Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY20977 | Canola | nucleus | 94.66 | 92.31 |
| CDX97927 | Canola | nucleus | 83.46 | 75.75 |
| AT1G11040.1 | Thale cress | cytosol, nucleus, plastid | 84.22 | 75.57 |
| CDY67277 | Canola | cytosol, nucleus, plastid | 83.46 | 75.4 |
| Os05t0427900-01 | Rice | cytosol | 17.56 | 43.67 |
| GSMUA_Achr7P03030_001 | Banana | cytosol | 31.04 | 38.36 |
| KRH64663 | Soybean | plastid | 33.84 | 37.57 |
| Solyc06g060240.1.1 | Tomato | cytosol | 34.86 | 35.68 |
| GSMUA_Achr8P32540_001 | Banana | mitochondrion | 25.19 | 35.61 |
| PGSC0003DMT400045241 | Potato | extracellular, mitochondrion | 34.35 | 35.06 |
| HORVU3Hr1G081940.1 | Barley | cytosol | 28.75 | 34.88 |
| Os01t0875700-01 | Rice | cytosol | 29.01 | 34.86 |
| TraesCS3A01G386400.1 | Wheat | cytosol | 28.24 | 34.69 |
| TraesCS1B01G278300.1 | Wheat | cytosol | 28.75 | 34.56 |
| Zm00001d012242_P001 | Maize | cytosol | 27.74 | 34.49 |
| TraesCS1D01G267500.1 | Wheat | cytosol | 29.01 | 34.44 |
| EES01846 | Sorghum | cytosol | 28.75 | 34.35 |
| TraesCS3B01G418500.1 | Wheat | cytosol | 28.24 | 34.15 |
| TraesCS3D01G379400.1 | Wheat | cytosol | 27.99 | 33.85 |
| TraesCS1A01G267600.1 | Wheat | cytosol | 27.74 | 33.33 |
| Zm00001d038250_P001 | Maize | cytosol | 26.72 | 31.34 |
| CDY66166 | Canola | plastid | 27.48 | 31.03 |
| CDY14974 | Canola | nucleus | 27.23 | 30.92 |
| CDY64940 | Canola | nucleus | 25.7 | 30.79 |
| CDY36915 | Canola | cytosol | 25.95 | 30.54 |
| CDY58657 | Canola | cytosol | 25.19 | 30.37 |
| CDY20944 | Canola | cytosol | 23.41 | 30.16 |
| CDY27963 | Canola | cytosol | 25.19 | 30.09 |
| CDY07893 | Canola | cytosol | 24.68 | 30.03 |
| EES19566 | Sorghum | cytosol | 25.95 | 30.0 |
| CDY20637 | Canola | cytosol | 24.43 | 30.0 |
| CDY68815 | Canola | cytoskeleton, cytosol, nucleus | 25.45 | 29.94 |
| CDY45143 | Canola | cytoskeleton, cytosol, nucleus | 25.19 | 29.91 |
| CDX80523 | Canola | cytosol | 24.43 | 29.91 |
| CDX88188 | Canola | cytosol | 24.43 | 29.91 |
| CDY22173 | Canola | cytosol | 25.45 | 29.76 |
| CDY30900 | Canola | cytoskeleton, cytosol, nucleus | 25.45 | 29.67 |
| CDY21803 | Canola | nucleus | 25.19 | 29.29 |
| CDY29908 | Canola | cytoskeleton, cytosol, nucleus | 23.92 | 29.28 |
| CDX92876 | Canola | cytoskeleton, cytosol, nucleus | 23.66 | 29.25 |
| CDX68447 | Canola | cytosol | 25.45 | 29.15 |
| CDY05498 | Canola | cytosol | 24.68 | 29.13 |
| CDY54902 | Canola | cytosol | 24.68 | 29.13 |
| CDX83026 | Canola | cytosol | 24.17 | 28.96 |
| CDX97443 | Canola | cytosol | 21.88 | 28.57 |
| CDY35188 | Canola | cytosol | 23.41 | 28.4 |
| CDY65077 | Canola | cytosol | 24.17 | 28.27 |
| CDY37986 | Canola | cytosol | 16.79 | 27.97 |
| CDY24146 | Canola | cytosol | 26.46 | 27.59 |
| CDY13869 | Canola | cytosol | 23.66 | 27.51 |
| Zm00001d042653_P001 | Maize | plastid | 27.99 | 27.5 |
| CDY38388 | Canola | cytosol | 23.41 | 26.9 |
| HORVU0Hr1G000620.4 | Barley | plastid | 23.92 | 23.8 |
| TraesCS6A01G421300.1 | Wheat | cytosol | 10.94 | 20.38 |
| CDY16617 | Canola | nucleus | 10.69 | 20.19 |
| CDX76646 | Canola | golgi | 17.05 | 19.36 |
| CDY11430 | Canola | golgi | 17.05 | 19.36 |
| CDY59898 | Canola | endoplasmic reticulum, golgi | 17.05 | 19.31 |
| CDY63310 | Canola | endoplasmic reticulum | 16.54 | 18.73 |
| CDX89142 | Canola | endoplasmic reticulum | 16.54 | 18.73 |
| CDX67894 | Canola | endoplasmic reticulum, golgi | 15.52 | 18.65 |
| HORVU7Hr1G073040.2 | Barley | cytosol | 10.18 | 17.24 |
| CDY09117 | Canola | nucleus | 17.56 | 16.31 |
| CDY65546 | Canola | nucleus | 17.3 | 16.15 |
| CDX92385 | Canola | nucleus | 17.3 | 16.11 |
| CDX92386 | Canola | nucleus | 17.3 | 16.11 |
| CDX88812 | Canola | nucleus | 16.29 | 15.69 |
| CDX70980 | Canola | nucleus | 16.03 | 15.48 |
| CDX90134 | Canola | mitochondrion | 13.99 | 12.79 |
| CDX89453 | Canola | plastid | 14.5 | 12.61 |
| CDY25588 | Canola | plastid | 14.5 | 12.56 |
| CDY58774 | Canola | plastid | 14.25 | 11.2 |
| CDY35761 | Canola | mitochondrion | 12.72 | 11.19 |
| CDY45921 | Canola | mitochondrion | 12.72 | 11.19 |
| CDX95817 | Canola | plastid | 14.25 | 11.13 |
| CDX92166 | Canola | plastid | 14.25 | 11.09 |
| CDX86330 | Canola | mitochondrion | 12.72 | 10.96 |
| CDY35719 | Canola | mitochondrion | 13.74 | 10.87 |
| CDY54516 | Canola | mitochondrion | 12.47 | 10.82 |
| CDX87288 | Canola | plastid | 13.74 | 10.78 |
| CDY63891 | Canola | cytosol | 12.98 | 10.49 |
| CDX69371 | Canola | mitochondrion | 12.98 | 10.18 |
Protein Annotations
| EnsemblPlants:CDY20589 | EnsemblPlantsGene:GSBRNA2T00012756001 | Gene3D:2.60.260.20 | GO:A0A078G5H5 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0006457 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0051082 | InterPro:DnaJ_C |
| InterPro:HSP40/DnaJ_pept-bd | PANTHER:PTHR24078 | PANTHER:PTHR24078:SF522 | PFAM:PF01556 | ProteinID:CDY20589 | ProteinID:CDY20589.1 |
| SEG:seg | SUPFAM:SSF49493 | UniParc:UPI0004EECE88 | UniProt:A0A078G5H5 | MapMan:35.2 | : |
Description
BnaC08g14690DBnaC08g14690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G5H5]
Coordinates
chrLK032110:+:33713..35549
Molecular Weight (calculated)
43014.0 Da
IEP (calculated)
9.894
GRAVY (calculated)
-0.598
Length
393 amino acids
Sequence
(BLAST)
(BLAST)
001: MATPRSPATA CKAYKSLVTK LHPLSSHLES DSNADSAIHL EEKFAEDDDL TAARKGLRLQ SMDDSSVFKR RSSSLRSNSS SRRSHTPQAR PTYLSSSSSS
101: SSNRRSFFSR STSRGHKSRP VSNNASPMTS SPSPTGKDQT LADLFGDVEG LTSPPPRMIT KSRSKRDKEN SGSSATSVAF RKSKSTRDTV GSMGRSSTPI
201: VFSQSTPPKK PPAVEKMLEC TLEELCHGGV KNIKITRDII TDEGLIMKQE ETLRVNIKPG WKKGTKITFE GVGNEKPGYL PEDITFVVEE KRHSLFKSRG
301: DDLEIAVEIP LLKALTGCNL SVPLLSGESM SISVGEVIFH GFEKAIKGQG LPNGKEDGKR GDLIITFLVS FPKELSEEHR SMAYEVLKDC SWV
101: SSNRRSFFSR STSRGHKSRP VSNNASPMTS SPSPTGKDQT LADLFGDVEG LTSPPPRMIT KSRSKRDKEN SGSSATSVAF RKSKSTRDTV GSMGRSSTPI
201: VFSQSTPPKK PPAVEKMLEC TLEELCHGGV KNIKITRDII TDEGLIMKQE ETLRVNIKPG WKKGTKITFE GVGNEKPGYL PEDITFVVEE KRHSLFKSRG
301: DDLEIAVEIP LLKALTGCNL SVPLLSGESM SISVGEVIFH GFEKAIKGQG LPNGKEDGKR GDLIITFLVS FPKELSEEHR SMAYEVLKDC SWV
001: MGTPRSPATD FFGISKTACK AYKSLVTKLH PLSSHRKSES HSDADSAIHR RYLEEKFAEE DDLIAARRGL RLQSMDDSSV FKRRSSLLSN SSSRRSHTPQ
101: ARPTYLSSSA SSNRRSAFSR STSRRDEGSS HSGVRSHGLK SRPISNNTSP MTSPFTSPRG KDQTLGDLFG SVKKLSSPTS NSPINGVKQS SPSSISKSAS
201: KRDKDERGST SSATSTSLPY SKSKSTRDTA GSIAKSISRR STTPIVFSQS TPPKKPPAVE KKLECTLEEL CHGGVKNIKI KRDIITDEGL IMQQEEMLRV
301: NIQPGWKKGT KITFEGVGNE KPGYLPEDIT FVVEEKRHPL FKRRGDDLEI AVEIPLLKAL TGCKLSVPLL SGESMSITVG DVIFHGFEKA IKGQGMPNAK
401: EEGKRGDLRI TFLVNFPEKL SEEQRSMAYE VLKDCSWA
101: ARPTYLSSSA SSNRRSAFSR STSRRDEGSS HSGVRSHGLK SRPISNNTSP MTSPFTSPRG KDQTLGDLFG SVKKLSSPTS NSPINGVKQS SPSSISKSAS
201: KRDKDERGST SSATSTSLPY SKSKSTRDTA GSIAKSISRR STTPIVFSQS TPPKKPPAVE KKLECTLEEL CHGGVKNIKI KRDIITDEGL IMQQEEMLRV
301: NIQPGWKKGT KITFEGVGNE KPGYLPEDIT FVVEEKRHPL FKRRGDDLEI AVEIPLLKAL TGCKLSVPLL SGESMSITVG DVIFHGFEKA IKGQGMPNAK
401: EEGKRGDLRI TFLVNFPEKL SEEQRSMAYE VLKDCSWA
Arabidopsis Description
DNAJ chaperone C-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:O04087]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.