CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra030245.1-P	Field mustard	plastid	98.68	99.11
CDX89453	Canola	plastid	97.8	98.23
AT2G22360.1	Thale cress	plastid	90.09	92.53
Solyc01g105340.2.1	Tomato	plastid	62.78	80.74
CDY63891	Canola	cytosol	83.04	77.57
KRH59311	Soybean	plastid	73.35	76.91
KRH43163	Soybean	plastid	73.35	76.2
KRH31310	Soybean	nucleus, plastid	72.91	75.23
KRG97564	Soybean	plastid	72.47	74.77
CDX69371	Canola	mitochondrion	82.38	74.65
PGSC0003DMT400032760	Potato	plastid	71.59	73.03
VIT_00s0324g00040.t01	Wine grape	plastid	76.21	71.93
TraesCS5A01G115000.1	Wheat	plastid	65.42	71.57
GSMUA_Achr1P15780_001	Banana	plastid	69.16	70.56
GSMUA_Achr3P00920_001	Banana	mitochondrion	69.6	69.91
Os05t0334400-01	Rice	mitochondrion, plastid	67.62	68.68
Os05t0334000-01	Rice	mitochondrion, plastid	67.62	68.68
Os05t0333500-01	Rice	mitochondrion, plastid	67.62	68.68
EES13204	Sorghum	plastid	67.4	68.3
Zm00001d047195_P001	Maize	mitochondrion	45.59	62.73
Zm00001d024635_P001	Maize	mitochondrion	67.62	62.27
TraesCS5B01G115900.1	Wheat	plastid	65.64	61.7
Zm00001d049583_P003	Maize	cytosol, mitochondrion, nucleus, plastid	66.96	61.41
GSMUA_Achr4P20410_001	Banana	cytosol	70.26	60.76
TraesCS5D01G125500.1	Wheat	nucleus	65.86	55.58
HORVU5Hr1G037600.2	Barley	cytosol, nucleus	65.64	51.11
CDY58774	Canola	plastid	45.59	41.4
CDX87288	Canola	plastid	45.59	41.32
CDX92166	Canola	plastid	40.09	36.04
CDX95817	Canola	plastid	39.87	35.98
CDY45921	Canola	mitochondrion	32.16	32.66
CDY35761	Canola	mitochondrion	32.16	32.66
CDX97443	Canola	cytosol	20.93	31.56
CDY65077	Canola	cytosol	23.35	31.55
CDY13869	Canola	cytosol	23.35	31.36
CDY20944	Canola	cytosol	20.93	31.15
CDY54516	Canola	mitochondrion	31.06	31.13
CDY37986	Canola	cytosol	16.08	30.93
CDX86330	Canola	mitochondrion	31.06	30.92
CDY29908	Canola	cytoskeleton, cytosol, nucleus	21.59	30.53
CDX92876	Canola	cytoskeleton, cytosol, nucleus	21.37	30.5
CDY35188	Canola	cytosol	21.59	30.25
CDY54902	Canola	cytosol	22.03	30.03
CDY05498	Canola	cytosol	22.03	30.03
CDY20637	Canola	cytosol	20.48	29.06
CDX67894	Canola	endoplasmic reticulum, golgi	20.7	28.75
CDY07893	Canola	cytosol	20.26	28.48
CDY64940	Canola	nucleus	20.48	28.35
CDY27963	Canola	cytosol	20.48	28.27
CDX88188	Canola	cytosol	19.82	28.04
CDX80523	Canola	cytosol	19.82	28.04
CDY11430	Canola	golgi	21.37	28.03
CDX76646	Canola	golgi	21.37	28.03
CDY59898	Canola	endoplasmic reticulum, golgi	21.37	27.95
CDY68815	Canola	cytoskeleton, cytosol, nucleus	20.48	27.84
CDY38388	Canola	cytosol	20.93	27.78
CDY63310	Canola	endoplasmic reticulum	21.15	27.67
CDX89142	Canola	endoplasmic reticulum	21.15	27.67
CDY58657	Canola	cytosol	19.82	27.61
CDY45143	Canola	cytoskeleton, cytosol, nucleus	19.82	27.19
CDX83026	Canola	cytosol	19.6	27.13
CDY30900	Canola	cytoskeleton, cytosol, nucleus	20.04	27.0
CDY22173	Canola	cytosol	19.82	26.79
CDX68447	Canola	cytosol	19.6	25.95
CDX90134	Canola	mitochondrion	24.45	25.81
CDY36915	Canola	cytosol	18.94	25.75
CDY65546	Canola	nucleus	23.13	24.94
CDX92386	Canola	nucleus	23.13	24.88
CDX92385	Canola	nucleus	22.91	24.64
CDY09117	Canola	nucleus	22.91	24.59
CDX70980	Canola	nucleus	21.81	24.32
CDX88812	Canola	nucleus	21.81	24.26
CDY21803	Canola	nucleus	17.62	23.67
CDY24146	Canola	cytosol	18.94	22.81
CDY35719	Canola	mitochondrion	24.23	22.13
CDY14974	Canola	nucleus	13.0	17.05
CDY66166	Canola	plastid	13.0	16.95
CDY20589	Canola	nucleus	12.56	14.5
CDY20977	Canola	nucleus	12.56	14.14
CDX97927	Canola	nucleus	12.33	12.93
CDY67277	Canola	cytosol, nucleus, plastid	12.11	12.64
CDY16617	Canola	nucleus	5.73	12.5

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.4.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	GO:A0A078GLW8	UniProt:A0A078GLW8
EnsemblPlants:CDY25588	ProteinID:CDY25588	ProteinID:CDY25588.1	InterPro:DnaJ	InterPro:DnaJ_C	InterPro:DnaJ_domain
InterPro:DnaJ_domain_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009408	GO:GO:0009628	GO:GO:0009987
GO:GO:0031072	GO:GO:0046872	GO:GO:0051082	EnsemblPlantsGene:GSBRNA2T00032853001	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom
InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	HAMAP:MF_01152
PFAM:PF00226	PFAM:PF00684	PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076
PFscan:PS51188	PANTHER:PTHR43096	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	SUPFAM:SSF57938
TIGRFAMs:TIGR02349	UniParc:UPI0004EEC7A2	SEG:seg	:	:	:

Description

BnaA04g12800DBnaA04g12800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GLW8]

Coordinates

chrLK032177:+:85803..88583

Molecular Weight (calculated)

48795.3 Da

IEP (calculated)

9.710

GRAVY (calculated)

-0.449

Length

454 amino acids

Sequence
(BLAST)

001: MASIQFGSTC VAQWSIRPHF ALRAYHHPSS RLQSSTRQQN SMRSQINCLG ASRSSMFSHG SLPFLSMAGM SRNMQPRRGS RFTVRADADY YSVLGVSKNA
101: TKSEIKSAYR KLARNYHPDV NKEPGAEEKF KEISNAYEVL SDDEKKSLYD RFGEAGVKGA GGMGGMGDFS NPFDLFESLF EGMGGMGGGG GMGRGSRSRA
201: VDGQDEYYSL ILNFKEAVFG MEKEIEITRL ESCGTCEGSG AKPGTKPTKC TTCGGQGQVV SSARTPLGVF QQVMTCSSCN GTGEISTPCG TCSGDGRVRK
301: TKRISLKVPA GVDSGSRLRV RGEGNAGKKG GSPGDLFVVI EVIPDPVLKR EDTNILYTCK ISYIDAILGT TLKVPTVDGT VDLKVPAGTQ PGTTLVMAKK
401: GVPVLNKSNM RGDQLVRVQV EIPKRLSKEE KKLIEELADM SKNKTANSSS SSVR

Best Arabidopsis Sequence Match ( AT2G22360.1 )
(BLAST)

001: MAIIQLGSTC VAQWSIRPQF AVRAYYPSRI ESTRHQNSSS QVNCLGASKS SMFSHGSLPF LSMTGMSRNM HPPRRGSRFT VRADADYYSV LGVSKNATKA
101: EIKSAYRKLA RNYHPDVNKD PGAEEKFKEI SNAYEVLSDD EKKSLYDRYG EAGLKGAAGF GNGDFSNPFD LFDSLFEGFG GGMGRGSRSR AVDGQDEYYT
201: LILNFKEAVF GMEKEIEISR LESCGTCEGS GAKPGTKPTK CTTCGGQGQV VSAARTPLGV FQQVMTCSSC NGTGEISTPC GTCSGDGRVR KTKRISLKVP
301: AGVDSGSRLR VRGEGNAGKR GGSPGDLFVV IEVIPDPILK RDDTNILYTC KISYIDAILG TTLKVPTVDG TVDLKVPAGT QPSTTLVMAK KGVPVLNKSN
401: MRGDQLVRVQ VEIPKRLSKE EKKLIEELAD MSKNKTANST SR

Arabidopsis Description

DJA6Chaperone protein dnaJ A6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SJZ7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.