Factsheet for Zm00001d039259_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES02163	Sorghum	cytosol	72.16	92.28
Zm00001d009027_P001	Maize	cytosol	71.0	91.07
Os01t0239100-02	Rice	cytoskeleton, cytosol, nucleus	61.25	75.64
TraesCS3A01G161200.1	Wheat	nucleus	59.86	74.78
TraesCS3B01G192300.1	Wheat	cytosol	59.86	74.78
TraesCS3D01G168500.1	Wheat	cytosol	59.86	74.78
GSMUA_Achr8P16030_001	Banana	cytosol	55.45	72.21
GSMUA_Achr2P19740_001	Banana	cytosol	51.04	68.32
Zm00001d016440_P001	Maize	cytosol	54.52	67.92
HORVU3Hr1G032480.1	Barley	cytosol, nucleus	67.05	67.21
Zm00001d009556_P001	Maize	cytoskeleton, cytosol, nucleus	52.9	64.96
Zm00001d039000_P001	Maize	mitochondrion	54.52	64.92
GSMUA_Achr11P...	Banana	cytosol	53.36	61.5
Zm00001d010958_P001	Maize	cytosol	43.39	57.36
Zm00001d024527_P001	Maize	cytosol	41.07	50.86
Zm00001d032347_P001	Maize	cytosol	36.43	46.04
Zm00001d053972_P001	Maize	cytosol, golgi, plasma membrane	35.5	36.08
Zm00001d009783_P004	Maize	mitochondrion	26.22	32.29
Zm00001d012242_P001	Maize	cytosol	22.97	31.33
Zm00001d037586_P001	Maize	endoplasmic reticulum	26.22	30.79
Zm00001d034368_P001	Maize	extracellular, plasma membrane	28.77	29.67
Zm00001d013111_P001	Maize	extracellular, plasma membrane	28.54	29.5
Zm00001d033210_P002	Maize	nucleus	28.54	29.36
Zm00001d017476_P001	Maize	plasma membrane	27.61	28.2
Zm00001d013669_P002	Maize	cytosol	28.54	27.39
Zm00001d038250_P001	Maize	cytosol	21.11	27.16
Zm00001d042653_P001	Maize	plastid	23.43	25.25
Zm00001d048538_P001	Maize	nucleus	18.1	24.0
Zm00001d009210_P001	Maize	endoplasmic reticulum	22.27	23.65
Zm00001d026185_P001	Maize	endoplasmic reticulum	25.75	22.07
Zm00001d049583_P003	Maize	cytosol, mitochondrion, nucleus, plastid	25.29	22.02
Zm00001d024635_P001	Maize	mitochondrion	24.83	21.7
Zm00001d023537_P002	Maize	mitochondrion	21.11	21.41
Zm00001d035975_P001	Maize	mitochondrion	20.65	20.75
Zm00001d035974_P001	Maize	mitochondrion	20.65	20.75
Zm00001d006666_P001	Maize	nucleus	13.23	19.45
Zm00001d006563_P001	Maize	mitochondrion	12.06	19.12
Zm00001d031357_P001	Maize	cytosol, nucleus, plastid	8.12	19.02
Zm00001d018413_P003	Maize	mitochondrion	25.06	18.98
Zm00001d006230_P001	Maize	cytosol	12.53	18.62
Zm00001d045645_P001	Maize	cytosol	10.9	17.67
Zm00001d047195_P001	Maize	mitochondrion	12.99	16.97
Zm00001d052001_P002	Maize	plastid	24.13	16.94
Zm00001d004840_P001	Maize	mitochondrion	12.99	16.33
Zm00001d028256_P002	Maize	plastid	19.72	15.8
Zm00001d044878_P002	Maize	mitochondrion	16.47	14.49

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.5.2	Gene3D:2.20.25.170	Gene3D:2.60.260.20	UniProt:A0A1D6MES0	InterPro:DnaJ_C
InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006457
GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:IPR001623	InterPro:IPR036869
InterPro:J_dom_sf	ProteinID:ONM28135.1	PFAM:PF00226	PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636
PFscan:PS50076	PANTHER:PTHR24078	PANTHER:PTHR24078:SF301	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493
UniParc:UPI0008430354	EnsemblPlantsGene:Zm00001d039259	EnsemblPlants:Zm00001d039259_P001	EnsemblPlants:Zm00001d039259_T001	SEG:seg	:

Description

DNAJ heat shock family protein

Coordinates

chr3:-:701136..705353

Molecular Weight (calculated)

47834.1 Da

IEP (calculated)

10.467

GRAVY (calculated)

-0.640

Length

431 amino acids

Sequence
(BLAST)

001: MVDDQLNCYE SWPWRDSSFW NLPFAIRPEF ASGSRRSLSL PRPSHLRKPA TSLRGLTVIS AWHPKAVKIR EAGGTKRRAS DPTSSSARAA RRRREMGADY
101: YKVLGVDRGA SDDDLKKAYR KLAMRWHPDK NSTNKKEAET KFKEISVAYE VLSDPKKRAI YDQLGEEGLK GQPPPGAGGP GTSPFFPGGA HSTAHHFNPR
201: SADDIFKEFF GSPGMGGMRT EPGFQRSMFG NDIFSSRFRA EGSTSMQQPL RKAAAIENPL PVGLADLYKG VTKKMKISRE TIDASGRISN TEDILTIQVK
301: AGWKKGTRIT FPDKGNEAPN MKPADIVFII DEKPHDVFTR EGNDLVVTEK ISLVEALTGY TARVTTLDGR SLSLHINSII HPKYEEVMPG EGMPVPKDPT
401: KKGNLRIKFN IMFPSRLTSD QKAGIKRLLG S

Best Arabidopsis Sequence Match ( AT2G20560.1 )
(BLAST)

001: MGVDYYKVLQ VDRSASDDDL KKAYRKLAMK WHPDKNPNNK KDAEAMFKQI SEAYEVLSDP QKKAVYDQYG EEGLKGNVPP PDAGGATYFS TGDGPTSFRF
101: NPRNADDIFA EFFGFSSPFG GGRGGTRFSS SMFGDNMFAS FGEGGGGGGG SMHHGGARKA APIENKLPCS LEDLYKGTTK KMRISREIAD VSGKTMQVEE
201: ILTIDVKPGW KKGTKITFPE KGNEQPGVIP ADLVFIIDEK PHPVFTREGN DLIVTQKISL VEALTGYTVN LTTLDGRRLT IPVTNVVHPE YEEVVPKEGM
301: PLQKDQTKRG NLRIKFNIKF PTRLTSEQKT GVKKLLG

Arabidopsis Description

At2g20560/T13C7.15 [Source:UniProtKB/TrEMBL;Acc:Q9SIL3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.