Factsheet for Os02t0306900-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
cytosol 2
mitochondrion 2
golgi 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d016440_P001	Maize	cytosol	84.53	85.26
GSMUA_Achr8P16030_001	Banana	cytosol	76.79	80.97
GSMUA_Achr2P19740_001	Banana	cytosol	68.77	74.53
Os05t0562300-01	Rice	nucleus	72.78	70.17
Os01t0239100-02	Rice	cytoskeleton, cytosol, nucleus	67.91	67.91
GSMUA_Achr11P...	Banana	cytosol	70.2	65.51
Os08t0161900-01	Rice	cytosol	55.3	56.43
Os02t0128400-01	Rice	cytosol	46.7	48.08
Os08t0374400-00	Rice	plastid	43.84	39.33
Os05t0427900-01	Rice	cytosol	17.48	38.61
Os05t0156500-01	Rice	cytosol, nucleus	15.19	36.3
Os01t0875700-01	Rice	cytosol	33.52	35.78
Os03t0648400-02	Rice	nucleus	34.38	28.78
Os04t0549600-01	Rice	cytosol	33.81	28.37
Os03t0787300-01	Rice	plasma membrane	33.81	28.3
Os02t0656500-01	Rice	nucleus	33.24	27.62
Os05t0333500-01	Rice	mitochondrion, plastid	29.8	23.27
Os05t0334000-01	Rice	mitochondrion, plastid	29.8	23.27
Os05t0334400-01	Rice	mitochondrion, plastid	29.8	23.27
Os12t0619100-00	Rice	cytosol	28.65	23.26
Os02t0804500-01	Rice	plastid	29.8	21.36
Os12t0168400-01	Rice	plastid	25.21	21.0
Os06t0116800-01	Rice	mitochondrion	26.36	20.81

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.5.2	Gene3D:2.60.260.20	EntrezGene:4329116	EMBL:AF140490	EMBL:AK070441
ProteinID:BAD23586.1	ProteinID:BAF08554.1	ProteinID:BAS78292.1	ncoils:Coil	InterPro:DnaJ_C	InterPro:DnaJ_domain
InterPro:DnaJ_domain_CS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005788	GO:GO:0006457	GO:GO:0008150
GO:GO:0009987	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf
EnsemblPlantsGene:Os02g0306900	EnsemblPlants:Os02t0306900-01	PFAM:PF00226	PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636
PFscan:PS50076	PANTHER:PTHR24078	PANTHER:PTHR24078:SF520	UniProt:Q9XFD9	SMART:SM00271	SUPFAM:SSF46565
SUPFAM:SSF49493	UniParc:UPI00003B06C4	RefSeq:XP_015625804.1	SEG:seg	:	:

Description

DnaJ domain protein B4Similar to DnaJ-like protein. (Os02t0306900-01)

Coordinates

chr2:+:12019034..12023287

Molecular Weight (calculated)

38542.1 Da

IEP (calculated)

9.085

GRAVY (calculated)

-0.565

Length

349 amino acids

Sequence
(BLAST)

001: MGVDYYKLLQ VERGATEEEL KKAYRKLAMK WHPDKNPNSK KEAEAKFKQI SEAYEVLSDS QKRAVYDQYG EEGLKGQVPP PGAGGPGGSS YYGGDGSTFR
101: FNPRSADDIF AEFFGFSSPF SSMGGMGGMG GGVDRGMRGS KFGMYDNDIF GSFSQFPGEA SMHAPQRPQK AAPIENRLPC NLADLYKGTT KKMKISREIL
201: DSSGRTMVVE EILTIDIKPG WKKGTKITFP EKGNESPHVI PADIVFVIDE KPHDLFTREG NDLVMTQKIS LAEALTGCTV QVTALDGRNL TVPINNVVYP
301: GYEEVVLREG MPIPKDPSKK GNLRIKFNIK FPSRLTSEQK SEIKRLLAS

Best Arabidopsis Sequence Match ( AT2G20560.1 )
(BLAST)

001: MGVDYYKVLQ VDRSASDDDL KKAYRKLAMK WHPDKNPNNK KDAEAMFKQI SEAYEVLSDP QKKAVYDQYG EEGLKGNVPP PDAGGATYFS TGDGPTSFRF
101: NPRNADDIFA EFFGFSSPFG GGRGGTRFSS SMFGDNMFAS FGEGGGGGGG SMHHGGARKA APIENKLPCS LEDLYKGTTK KMRISREIAD VSGKTMQVEE
201: ILTIDVKPGW KKGTKITFPE KGNEQPGVIP ADLVFIIDEK PHPVFTREGN DLIVTQKISL VEALTGYTVN LTTLDGRRLT IPVTNVVHPE YEEVVPKEGM
301: PLQKDQTKRG NLRIKFNIKF PTRLTSEQKT GVKKLLG

Arabidopsis Description

At2g20560/T13C7.15 [Source:UniProtKB/TrEMBL;Acc:Q9SIL3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.