Factsheet for TraesCS5A01G115000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0334400-01	Rice	mitochondrion, plastid	92.05	85.46
Os05t0334000-01	Rice	mitochondrion, plastid	92.05	85.46
Os05t0333500-01	Rice	mitochondrion, plastid	92.05	85.46
EES13204	Sorghum	plastid	92.05	85.27
TraesCS5B01G115900.1	Wheat	plastid	96.14	82.61
Solyc01g105340.2.1	Tomato	plastid	68.92	81.02
Zm00001d024635_P001	Maize	mitochondrion	92.05	77.48
Zm00001d047195_P001	Maize	mitochondrion	59.76	75.15
Zm00001d049583_P003	Maize	cytosol, mitochondrion, nucleus, plastid	89.16	74.75
TraesCS5D01G125500.1	Wheat	nucleus	96.14	74.16
GSMUA_Achr1P15780_001	Banana	plastid	79.28	73.93
GSMUA_Achr3P00920_001	Banana	mitochondrion	80.24	73.67
PGSC0003DMT400032760	Potato	plastid	75.42	70.34
KRH59311	Soybean	plastid	71.81	68.82
HORVU5Hr1G037600.2	Barley	cytosol, nucleus	96.63	68.78
KRH43163	Soybean	plastid	72.29	68.65
KRH31310	Soybean	nucleus, plastid	71.81	67.73
KRG97564	Soybean	plastid	71.33	67.27
CDX89453	Canola	plastid	71.81	65.93
Bra030245.1-P	Field mustard	plastid	71.57	65.71
CDY25588	Canola	plastid	71.57	65.42
VIT_00s0324g00040.t01	Wine grape	plastid	75.66	65.28
AT4G39960.1	Thale cress	mitochondrion, plastid	70.12	65.1
AT2G22360.1	Thale cress	plastid	69.16	64.93
GSMUA_Achr4P20410_001	Banana	cytosol	79.28	62.67
CDY63891	Canola	cytosol	68.92	58.85
CDX69371	Canola	mitochondrion	68.67	56.89
Bra011820.1-P	Field mustard	cytosol	68.67	53.88
TraesCS6A01G372700.1	Wheat	plastid	49.88	42.42
TraesCS7A01G051000.1	Wheat	mitochondrion	34.94	33.03
TraesCS5A01G117600.1	Wheat	plastid	33.01	32.54
TraesCS7A01G298000.1	Wheat	cytosol	25.06	30.06
TraesCS4A01G064300.2	Wheat	plastid	38.8	29.81
TraesCS3A01G520100.1	Wheat	cytosol	18.8	29.21
TraesCS3A01G161200.1	Wheat	nucleus	23.86	28.7
TraesCS1A01G395300.1	Wheat	cytosol	25.54	28.49
TraesCS6A01G087000.1	Wheat	cytosol	22.65	27.89
TraesCS1A01G099300.1	Wheat	nucleus	23.37	27.71
TraesCS1A01G070300.1	Wheat	cytosol	22.41	27.43
TraesCS7A01G176600.1	Wheat	mitochondrion	31.08	27.1
TraesCS5A01G426100.1	Wheat	nucleus	27.23	26.84
TraesCS5A01G372900.1	Wheat	nucleus	27.23	26.84
TraesCS6A01G250800.1	Wheat	nucleus	25.54	24.94
TraesCS1A01G267600.1	Wheat	cytosol	16.39	20.8
TraesCS3A01G386400.1	Wheat	cytosol	14.7	19.06
TraesCS6A01G421300.1	Wheat	cytosol	8.43	16.59

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.4.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	InterPro:DnaJ	InterPro:DnaJ_C
InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009408	GO:GO:0009628
GO:GO:0009987	GO:GO:0031072	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf
InterPro:IPR001305	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	HAMAP:MF_01152	PFAM:PF00226
PFAM:PF00684	PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PFscan:PS51188
PANTHER:PTHR43096	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	SUPFAM:SSF57938	TIGRFAMs:TIGR02349
EnsemblPlantsGene:TraesCS5A01G115000	EnsemblPlants:TraesCS5A01G115000.1	TIGR:cd06257	TIGR:cd10719	TIGR:cd10747	SEG:seg

Description

No Description!

Coordinates

chr5A:+:230067733..230072663

Molecular Weight (calculated)

44765.3 Da

IEP (calculated)

10.015

GRAVY (calculated)

-0.536

Length

415 amino acids

Sequence
(BLAST)

001: MGVGVPWPSI RDSWHRKIGT RGRGKHLASP SASLNHAPSP RFRHRRGSRF IVRAESDFYS VLGVSRNASK SEIKSAYRKL ARSYHPDVNK EPGAEQKFKD
101: ISNAYEVLSD DEKRAIYDKY GEAGLKGSGM GTGDYSNPFD LFESLFEGFG GMGGMGGGRA ARNRPMQGDD ESYNLVLNFK EAVFGVEKEI EITRLEGCNT
201: CDGSGAKPGT KPTTCKTCGG QGQVVSSTRT PLGIFQQVST CNTCGGTGEF STPCKTCGGD GRVRKTKRIS LKVPAGVDSG SRLRVRSEGN AGRRGGPPGD
301: LYVFIDVLSD SVLKRDGTNI LYTCKVSYID AILGTTVKVP TVDGVVDLKI PSGTQPGTTL VMSKKGVPLL GKSNARGDQL VRVQVEIPKR LSSDERKLIE
401: ELANLNKAEL ANSRR

Best Arabidopsis Sequence Match ( AT2G22360.1 )
(BLAST)

001: MAIIQLGSTC VAQWSIRPQF AVRAYYPSRI ESTRHQNSSS QVNCLGASKS SMFSHGSLPF LSMTGMSRNM HPPRRGSRFT VRADADYYSV LGVSKNATKA
101: EIKSAYRKLA RNYHPDVNKD PGAEEKFKEI SNAYEVLSDD EKKSLYDRYG EAGLKGAAGF GNGDFSNPFD LFDSLFEGFG GGMGRGSRSR AVDGQDEYYT
201: LILNFKEAVF GMEKEIEISR LESCGTCEGS GAKPGTKPTK CTTCGGQGQV VSAARTPLGV FQQVMTCSSC NGTGEISTPC GTCSGDGRVR KTKRISLKVP
301: AGVDSGSRLR VRGEGNAGKR GGSPGDLFVV IEVIPDPILK RDDTNILYTC KISYIDAILG TTLKVPTVDG TVDLKVPAGT QPSTTLVMAK KGVPVLNKSN
401: MRGDQLVRVQ VEIPKRLSKE EKKLIEELAD MSKNKTANST SR

Arabidopsis Description

DJA6Chaperone protein dnaJ A6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SJZ7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.