Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G418500.1 | Wheat | cytosol | 98.75 | 97.23 |
| TraesCS3D01G379400.1 | Wheat | cytosol | 98.12 | 96.62 |
| HORVU3Hr1G081940.1 | Barley | cytosol | 95.31 | 94.14 |
| TraesCS6A01G421300.1 | Wheat | cytosol | 55.31 | 83.89 |
| EES01846 | Sorghum | cytosol | 81.88 | 79.64 |
| Os01t0875700-01 | Rice | cytosol | 80.62 | 78.9 |
| Zm00001d012242_P001 | Maize | cytosol | 74.38 | 75.32 |
| HORVU7Hr1G073040.2 | Barley | cytosol | 50.94 | 70.26 |
| TraesCS1A01G267600.1 | Wheat | cytosol | 67.19 | 65.75 |
| Zm00001d042653_P001 | Maize | plastid | 76.56 | 61.25 |
| GSMUA_Achr7P03030_001 | Banana | cytosol | 57.5 | 57.86 |
| GSMUA_Achr8P32540_001 | Banana | mitochondrion | 33.44 | 38.49 |
| Solyc11g044450.1.1 | Tomato | nucleus | 39.38 | 36.63 |
| PGSC0003DMT400062759 | Potato | cytosol | 39.38 | 36.31 |
| KRH10414 | Soybean | cytosol | 39.38 | 33.07 |
| KRH44054 | Soybean | cytosol | 39.38 | 32.81 |
| TraesCS3A01G161200.1 | Wheat | nucleus | 35.31 | 32.75 |
| TraesCS6A01G087000.1 | Wheat | cytosol | 33.44 | 31.75 |
| TraesCS3A01G520100.1 | Wheat | cytosol | 26.25 | 31.46 |
| TraesCS7A01G298000.1 | Wheat | cytosol | 33.75 | 31.21 |
| VIT_12s0034g02190.t01 | Wine grape | nucleus | 33.44 | 31.2 |
| CDY66166 | Canola | plastid | 33.75 | 31.03 |
| TraesCS1A01G395300.1 | Wheat | cytosol | 35.94 | 30.91 |
| KRH64663 | Soybean | plastid | 34.06 | 30.79 |
| CDY14974 | Canola | nucleus | 33.12 | 30.64 |
| AT1G44160.1 | Thale cress | mitochondrion | 34.06 | 30.53 |
| TraesCS1A01G070300.1 | Wheat | cytosol | 32.19 | 30.38 |
| Bra036942.1-P | Field mustard | nucleus | 33.12 | 30.37 |
| Bra032204.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 33.75 | 29.83 |
| CDY20977 | Canola | nucleus | 35.94 | 28.54 |
| CDY20589 | Canola | nucleus | 34.69 | 28.24 |
| Bra018413.1-P | Field mustard | nucleus | 35.31 | 28.11 |
| Solyc06g060240.1.1 | Tomato | cytosol | 33.44 | 27.86 |
| PGSC0003DMT400045241 | Potato | extracellular, mitochondrion | 33.12 | 27.53 |
| CDX97927 | Canola | nucleus | 35.94 | 26.56 |
| CDY67277 | Canola | cytosol, nucleus, plastid | 35.94 | 26.44 |
| Bra019886.1-P | Field mustard | nucleus | 35.62 | 26.33 |
| KRG90292 | Soybean | cytosol, nucleus, plastid | 23.12 | 25.87 |
| AT1G11040.1 | Thale cress | cytosol, nucleus, plastid | 35.0 | 25.57 |
| TraesCS1A01G099300.1 | Wheat | nucleus | 22.5 | 20.57 |
| TraesCS5A01G426100.1 | Wheat | nucleus | 25.31 | 19.24 |
| TraesCS6A01G250800.1 | Wheat | nucleus | 24.69 | 18.59 |
| TraesCS5A01G372900.1 | Wheat | nucleus | 23.75 | 18.05 |
| TraesCS5A01G115000.1 | Wheat | plastid | 19.06 | 14.7 |
| TraesCS5A01G117600.1 | Wheat | plastid | 19.06 | 14.49 |
| TraesCS7A01G051000.1 | Wheat | mitochondrion | 19.69 | 14.35 |
| TraesCS6A01G372700.1 | Wheat | plastid | 20.0 | 13.11 |
| TraesCS7A01G176600.1 | Wheat | mitochondrion | 19.06 | 12.82 |
| TraesCS4A01G064300.2 | Wheat | plastid | 19.69 | 11.67 |
Protein Annotations
| Gene3D:1.10.287.110 | Gene3D:2.60.260.20 | MapMan:35.1 | InterPro:DnaJ_C | InterPro:DnaJ_domain | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006457 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0051082 |
| InterPro:HSP40/DnaJ_pept-bd | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | PFAM:PF00226 | PFAM:PF01556 |
| PRINTS:PR00625 | PFscan:PS50076 | PANTHER:PTHR24078 | PANTHER:PTHR24078:SF517 | SMART:SM00271 | SUPFAM:SSF46565 |
| SUPFAM:SSF49493 | EnsemblPlantsGene:TraesCS3A01G386400 | EnsemblPlants:TraesCS3A01G386400.1 | TIGR:cd06257 | TIGR:cd10747 | : |
Description
No Description!
Coordinates
chr3A:+:635727259..635729347
Molecular Weight (calculated)
35316.5 Da
IEP (calculated)
9.589
GRAVY (calculated)
-0.443
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MVNPPELYHR ILDVPRGTSS QGLRAAYKGL ARKWHPDKHP PASKPEAEAR FKAITEAYEA LLDQQENRAV FGACNDDRAA EMFGTFGAGA RMARSRSDDF
101: CMRSAPATPA REFTKVYSSG NTGGRRAFAE FSSSIMRKAP PLERALECTL EELCRGCKKQ VKFTRDVVTK NGSIVKKEVT QAIMVKPGWR KGHKVTLDGM
201: GDERPGCLPA DAVFTVAEKK HSTFKRVGDD LVLKAKVPLV SALTGWSFSF RLLSGKKVSC SFDDEVICPG YEKVIKGEGM PIAEQRGARG DLRVKLEIVF
301: PEQLTDEQRA GLAQILKDCT
101: CMRSAPATPA REFTKVYSSG NTGGRRAFAE FSSSIMRKAP PLERALECTL EELCRGCKKQ VKFTRDVVTK NGSIVKKEVT QAIMVKPGWR KGHKVTLDGM
201: GDERPGCLPA DAVFTVAEKK HSTFKRVGDD LVLKAKVPLV SALTGWSFSF RLLSGKKVSC SFDDEVICPG YEKVIKGEGM PIAEQRGARG DLRVKLEIVF
301: PEQLTDEQRA GLAQILKDCT
001: MGVDYYKVLQ VDRSASDDDL KKAYRKLAMK WHPDKNPNNK KDAEAMFKQI SEAYEVLSDP QKKAVYDQYG EEGLKGNVPP PDAGGATYFS TGDGPTSFRF
101: NPRNADDIFA EFFGFSSPFG GGRGGTRFSS SMFGDNMFAS FGEGGGGGGG SMHHGGARKA APIENKLPCS LEDLYKGTTK KMRISREIAD VSGKTMQVEE
201: ILTIDVKPGW KKGTKITFPE KGNEQPGVIP ADLVFIIDEK PHPVFTREGN DLIVTQKISL VEALTGYTVN LTTLDGRRLT IPVTNVVHPE YEEVVPKEGM
301: PLQKDQTKRG NLRIKFNIKF PTRLTSEQKT GVKKLLG
101: NPRNADDIFA EFFGFSSPFG GGRGGTRFSS SMFGDNMFAS FGEGGGGGGG SMHHGGARKA APIENKLPCS LEDLYKGTTK KMRISREIAD VSGKTMQVEE
201: ILTIDVKPGW KKGTKITFPE KGNEQPGVIP ADLVFIIDEK PHPVFTREGN DLIVTQKISL VEALTGYTVN LTTLDGRRLT IPVTNVVHPE YEEVVPKEGM
301: PLQKDQTKRG NLRIKFNIKF PTRLTSEQKT GVKKLLG
Arabidopsis Description
At2g20560/T13C7.15 [Source:UniProtKB/TrEMBL;Acc:Q9SIL3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.