Factsheet for Zm00001d024635_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G115000.1	Wheat	plastid	77.48	92.05
Os05t0333500-01	Rice	mitochondrion, plastid	82.15	90.6
Os05t0334000-01	Rice	mitochondrion, plastid	82.15	90.6
Os05t0334400-01	Rice	mitochondrion, plastid	82.15	90.6
Zm00001d049583_P003	Maize	cytosol, mitochondrion, nucleus, plastid	88.84	88.48
Solyc01g105340.2.1	Tomato	plastid	57.61	80.45
TraesCS5B01G115900.1	Wheat	plastid	77.48	79.09
Zm00001d047195_P001	Maize	mitochondrion	52.13	77.88
GSMUA_Achr1P15780_001	Banana	plastid	68.76	76.18
GSMUA_Achr3P00920_001	Banana	mitochondrion	69.17	75.44
KRH59311	Soybean	plastid	62.88	71.59
PGSC0003DMT400032760	Potato	plastid	64.3	71.24
TraesCS5D01G125500.1	Wheat	nucleus	77.69	71.19
KRH43163	Soybean	plastid	63.08	71.17
KRH31310	Soybean	nucleus, plastid	61.66	69.09
KRG97564	Soybean	plastid	61.26	68.64
AT4G39960.1	Thale cress	mitochondrion, plastid	62.07	68.46
CDX89453	Canola	plastid	62.27	67.92
Bra030245.1-P	Field mustard	plastid	62.27	67.92
AT2G22360.1	Thale cress	plastid	60.85	67.87
CDY25588	Canola	plastid	62.27	67.62
VIT_00s0324g00040.t01	Wine grape	plastid	65.52	67.15
HORVU5Hr1G037600.2	Barley	cytosol, nucleus	78.5	66.38
GSMUA_Achr4P20410_001	Banana	cytosol	68.76	64.57
CDY63891	Canola	cytosol	61.26	62.14
CDX69371	Canola	mitochondrion	61.26	60.28
Bra011820.1-P	Field mustard	cytosol	61.26	57.09
Zm00001d018413_P003	Maize	mitochondrion	41.99	36.38
Zm00001d035974_P001	Maize	mitochondrion	29.82	34.27
Zm00001d052001_P002	Maize	plastid	42.6	34.2
Zm00001d035975_P001	Maize	mitochondrion	29.61	34.03
Zm00001d028256_P002	Maize	plastid	34.69	31.78
Zm00001d023537_P002	Maize	mitochondrion	27.38	31.76
Zm00001d009556_P001	Maize	cytoskeleton, cytosol, nucleus	22.31	31.34
Zm00001d024527_P001	Maize	cytosol	22.11	31.32
Zm00001d039000_P001	Maize	mitochondrion	22.31	30.39
Zm00001d016440_P001	Maize	cytosol	21.3	30.35
Zm00001d009027_P001	Maize	cytosol	20.49	30.06
Zm00001d010958_P001	Maize	cytosol	19.47	29.45
Zm00001d034368_P001	Maize	extracellular, plasma membrane	23.53	27.75
Zm00001d009783_P004	Maize	mitochondrion	19.47	27.43
Zm00001d013111_P001	Maize	extracellular, plasma membrane	23.12	27.34
Zm00001d032347_P001	Maize	cytosol	18.26	26.39
Zm00001d017476_P001	Maize	plasma membrane	22.52	26.3
Zm00001d033210_P002	Maize	nucleus	22.31	26.25
Zm00001d037586_P001	Maize	endoplasmic reticulum	19.27	25.89
Zm00001d039259_P001	Maize	nucleus	21.7	24.83
Zm00001d013669_P002	Maize	cytosol	22.52	24.72
Zm00001d048538_P001	Maize	nucleus	15.21	23.08
Zm00001d031357_P001	Maize	cytosol, nucleus, plastid	8.32	22.28
Zm00001d026185_P001	Maize	endoplasmic reticulum	22.31	21.87
Zm00001d006666_P001	Maize	nucleus	12.98	21.84
Zm00001d053972_P001	Maize	cytosol, golgi, plasma membrane	18.46	21.46
Zm00001d009210_P001	Maize	endoplasmic reticulum	17.44	21.18
Zm00001d006563_P001	Maize	mitochondrion	11.36	20.59
Zm00001d044878_P002	Maize	mitochondrion	19.88	20.0
Zm00001d012242_P001	Maize	cytosol	12.37	19.3
Zm00001d006230_P001	Maize	cytosol	10.95	18.62
Zm00001d038250_P001	Maize	cytosol	12.37	18.21
Zm00001d004840_P001	Maize	mitochondrion	12.37	17.78
Zm00001d045645_P001	Maize	cytosol	9.53	17.67
Zm00001d042653_P001	Maize	plastid	12.98	16.0

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.4.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	UniProt:A0A1D6J0S9	ProteinID:AQK41670.1
InterPro:DnaJ	InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150
GO:GO:0009408	GO:GO:0009628	GO:GO:0009987	GO:GO:0031072	GO:GO:0046872	GO:GO:0051082
InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305	InterPro:IPR001623	InterPro:IPR036869
InterPro:J_dom_sf	HAMAP:MF_01152	PFAM:PF00226	PFAM:PF00684	PFAM:PF01556	PRINTS:PR00625
ScanProsite:PS00636	PFscan:PS50076	PFscan:PS51188	PANTHER:PTHR43096	SMART:SM00271	SUPFAM:SSF46565
SUPFAM:SSF49493	SUPFAM:SSF57938	TIGRFAMs:TIGR02349	UniParc:UPI000843FEB7	EnsemblPlantsGene:Zm00001d024635	EnsemblPlants:Zm00001d024635_P001
EnsemblPlants:Zm00001d024635_T001	SEG:seg	:	:	:	:

Description

Chaperone protein dnaJ A6 chloroplastic

Coordinates

chr10:-:81355519..81359449

Molecular Weight (calculated)

53558.0 Da

IEP (calculated)

9.852

GRAVY (calculated)

-0.368

Length

493 amino acids

Sequence
(BLAST)

001: MLISVLFLGF RRLHASNKHY MALVQFNGAL VPQLGEKPRL LSLSAAIAKA AYSDARFLTP KTGYVCAQFR YCLVVDCNLW AISRGRGKHL LSPSYSLHSQ
101: TSSEQLNHVP SSRFRQKRGS RFIVRAEADF YSVLGVSRNA SKSEIKSGWY LLFAYRKLAR SYHPDVNKDP GAEQKFKDIS NAYEVLSDDE KRSIYDKYGE
201: AGLKGAGMGT GDYSNPFDLF ESLFEGFGGM GGMGGGRAAR NRPMQGDDES YNLVLNFKEA VFGVEKEIEI TRLEGCNTCD GSGAKPGTKA TTCKTCGGQG
301: QVVSSTRTPL GIFQQVSTCN TCGGTGEFST PCNTCGGDGR VRRTKRISLK VPAGVDSGSR LRVRSEGNAG RRGGPPGDLY VFIDVLSDPV LKRDGTNILY
401: TCKVSYIDAI LGTTVKVPTV DGTVDLKIPS GTQPGTTLVM SKKGVPLLGK SNARGDQLVR VQVEIPKRLS SDEKKLIEEL ANLNKAQTAN SRR

Best Arabidopsis Sequence Match ( AT1G80030.1 )
(BLAST)

001: MAALASPSLI PSSLCFAAAA DGPRSLSSNF SAFSDGGSNF RYHKSFLSLS SSSSSSTPYR NRRGRSLVVF ATSGDYYATL GVSKSANNKE IKAAYRRLAR
101: QYHPDVNKEP GATEKFKEIS AAYEVLSDEQ KRALYDQYGE AGVKSTVGGA SGPYTSNPFD LFETFFGASM GGFPGMDQAD FGRTRRSRVT KGEDLRYDIT
201: LELSEAIFGS EKEFDLTHLE TCEACAGTGA KAGSKMRICS TCGGRGQVMR TEQTPFGMFS QVSICPNCGG DGEVISENCR KCSGEGRVRI KKSIKVKIPP
301: GVSAGSILRV AGEGDSGPRG GPPGDLYVYL DVEDVRGIER DGINLLSTLS ISYLDAILGA VVKVKTVEGD TELQIPPGTQ PGDVLVLAKK GVPKLNRPSI
401: RGDHLFTVKV SVPNQISAGE RELLEELASL KDTSSNRSRT RAKPQQPSTL STAPSGSENK KDEVKEENEE PEQENYLWNN IKEFAGSVAN GALKWLRDNL

Arabidopsis Description

Molecular chaperone Hsp40/DnaJ family protein [Source:UniProtKB/TrEMBL;Acc:Q0WN54]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.