT FPKKGNEEPG IIPADIIFVV EEKPHPVYKR DGNDLLVSKE ITLLEALTGK TLDLITLDGR NLMIPLTDII NPDHEVVVPN
301: EGMPISKEPG KKGNLRLKLN VRYPSKLTAE HKSELKRVLG GVS

Best Arabidopsis Sequence Match ( AT3G47940.1 )
(BLAST)

001: MGVDYYNILK VNHNATEDDL KKAYKRLAMI WHPDKNPSTR RDEAEAKFKR ISEAYDVLSD PQKRQIYDLY GEEGLKSGKI PNSSSSEASS SSSSSSSRYP
101: HFHQHRPQHP PNASSFRFNP RDAEDIYAEF FGSENGGGSN NAGGRGNRAF RNGHFNTGGA NGYSGEMRKV PAMENPLPVS LEDLYKGVVK KMRITRNVYD
201: ASGRMMVEAE ILPIEIKPGW KKGTKLTFPK KGNEEPGIIP ADIVFVVEEK PHPVYKRDGN DLLVSQEITL LEALTGKTVN LITLDGRTLM IPLTEIIKPD
301: HEIVVPNEGM PISKEPGKKG NLKLKLSVKY PSRLTSDQKF ELKRVLGGVS

Arabidopsis Description

DNAJ heat shock family protein [Source:UniProtKB/TrEMBL;Acc:Q9SU57]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.