CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20637	Canola	cytosol	94.75	90.31
Bra018443.1-P	Field mustard	nucleus	99.02	86.53
AT1G10350.1	Thale cress	cytosol	87.21	76.22
CDY37986	Canola	cytosol	58.69	75.85
CDY45143	Canola	cytoskeleton, cytosol, nucleus	77.7	71.6
CDY30900	Canola	cytoskeleton, cytosol, nucleus	78.69	71.22
PGSC0003DMT400007444	Potato	cytosol	62.62	61.61
KRH69388	Soybean	cytosol	55.74	61.59
KRH74747	Soybean	cytosol	55.08	60.65
Solyc05g006820.2.1	Tomato	plastid	61.64	60.45
PGSC0003DMT400045398	Potato	mitochondrion	61.31	60.13
Solyc04g005820.2.1	Tomato	cytosol, nucleus	62.62	59.69
VIT_01s0026g01450.t01	Wine grape	cytosol	52.79	58.97
KRH45833	Soybean	cytosol	54.75	57.79
CDY29908	Canola	cytoskeleton, cytosol, nucleus	60.66	57.63
CDX83026	Canola	cytosol	61.31	57.01
CDY35188	Canola	cytosol	60.33	56.79
CDX92876	Canola	cytoskeleton, cytosol, nucleus	59.02	56.6
CDX97443	Canola	cytosol	55.74	56.48
KRG99186	Soybean	cytosol	53.44	56.4
CDY65077	Canola	cytosol	61.97	56.25
CDY13869	Canola	cytosol	61.97	55.92
CDY36915	Canola	cytosol	60.98	55.69
CDY64940	Canola	nucleus	59.67	55.49
CDX80523	Canola	cytosol	58.03	55.14
CDX88188	Canola	cytosol	58.03	55.14
CDY58657	Canola	cytosol	58.69	54.91
CDY07893	Canola	cytosol	58.03	54.8
CDY27963	Canola	cytosol	59.02	54.71
CDX68447	Canola	cytosol	61.31	54.52
CDY38388	Canola	cytosol	60.33	53.8
CDY68815	Canola	cytoskeleton, cytosol, nucleus	58.36	53.29
CDY22173	Canola	cytosol	58.36	52.98
CDY54902	Canola	cytosol	56.39	51.65
CDY05498	Canola	cytosol	56.39	51.65
CDY21803	Canola	nucleus	57.05	51.48
CDY24146	Canola	cytosol	61.31	49.6
KRH60063	Soybean	endoplasmic reticulum, golgi	30.82	47.47
CDY59898	Canola	endoplasmic reticulum, golgi	36.39	31.99
CDX67894	Canola	endoplasmic reticulum, golgi	34.1	31.8
CDX89142	Canola	endoplasmic reticulum	36.07	31.7
CDY63310	Canola	endoplasmic reticulum	36.07	31.7
CDX76646	Canola	golgi	35.74	31.5
CDY11430	Canola	golgi	35.74	31.5
CDY66166	Canola	plastid	30.16	26.44
CDX70980	Canola	nucleus	35.08	26.29
CDX88812	Canola	nucleus	35.08	26.23
CDY14974	Canola	nucleus	29.51	26.01
CDY65546	Canola	nucleus	35.41	25.65
CDX92386	Canola	nucleus	35.08	25.36
CDX92385	Canola	nucleus	35.08	25.36
CDY09117	Canola	nucleus	34.75	25.06
CDY16617	Canola	nucleus	16.39	24.04
CDY20589	Canola	nucleus	30.16	23.41
CDY20977	Canola	nucleus	30.49	23.08
CDX97927	Canola	nucleus	31.8	22.4
CDY67277	Canola	cytosol, nucleus, plastid	31.48	22.07
CDX89453	Canola	plastid	31.15	21.02
CDY25588	Canola	plastid	31.15	20.93
CDY45921	Canola	mitochondrion	29.51	20.13
CDY35761	Canola	mitochondrion	29.18	19.91
CDY54516	Canola	mitochondrion	28.85	19.43
CDX86330	Canola	mitochondrion	28.85	19.3
CDY58774	Canola	plastid	31.48	19.2
CDX87288	Canola	plastid	31.48	19.16
CDX90134	Canola	mitochondrion	26.89	19.07
CDY63891	Canola	cytosol	29.51	18.52
CDX69371	Canola	mitochondrion	29.51	17.96
CDX95817	Canola	plastid	28.85	17.5
CDX92166	Canola	plastid	28.52	17.23
CDY35719	Canola	mitochondrion	25.9	15.9

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.5.2	Gene3D:2.60.260.20	GO:A0A078G685	UniProt:A0A078G685	EnsemblPlants:CDY20944
ProteinID:CDY20944	ProteinID:CDY20944.1	InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082
EnsemblPlantsGene:GSBRNA2T00015089001	InterPro:HSP40/DnaJ_pept-bd	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	PFAM:PF00226
PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR24078	PANTHER:PTHR24078:SF175
SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	UniParc:UPI0004EE8510	SEG:seg	:

Description

BnaA08g25810DBnaA08g25810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G685]

Coordinates

chrLK032115:-:11678..14115

Molecular Weight (calculated)

34345.9 Da

IEP (calculated)

9.643

GRAVY (calculated)

-0.769

Length

305 amino acids

Sequence
(BLAST)

001: MGVDYYNVLK VSKNANDDDL KKSYRRLAMK YHPDKNPTSK KEAEAKFKQI SEAYDVLSDP RRRQIYDQHG EEGLNYSSRR DDSEFRYYPR DAEDIFAEFF
101: GTAEAGGQAN KKTSPANKKA APANRKAADI ESALPCTLEE LYKGGKKKMR ISRLVPDEFG KPKTVQEILK IDIKPGWKKG TKITFPEKGN QEPGVTPADL
201: TFVVDEKPHP VYTRDGNDLI FEKKVSLIDA LTGVTVSLTT LDGRNLTIPV LDIVKPGHEI VIPNEGMPTK EPLKRGDLRV RFEILFPSRL TSEQKSDLKR
301: VLGGS

Best Arabidopsis Sequence Match ( AT1G10350.1 )
(BLAST)

001: MGVDYYNVLK VNRNANEDDL KKSYRRMAMK WHPDKNPTSK KEAEAKFKQI SEAYDVLSDP QRRQIYDQYG EEGLKSTDLP TAAETAAHQQ QRSYSSSNSE
101: FRYYPRDAED IFAEFFGESG DAFGGGSSGR TRGDGGDGGG RRFKSAEAGS QANRKTPPTN KKTTPPANRK APAIESKLAC TLEELYKGAK KKMRISRVVP
201: DDFGKPKTVQ EILKIDIKPG WKKGTKITFP EKGNQEPGVT PADLIFVVDE KPHSVFKRDG NDLILEKKVS LIDALTGLTI SVTTLDGRSL TIPVLDIVKP
301: GQEIVIPNEG MPTKDPLKRG DLRVTFEILF PSRLTSEQKN DLKRVLGGS

Arabidopsis Description

DNAJ heat shock family protein [Source:UniProtKB/TrEMBL;Acc:Q9SY77]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.