Factsheet for GSMUA_Achr2P19740_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P16030_001	Banana	cytosol	81.06	78.85
GSMUA_Achr3P15480_001	Banana	cytosol	69.88	77.05
Os02t0306900-01	Rice	cytosol	74.53	68.77
GSMUA_Achr11P...	Banana	cytosol	78.88	67.91
Zm00001d016440_P001	Maize	cytosol	71.12	66.19
EES02163	Sorghum	cytosol	68.94	65.88
Zm00001d009027_P001	Maize	cytosol	68.32	65.48
TraesCS3D01G168500.1	Wheat	cytosol	68.63	64.06
TraesCS3B01G192300.1	Wheat	cytosol	68.32	63.77
TraesCS3A01G161200.1	Wheat	nucleus	67.7	63.19
Os01t0239100-02	Rice	cytoskeleton, cytosol, nucleus	67.08	61.89
GSMUA_AchrUn_...	Banana	cytosol	57.14	61.54
GSMUA_Achr4P12330_001	Banana	nucleus	55.9	54.88
HORVU3Hr1G032480.1	Barley	cytosol, nucleus	69.57	52.09
GSMUA_Achr9P23300_001	Banana	cytosol	54.97	51.45
Zm00001d039259_P001	Maize	nucleus	68.32	51.04
GSMUA_AchrUn_...	Banana	cytosol	49.38	49.23
GSMUA_Achr6P15600_001	Banana	cytosol	63.98	46.61
GSMUA_Achr6P13820_001	Banana	cytosol	24.22	45.61
GSMUA_AchrUn_...	Banana	cytosol	16.46	35.33
GSMUA_Achr7P03030_001	Banana	cytosol	33.23	33.65
GSMUA_Achr11P...	Banana	cytosol	36.34	30.71
GSMUA_Achr8P33890_001	Banana	endoplasmic reticulum	31.37	29.36
GSMUA_Achr9P25940_001	Banana	nucleus	36.65	28.3
GSMUA_Achr4P31390_001	Banana	cytosol	36.34	28.12
GSMUA_Achr8P11020_001	Banana	nucleus	34.47	27.75
GSMUA_Achr6P29960_001	Banana	nucleus	35.4	27.54
GSMUA_Achr7P01290_001	Banana	nucleus	35.4	27.34
GSMUA_Achr4P22790_001	Banana	cytosol	35.4	27.27
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, vacuole	31.37	27.08
GSMUA_Achr8P32540_001	Banana	mitochondrion	22.67	26.26
GSMUA_Achr1P01630_001	Banana	cytosol	18.94	25.74
GSMUA_Achr1P15780_001	Banana	plastid	29.81	21.57
GSMUA_Achr3P00920_001	Banana	mitochondrion	29.19	20.8
GSMUA_Achr11P...	Banana	plastid	29.5	19.39
GSMUA_Achr4P20410_001	Banana	cytosol	29.81	18.29
GSMUA_Achr4P11580_001	Banana	mitochondrion	25.47	18.14
GSMUA_Achr6P02160_001	Banana	mitochondrion	24.84	16.91
GSMUA_Achr3P00410_001	Banana	mitochondrion	23.6	16.89
GSMUA_Achr4P12400_001	Banana	mitochondrion	23.6	16.24
GSMUA_Achr9P29030_001	Banana	mitochondrion, plastid	26.71	15.78

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.5.2	Gene3D:2.20.25.170	Gene3D:2.60.260.20	InterPro:DnaJ_C	InterPro:DnaJ_domain
InterPro:DnaJ_domain_CS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006457	GO:GO:0008150
GO:GO:0009987	GO:GO:0051082	EnsemblPlantsGene:GSMUA_Achr2G19740_001	EnsemblPlants:GSMUA_Achr2P19740_001	EnsemblPlants:GSMUA_Achr2T19740_001	InterPro:HSP40/DnaJ_pept-bd
InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	UniProt:M0S9G5	PFAM:PF00226	PFAM:PF01556
PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR24078	PANTHER:PTHR24078:SF520	SMART:SM00271
SUPFAM:SSF46565	SUPFAM:SSF49493	UniParc:UPI000295A4DA	SEG:seg	:	:

Description

Putative DnaJ homolog subfamily B member 13 [Source:GMGC_GENE;Acc:GSMUA_Achr2G19740_001]

Coordinates

chr2:-:19723213..19726752

Molecular Weight (calculated)

35484.6 Da

IEP (calculated)

9.877

GRAVY (calculated)

-0.554

Length

322 amino acids

Sequence
(BLAST)

001: MGVDYYKILS VDRNAKDDDL KKAYRKLAMR WHPDKNPNNK KDAEAKFKQI SEAYEVLSDP QKRAVYDQYG EDGLKGQVPS PGAGDPGGGS TFFSAAGNGP
101: ASGVRGGSRF PGGMDGMFGN DFFGSAFGGG REGASMYAQQ PRKAAPIENR LPCSLEDLFK GTAKKMKISR EIVEASRKTM TVEEILTINI KPGWKKGTKI
201: TFPEKGNEAP YVIPADIVFI IDEKPHDVFT REGNDLIVTL KISLVEALTG YTVHLTTLDG RSLTIPINSI IHPGYEEVVH REGMPVPKDP SRKGNLRIKF
301: NIKFPTRLTH EQKAGIKRLL AQ

Best Arabidopsis Sequence Match ( AT2G20560.1 )
(BLAST)

001: MGVDYYKVLQ VDRSASDDDL KKAYRKLAMK WHPDKNPNNK KDAEAMFKQI SEAYEVLSDP QKKAVYDQYG EEGLKGNVPP PDAGGATYFS TGDGPTSFRF
101: NPRNADDIFA EFFGFSSPFG GGRGGTRFSS SMFGDNMFAS FGEGGGGGGG SMHHGGARKA APIENKLPCS LEDLYKGTTK KMRISREIAD VSGKTMQVEE
201: ILTIDVKPGW KKGTKITFPE KGNEQPGVIP ADLVFIIDEK PHPVFTREGN DLIVTQKISL VEALTGYTVN LTTLDGRRLT IPVTNVVHPE YEEVVPKEGM
301: PLQKDQTKRG NLRIKFNIKF PTRLTSEQKT GVKKLLG

Arabidopsis Description

At2g20560/T13C7.15 [Source:UniProtKB/TrEMBL;Acc:Q9SIL3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.