Factsheet for GSMUA_Achr3P00920_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P15780_001	Banana	plastid	84.96	86.29
Solyc01g105340.2.1	Tomato	plastid	64.16	82.15
TraesCS5A01G115000.1	Wheat	plastid	73.67	80.24
Os05t0333500-01	Rice	mitochondrion, plastid	75.44	76.29
Os05t0334000-01	Rice	mitochondrion, plastid	75.44	76.29
Os05t0334400-01	Rice	mitochondrion, plastid	75.44	76.29
EES13204	Sorghum	plastid	75.0	75.67
PGSC0003DMT400032760	Potato	plastid	72.79	73.93
GSMUA_Achr4P20410_001	Banana	cytosol	85.18	73.33
KRH59311	Soybean	plastid	68.58	71.59
KRH31310	Soybean	nucleus, plastid	69.47	71.36
KRG97564	Soybean	plastid	69.47	71.36
KRH43163	Soybean	plastid	68.58	70.94
VIT_00s0324g00040.t01	Wine grape	plastid	74.34	69.85
CDY25588	Canola	plastid	69.91	69.6
CDX89453	Canola	plastid	69.47	69.47
Bra030245.1-P	Field mustard	plastid	69.47	69.47
AT2G22360.1	Thale cress	plastid	67.7	69.23
Zm00001d024635_P001	Maize	mitochondrion	75.44	69.17
TraesCS5B01G115900.1	Wheat	plastid	73.67	68.94
AT4G39960.1	Thale cress	mitochondrion, plastid	67.7	68.46
Zm00001d049583_P003	Maize	cytosol, mitochondrion, nucleus, plastid	74.56	68.08
Zm00001d047195_P001	Maize	mitochondrion	49.12	67.27
TraesCS5D01G125500.1	Wheat	nucleus	74.11	62.27
CDY63891	Canola	cytosol	66.37	61.73
CDX69371	Canola	mitochondrion	66.59	60.08
HORVU5Hr1G037600.2	Barley	cytosol, nucleus	73.67	57.12
Bra011820.1-P	Field mustard	cytosol	66.37	56.71
GSMUA_Achr11P...	Banana	plastid	44.47	41.02
GSMUA_AchrUn_...	Banana	cytosol	11.95	36.0
GSMUA_AchrUn_...	Banana	cytosol	23.01	34.78
GSMUA_Achr6P13820_001	Banana	cytosol	12.61	33.33
GSMUA_Achr9P29030_001	Banana	mitochondrion, plastid	39.16	32.48
GSMUA_Achr4P11580_001	Banana	mitochondrion	32.08	32.08
GSMUA_Achr3P00410_001	Banana	mitochondrion	31.86	32.0
GSMUA_Achr8P16030_001	Banana	cytosol	23.23	31.72
GSMUA_Achr3P15480_001	Banana	cytosol	19.91	30.82
GSMUA_Achr4P12330_001	Banana	nucleus	22.35	30.79
GSMUA_AchrUn_...	Banana	cytosol	21.24	29.72
GSMUA_Achr2P19740_001	Banana	cytosol	20.8	29.19
GSMUA_Achr1P01630_001	Banana	cytosol	15.27	29.11
GSMUA_Achr8P33890_001	Banana	endoplasmic reticulum	21.68	28.49
GSMUA_Achr4P12400_001	Banana	mitochondrion	29.2	28.21
GSMUA_Achr9P23300_001	Banana	cytosol	21.46	28.2
GSMUA_Achr6P02160_001	Banana	mitochondrion	28.98	27.7
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, vacuole	22.79	27.61
GSMUA_Achr4P22790_001	Banana	cytosol	25.44	27.51
GSMUA_Achr8P11020_001	Banana	nucleus	24.34	27.5
GSMUA_Achr11P...	Banana	cytosol	23.01	27.3
GSMUA_Achr4P31390_001	Banana	cytosol	25.0	27.16
GSMUA_Achr6P29960_001	Banana	nucleus	24.78	27.05
GSMUA_Achr11P...	Banana	cytosol	22.12	26.74
GSMUA_Achr7P01290_001	Banana	nucleus	24.34	26.38
GSMUA_Achr9P25940_001	Banana	nucleus	24.11	26.14
GSMUA_Achr6P15600_001	Banana	cytosol	23.23	23.76
GSMUA_Achr7P03030_001	Banana	cytosol	15.04	21.38
GSMUA_Achr8P32540_001	Banana	mitochondrion	7.3	11.87

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.4.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	InterPro:DnaJ	InterPro:DnaJ_C
InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009408	GO:GO:0009628
GO:GO:0009987	GO:GO:0031072	GO:GO:0046872	GO:GO:0051082	EnsemblPlantsGene:GSMUA_Achr3G00920_001	EnsemblPlants:GSMUA_Achr3P00920_001
EnsemblPlants:GSMUA_Achr3T00920_001	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	UniProt:M0SAR0	HAMAP:MF_01152	PFAM:PF00226	PFAM:PF00684
PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PFscan:PS51188	PANTHER:PTHR43096
SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	SUPFAM:SSF57938	TIGRFAMs:TIGR02349	UniParc:UPI0002961EBC
SEG:seg	:	:	:	:	:

Description

Chaperone protein dnaJ [Source:GMGC_GENE;Acc:GSMUA_Achr3G00920_001]

Coordinates

chr3:-:696156..703875

Molecular Weight (calculated)

48616.3 Da

IEP (calculated)

9.625

GRAVY (calculated)

-0.380

Length

452 amino acids

Sequence
(BLAST)

001: MAIVLCRGTY VPQLGVQPQA TLRNASPGSW PCCITKLVLM PQISTSTSKY LASSHASFLA PVSSSALFYN GPHLNSRRNR GARFIVRADL DYYSVLGVSR
101: NASKSEIKTY RKLARSYHPD VNKEPGAEQK FKEISNVYEV LSDDEKRSIY DKYGEAGLKG AGMGTGDYGN PFDIFESLFE GMGGMGGMGG MGGARAARNR
201: PMQGDDESYN LVLNFKDAIF GVEKEIEITR LERCGTCDGS GAKPGTTPSK CNTCGGQGQV VSSARTPLGV FQQVMTCSTC SGTGESSTPC SSCGGDGCVR
301: KTKRISLKVP AGVDSGSRLR VRSEGNAGRR GGPPGNLYVF IEVLSDPVLK RDGTNILYTC KVSYIDAILG TTMKVPTVEG KVDLKIPAGT QPGTTLVMAK
401: KGVPYLGKPN MRGDQLVRVQ VEIPKRLSSE EKKLIEELSN LSKFKTANSR RQ

Best Arabidopsis Sequence Match ( AT2G22360.1 )
(BLAST)

001: MAIIQLGSTC VAQWSIRPQF AVRAYYPSRI ESTRHQNSSS QVNCLGASKS SMFSHGSLPF LSMTGMSRNM HPPRRGSRFT VRADADYYSV LGVSKNATKA
101: EIKSAYRKLA RNYHPDVNKD PGAEEKFKEI SNAYEVLSDD EKKSLYDRYG EAGLKGAAGF GNGDFSNPFD LFDSLFEGFG GGMGRGSRSR AVDGQDEYYT
201: LILNFKEAVF GMEKEIEISR LESCGTCEGS GAKPGTKPTK CTTCGGQGQV VSAARTPLGV FQQVMTCSSC NGTGEISTPC GTCSGDGRVR KTKRISLKVP
301: AGVDSGSRLR VRGEGNAGKR GGSPGDLFVV IEVIPDPILK RDDTNILYTC KISYIDAILG TTLKVPTVDG TVDLKVPAGT QPSTTLVMAK KGVPVLNKSN
401: MRGDQLVRVQ VEIPKRLSKE EKKLIEELAD MSKNKTANST SR

Arabidopsis Description

DJA6Chaperone protein dnaJ A6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SJZ7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.