Factsheet for Zm00001d053972_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, cytosol

Predictor Summary:

golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, plasma membrane
Any Predictor:	cytosol, secretory
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG29372	Sorghum	cytosol	76.42	95.86
TraesCS6A01G087000.1	Wheat	cytosol	66.98	84.27
TraesCS6B01G115000.1	Wheat	cytosol	66.75	83.98
HORVU6Hr1G016170.1	Barley	cytosol	66.51	83.68
Os02t0128400-01	Rice	cytosol	66.51	83.19
TraesCSU01G019500.1	Wheat	nucleus	66.04	83.09
HORVU6Hr1G016080.3	Barley	cytosol	66.27	82.16
GSMUA_Achr4P12330_001	Banana	nucleus	46.7	60.37
GSMUA_Achr9P23300_001	Banana	cytosol	46.93	57.85
GSMUA_AchrUn_...	Banana	cytosol	43.16	56.66
Bra009848.1-P	Field mustard	cytosol	40.09	53.8
Zm00001d024527_P001	Maize	cytosol	43.87	53.45
CDX80523	Canola	cytosol	40.33	53.27
CDX88188	Canola	cytosol	40.33	53.27
KRH52529	Soybean	cytosol	40.57	52.76
CDY05498	Canola	cytosol	40.8	51.95
CDY54902	Canola	cytosol	40.8	51.95
Bra020505.1-P	Field mustard	cytosol	40.8	51.95
VIT_04s0008g04300.t01	Wine grape	cytosol	41.27	51.62
PGSC0003DMT400083824	Potato	cytosol	39.39	51.54
AT5G25530.1	Thale cress	cytosol	41.51	50.72
KRH61858	Soybean	cytosol	16.98	50.7
KRH61857	Soybean	cytosol, nucleus	13.44	49.14
Zm00001d009556_P001	Maize	cytoskeleton, cytosol, nucleus	38.44	46.44
Zm00001d009027_P001	Maize	cytosol	36.79	46.43
Zm00001d032347_P001	Maize	cytosol	37.03	46.04
Zm00001d016440_P001	Maize	cytosol	37.03	45.38
Zm00001d039000_P001	Maize	mitochondrion	38.44	45.03
Zm00001d010958_P001	Maize	cytosol	33.96	44.17
Zm00001d039259_P001	Maize	nucleus	36.08	35.5
Zm00001d012242_P001	Maize	cytosol	22.41	30.06
Zm00001d038250_P001	Maize	cytosol	22.64	28.66
Zm00001d013111_P001	Maize	extracellular, plasma membrane	27.36	27.82
Zm00001d033210_P002	Maize	nucleus	27.36	27.68
Zm00001d034368_P001	Maize	extracellular, plasma membrane	27.12	27.51
Zm00001d009783_P004	Maize	mitochondrion	22.64	27.43
Zm00001d037586_P001	Maize	endoplasmic reticulum	23.11	26.7
Zm00001d013669_P002	Maize	cytosol	27.12	25.61
Zm00001d017476_P001	Maize	plasma membrane	25.47	25.59
Zm00001d042653_P001	Maize	plastid	23.82	25.25
Zm00001d048538_P001	Maize	nucleus	18.63	24.31
Zm00001d009210_P001	Maize	endoplasmic reticulum	20.52	21.43
Zm00001d026185_P001	Maize	endoplasmic reticulum	25.0	21.07
Zm00001d006230_P001	Maize	cytosol	14.39	21.03
Zm00001d006666_P001	Maize	nucleus	14.15	20.48
Zm00001d031357_P001	Maize	cytosol, nucleus, plastid	8.73	20.11
Zm00001d006563_P001	Maize	mitochondrion	12.5	19.49
Zm00001d045645_P001	Maize	cytosol	12.03	19.17
Zm00001d035975_P001	Maize	mitochondrion	19.1	18.88
Zm00001d035974_P001	Maize	mitochondrion	18.87	18.65
Zm00001d024635_P001	Maize	mitochondrion	21.46	18.46
Zm00001d049583_P003	Maize	cytosol, mitochondrion, nucleus, plastid	21.23	18.18
Zm00001d004840_P001	Maize	mitochondrion	14.39	17.78
Zm00001d023537_P002	Maize	mitochondrion	17.69	17.65
Zm00001d018413_P003	Maize	mitochondrion	21.46	15.99
Zm00001d028256_P002	Maize	plastid	19.58	15.43
Zm00001d052001_P002	Maize	plastid	20.99	14.5
Zm00001d047195_P001	Maize	mitochondrion	9.91	12.73
Zm00001d044878_P002	Maize	mitochondrion	12.97	11.22

Protein Annotations

Gene3D:1.10.287.110	Gene3D:2.60.260.20	MapMan:35.1	UniProt:A0A1D6QTZ2	ProteinID:AQK60886.1	InterPro:DnaJ_C
InterPro:DnaJ_domain	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0006457
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd
InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	PFAM:PF00226	PFAM:PF01556	PRINTS:PR00625
PFscan:PS50076	PANTHER:PTHR24078	PANTHER:PTHR24078:SF363	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493
TMHMM:TMhelix	UniParc:UPI000844BCC4	EnsemblPlantsGene:Zm00001d053972	EnsemblPlants:Zm00001d053972_P001	EnsemblPlants:Zm00001d053972_T001	SEG:seg

Description

DNAJ heat shock family protein

Coordinates

chr4:-:244497283..244500068

Molecular Weight (calculated)

47799.5 Da

IEP (calculated)

9.637

GRAVY (calculated)

-0.441

Length

424 amino acids

Sequence
(BLAST)

001: MDYYNILKVN RNATLEDLKK SYRRLARTWH PDKNLTGGAE AEAKFKQITE AYEASESSRR AFLPVMMYLG IHMITYFWKK RIAMNRLHGL VLIVFILLSV
101: CSAEKSLHTI FQECECKSSV LGAVLIICSL LINSRWLVQV LSDPEKRAIY DQYGEEGLKG MPPPGSQSRS STTAGPSGPS NFHYNPSDPD DFFAEFMASN
201: KTYSFDHDRR RFQPRSHWTS ARNSRSEAPS GSQKENGAST SNIEKPPPVE KTLLCTLEEL YNGTKRKMKI TRNVAKPDGR IEVETEVLAV EVLPGWKKGT
301: KITFPNKGDK LHGQLAQDLT FVLDSKPHDV YNLEGNNLLV KQVIPLVDAL AGAEINLTTL DGRNLPVRVE EVVRPGYEVV LENEGWPIRK EPGKKGKLVI
401: KFDVTFPMRL SPSQRAAIRR IMGS

Best Arabidopsis Sequence Match ( AT2G20560.1 )
(BLAST)

001: MGVDYYKVLQ VDRSASDDDL KKAYRKLAMK WHPDKNPNNK KDAEAMFKQI SEAYEVLSDP QKKAVYDQYG EEGLKGNVPP PDAGGATYFS TGDGPTSFRF
101: NPRNADDIFA EFFGFSSPFG GGRGGTRFSS SMFGDNMFAS FGEGGGGGGG SMHHGGARKA APIENKLPCS LEDLYKGTTK KMRISREIAD VSGKTMQVEE
201: ILTIDVKPGW KKGTKITFPE KGNEQPGVIP ADLVFIIDEK PHPVFTREGN DLIVTQKISL VEALTGYTVN LTTLDGRRLT IPVTNVVHPE YEEVVPKEGM
301: PLQKDQTKRG NLRIKFNIKF PTRLTSEQKT GVKKLLG

Arabidopsis Description

At2g20560/T13C7.15 [Source:UniProtKB/TrEMBL;Acc:Q9SIL3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.