Factsheet for GSMUA_Achr8P16030_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 1
mitochondrion 2
golgi 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P19740_001	Banana	cytosol	78.85	81.06
GSMUA_Achr3P15480_001	Banana	cytosol	70.69	80.14
Os02t0306900-01	Rice	cytosol	80.97	76.79
GSMUA_Achr11P...	Banana	cytosol	84.89	75.13
Zm00001d016440_P001	Maize	cytosol	77.34	73.99
EES02163	Sorghum	cytosol	74.02	72.7
Zm00001d009027_P001	Maize	cytosol	72.81	71.73
TraesCS3B01G192300.1	Wheat	cytosol	74.62	71.59
TraesCS3D01G168500.1	Wheat	cytosol	74.62	71.59
TraesCS3A01G161200.1	Wheat	nucleus	73.41	70.43
Os01t0239100-02	Rice	cytoskeleton, cytosol, nucleus	73.11	69.34
GSMUA_AchrUn_...	Banana	cytosol	62.24	68.9
GSMUA_Achr4P12330_001	Banana	nucleus	61.03	61.59
GSMUA_Achr9P23300_001	Banana	cytosol	60.73	58.43
HORVU3Hr1G032480.1	Barley	cytosol, nucleus	75.83	58.37
Zm00001d039259_P001	Maize	nucleus	72.21	55.45
GSMUA_Achr6P13820_001	Banana	cytosol	27.19	52.63
GSMUA_AchrUn_...	Banana	cytosol	51.06	52.32
GSMUA_Achr6P15600_001	Banana	cytosol	67.37	50.45
GSMUA_AchrUn_...	Banana	cytosol	18.73	41.33
GSMUA_Achr7P03030_001	Banana	cytosol	33.53	34.91
GSMUA_Achr8P33890_001	Banana	endoplasmic reticulum	35.05	33.72
GSMUA_Achr11P...	Banana	cytosol	37.76	32.81
GSMUA_Achr6P29960_001	Banana	nucleus	39.58	31.64
GSMUA_Achr4P31390_001	Banana	cytosol	39.58	31.49
GSMUA_Achr9P25940_001	Banana	nucleus	39.58	31.41
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, vacuole	34.74	30.83
GSMUA_Achr4P22790_001	Banana	cytosol	38.67	30.62
GSMUA_Achr8P11020_001	Banana	nucleus	36.86	30.5
GSMUA_Achr7P01290_001	Banana	nucleus	38.07	30.22
GSMUA_Achr1P01630_001	Banana	cytosol	20.54	28.69
GSMUA_Achr8P32540_001	Banana	mitochondrion	23.26	27.7
GSMUA_Achr3P00920_001	Banana	mitochondrion	31.72	23.23
GSMUA_Achr1P15780_001	Banana	plastid	31.12	23.15
GSMUA_Achr11P...	Banana	plastid	32.33	21.84
GSMUA_Achr4P11580_001	Banana	mitochondrion	27.19	19.91
GSMUA_Achr3P00410_001	Banana	mitochondrion	26.89	19.78
GSMUA_Achr4P20410_001	Banana	cytosol	30.82	19.43
GSMUA_Achr4P12400_001	Banana	mitochondrion	25.98	18.38
GSMUA_Achr6P02160_001	Banana	mitochondrion	25.08	17.55
GSMUA_Achr9P29030_001	Banana	mitochondrion, plastid	28.7	17.43

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.5.2	Gene3D:2.60.260.20	ncoils:Coil	InterPro:DnaJ_C	InterPro:DnaJ_domain
InterPro:DnaJ_domain_CS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006457	GO:GO:0008150
GO:GO:0009987	GO:GO:0051082	EnsemblPlantsGene:GSMUA_Achr8G16030_001	EnsemblPlants:GSMUA_Achr8P16030_001	EnsemblPlants:GSMUA_Achr8T16030_001	InterPro:HSP40/DnaJ_pept-bd
InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	UniProt:M0TQV6	PFAM:PF00226	PFAM:PF01556
PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR24078	PANTHER:PTHR24078:SF520	SMART:SM00271
SUPFAM:SSF46565	SUPFAM:SSF49493	UniParc:UPI00029687FC	SEG:seg	:	:

Description

Putative DnaJ homolog subfamily B member 13 [Source:GMGC_GENE;Acc:GSMUA_Achr8G16030_001]

Coordinates

chr8:+:13828877..13833860

Molecular Weight (calculated)

36518.7 Da

IEP (calculated)

8.784

GRAVY (calculated)

-0.502

Length

331 amino acids

Sequence
(BLAST)

001: MGVDYYRVLG VDKSAKDDDL KKAYRKLAMK WHPDKNPNNK KEAEAKFKQI SEAYEVLSDS QKRVIYDQYG EEGLKGQVPP PGAGGFGSGS DGPTSFRFNP
101: RSADDIFAEF FGFSSPFPGG MGGMGGMFGD DIFGSAFGAG EGASMNYQQP RKAAPIENRL PCSLEDLYKG TTKKMKISRE IVDASGKIMT VEEILTIDIK
201: PGWKKGTKIT FPEKGNESPN VIPADIVFII DEKPHDVFTR EGNDLIVTQK ISLVEALTGY TVHLTTLDSR SLTIPINSVI HPGYEEVVSR EGMPIPKDPS
301: RKGNLRIKFD IRFPSRLTSE QKVGIKRLLA P

Best Arabidopsis Sequence Match ( AT2G20560.1 )
(BLAST)

001: MGVDYYKVLQ VDRSASDDDL KKAYRKLAMK WHPDKNPNNK KDAEAMFKQI SEAYEVLSDP QKKAVYDQYG EEGLKGNVPP PDAGGATYFS TGDGPTSFRF
101: NPRNADDIFA EFFGFSSPFG GGRGGTRFSS SMFGDNMFAS FGEGGGGGGG SMHHGGARKA APIENKLPCS LEDLYKGTTK KMRISREIAD VSGKTMQVEE
201: ILTIDVKPGW KKGTKITFPE KGNEQPGVIP ADLVFIIDEK PHPVFTREGN DLIVTQKISL VEALTGYTVN LTTLDGRRLT IPVTNVVHPE YEEVVPKEGM
301: PLQKDQTKRG NLRIKFNIKF PTRLTSEQKT GVKKLLG

Arabidopsis Description

At2g20560/T13C7.15 [Source:UniProtKB/TrEMBL;Acc:Q9SIL3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.