Factsheet for GSMUA_Achr11P06760_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0804500-01	Rice	plastid	71.02	71.46
VIT_09s0002g07210.t01	Wine grape	plastid	70.0	70.14
TraesCS6A01G372700.1	Wheat	plastid	68.98	69.26
TraesCS6D01G356800.1	Wheat	plastid	68.37	68.93
TraesCS6B01G410600.1	Wheat	plastid	68.57	68.15
KXG31305	Sorghum	plastid	68.98	68.01
KRH09715	Soybean	nucleus, plastid	66.94	66.53
Solyc03g116790.2.1	Tomato	plastid	65.1	64.06
AT1G80030.2	Thale cress	plastid	64.9	63.6
HORVU0Hr1G017450.8	Barley	cytosol	62.24	63.02
CDY58774	Canola	plastid	64.29	63.0
CDX87288	Canola	plastid	64.29	62.87
Bra035201.1-P	Field mustard	plastid	64.29	62.87
KRH23590	Soybean	nucleus	45.31	62.18
KRH44477	Soybean	plastid	55.92	61.71
Zm00001d018413_P003	Maize	mitochondrion	67.55	58.17
Zm00001d052001_P002	Maize	plastid	67.76	54.07
GSMUA_Achr1P15780_001	Banana	plastid	41.22	45.39
GSMUA_Achr3P00920_001	Banana	mitochondrion	41.02	44.47
GSMUA_Achr4P20410_001	Banana	cytosol	41.22	38.48
GSMUA_AchrUn_...	Banana	cytosol	11.02	36.0
GSMUA_AchrUn_...	Banana	cytosol	21.63	35.45
GSMUA_Achr9P29030_001	Banana	mitochondrion, plastid	39.18	35.23
GSMUA_Achr6P13820_001	Banana	cytosol	12.24	35.09
GSMUA_Achr3P15480_001	Banana	cytosol	19.39	32.53
GSMUA_Achr8P16030_001	Banana	cytosol	21.84	32.33
GSMUA_Achr4P12330_001	Banana	nucleus	20.61	30.79
GSMUA_Achr4P11580_001	Banana	mitochondrion	28.37	30.75
GSMUA_Achr2P19740_001	Banana	cytosol	19.39	29.5
GSMUA_Achr11P...	Banana	cytosol	22.65	29.13
GSMUA_Achr3P00410_001	Banana	mitochondrion	26.53	28.89
GSMUA_Achr8P11020_001	Banana	nucleus	23.06	28.25
GSMUA_Achr9P25940_001	Banana	nucleus	23.88	28.06
GSMUA_Achr8P33890_001	Banana	endoplasmic reticulum	19.59	27.91
GSMUA_Achr4P31390_001	Banana	cytosol	23.67	27.88
GSMUA_AchrUn_...	Banana	cytosol	18.16	27.55
GSMUA_Achr1P01630_001	Banana	cytosol	13.27	27.43
GSMUA_Achr6P29960_001	Banana	nucleus	23.06	27.29
GSMUA_Achr6P02160_001	Banana	mitochondrion	26.33	27.27
GSMUA_Achr4P22790_001	Banana	cytosol	23.27	27.27
GSMUA_Achr9P23300_001	Banana	cytosol	18.98	27.03
GSMUA_Achr11P...	Banana	cytosol	20.41	26.74
GSMUA_Achr7P01290_001	Banana	nucleus	22.65	26.62
GSMUA_Achr4P12400_001	Banana	mitochondrion	25.1	26.28
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, vacuole	19.8	26.01
GSMUA_Achr6P15600_001	Banana	cytosol	21.22	23.53
GSMUA_Achr7P03030_001	Banana	cytosol	13.27	20.44
GSMUA_Achr8P32540_001	Banana	mitochondrion	6.53	11.51

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.4.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	InterPro:DnaJ	InterPro:DnaJ_C
InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006457
GO:GO:0006950	GO:GO:0008150	GO:GO:0009408	GO:GO:0009507	GO:GO:0009535	GO:GO:0009536
GO:GO:0009579	GO:GO:0009628	GO:GO:0009941	GO:GO:0009987	GO:GO:0016020	GO:GO:0031072
GO:GO:0046872	GO:GO:0051082	EnsemblPlantsGene:GSMUA_Achr11G06760_001	EnsemblPlants:GSMUA_Achr11P06760_001	EnsemblPlants:GSMUA_Achr11T06760_001	InterPro:HSP40/DnaJ_pept-bd
InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf
UniProt:M0RQ06	HAMAP:MF_01152	PFAM:PF00226	PFAM:PF00684	PFAM:PF01556	PRINTS:PR00625
ScanProsite:PS00636	PFscan:PS50076	PFscan:PS51188	PANTHER:PTHR43096	PANTHER:PTHR43096:SF22	SMART:SM00271
SUPFAM:SSF46565	SUPFAM:SSF49493	SUPFAM:SSF57938	TIGRFAMs:TIGR02349	UniParc:UPI0002964528	SEG:seg

Description

Chaperone protein dnaJ [Source:GMGC_GENE;Acc:GSMUA_Achr11G06760_001]

Coordinates

chr11:-:5341828..5354601

Molecular Weight (calculated)

53134.3 Da

IEP (calculated)

9.653

GRAVY (calculated)

-0.420

Length

490 amino acids

Sequence
(BLAST)

001: MALSLSSISV IVPPSKPSSC SFRSRGLDLS RRAHLRSAAF SVDPSLALRQ RRKARRRGRG DGFTSFVSAS ADYYSTLGVP KSASAKEIKA AYRRLARQYH
101: PDVNKQPGAT EKFKEISTAY EVLSDDKKRA LYDQYGEAGV KSGVGGPAGA YTTNPFDLFE TFFGASMGGF SGMDQTTFRT RRYGAAVKGE DIRYDITLEF
201: PEAIFGGERE IILSHLETCD ACTGTGSKIG SKMRICATCG GRGQVMRTEQ TPFGLFSQVS ICPTCGGEGE TISEYCRKCA GEGRLRVRKD IKVKIPPGVS
301: KGSTLRVRGE GDAGLKGGPP GDLYVCLDIK EIPEIQRDGI NLCSTVTINY IEAILGTTVK VKTVDGINEL QIPPGTQPGD VVVLAKKGVP KLNKPSIRGD
401: HLFTIKVTIP NRISGKEREL LEELASLSRD SVSRASPRTS TKAQVNRAES QKSLEAEESE KPSQNDFWQS LKDFAGSVAN GALKWLKDNL

Best Arabidopsis Sequence Match ( AT1G80030.1 )
(BLAST)

001: MAALASPSLI PSSLCFAAAA DGPRSLSSNF SAFSDGGSNF RYHKSFLSLS SSSSSSTPYR NRRGRSLVVF ATSGDYYATL GVSKSANNKE IKAAYRRLAR
101: QYHPDVNKEP GATEKFKEIS AAYEVLSDEQ KRALYDQYGE AGVKSTVGGA SGPYTSNPFD LFETFFGASM GGFPGMDQAD FGRTRRSRVT KGEDLRYDIT
201: LELSEAIFGS EKEFDLTHLE TCEACAGTGA KAGSKMRICS TCGGRGQVMR TEQTPFGMFS QVSICPNCGG DGEVISENCR KCSGEGRVRI KKSIKVKIPP
301: GVSAGSILRV AGEGDSGPRG GPPGDLYVYL DVEDVRGIER DGINLLSTLS ISYLDAILGA VVKVKTVEGD TELQIPPGTQ PGDVLVLAKK GVPKLNRPSI
401: RGDHLFTVKV SVPNQISAGE RELLEELASL KDTSSNRSRT RAKPQQPSTL STAPSGSENK KDEVKEENEE PEQENYLWNN IKEFAGSVAN GALKWLRDNL

Arabidopsis Description

Molecular chaperone Hsp40/DnaJ family protein [Source:UniProtKB/TrEMBL;Acc:Q0WN54]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.