CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
extracellular 1
mitochondrion 2
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH45833	Soybean	cytosol	94.12	94.12
KRH69388	Soybean	cytosol	73.01	76.45
KRH74747	Soybean	cytosol	70.93	74.01
KRH63415	Soybean	cytosol	34.26	67.35
VIT_01s0026g01450.t01	Wine grape	cytosol	60.55	64.1
KRH61857	Soybean	cytosol, nucleus	23.18	57.76
PGSC0003DMT400007444	Potato	cytosol	61.25	57.1
KRH60063	Soybean	endoplasmic reticulum, golgi	39.1	57.07
PGSC0003DMT400045398	Potato	mitochondrion	60.55	56.27
Solyc05g006820.2.1	Tomato	plastid	60.21	55.95
Solyc04g005820.2.1	Tomato	cytosol, nucleus	61.94	55.94
CDY37986	Canola	cytosol	45.67	55.93
CDY20944	Canola	cytosol	56.4	53.44
AT1G59725.1	Thale cress	cytoskeleton, cytosol, nucleus	58.82	51.36
CDY20637	Canola	cytosol	56.06	50.62
KRH00241	Soybean	cytosol, nucleus	59.17	50.44
CDY45143	Canola	cytoskeleton, cytosol, nucleus	57.44	50.15
CDY30900	Canola	cytoskeleton, cytosol, nucleus	58.13	49.85
Bra027838.1-P	Field mustard	cytoskeleton, cytosol, nucleus	58.48	49.71
KRH54495	Soybean	nucleus	60.21	49.57
KRH49388	Soybean	cytosol	58.13	48.55
AT1G10350.1	Thale cress	cytosol	58.48	48.42
KRG88624	Soybean	nucleus	56.4	48.37
KRH10937	Soybean	cytosol	56.4	48.08
KRH65726	Soybean	nucleus	56.06	48.07
Bra018443.1-P	Field mustard	nucleus	57.79	47.85
KRH25647	Soybean	nucleus	57.79	47.85
KRH75968	Soybean	nucleus	55.71	47.77
KRH55895	Soybean	endoplasmic reticulum, nucleus	57.09	46.88
KRH52529	Soybean	cytosol	52.6	46.63
KRH40259	Soybean	cytosol	25.61	46.54
KRH21363	Soybean	cytosol	48.44	45.45
KRH10940	Soybean	cytosol	51.56	44.35
KRH21362	Soybean	cytosol	51.9	44.12
KRH12423	Soybean	cytoskeleton, cytosol, nucleus	39.79	43.73
KRH61858	Soybean	cytosol	17.99	36.62
KRH63417	Soybean	nucleus	25.26	35.96
KRH55068	Soybean	cytosol	15.57	32.85
KRG96505	Soybean	nucleus	34.6	29.15
KRH68242	Soybean	endoplasmic reticulum	33.91	28.57
KRH69236	Soybean	endoplasmic reticulum	31.83	26.59
KRH25334	Soybean	nucleus	36.68	25.42
KRG88903	Soybean	nucleus	36.68	25.42
KRH10414	Soybean	cytosol	33.22	25.2
KRH64663	Soybean	plastid	30.8	25.14
KRH26709	Soybean	nucleus	35.99	24.94
KRH22611	Soybean	nucleus	35.99	24.94
KRH66593	Soybean	endoplasmic reticulum	34.95	24.05
KRH48754	Soybean	endoplasmic reticulum	34.95	24.05
KRH44054	Soybean	cytosol	31.14	23.44
KRG90292	Soybean	cytosol, nucleus, plastid	20.07	20.28
KRH59311	Soybean	plastid	28.37	18.94
KRH43163	Soybean	plastid	28.37	18.76
KRG97564	Soybean	plastid	28.03	18.41
KRH23590	Soybean	nucleus	22.49	18.21
KRH31310	Soybean	nucleus, plastid	27.68	18.18
KRH27511	Soybean	mitochondrion	27.34	17.83
KRH36456	Soybean	mitochondrion	26.64	17.38
KRH09715	Soybean	nucleus, plastid	29.41	17.24
KRH43470	Soybean	mitochondrion	26.3	17.12
KRH13903	Soybean	mitochondrion	26.3	17.12
KRH44477	Soybean	plastid	25.95	16.89
KRH72418	Soybean	mitochondrion	25.61	15.78
KRH16800	Soybean	mitochondrion	25.61	15.78
KRH48662	Soybean	nucleus, plastid	25.95	14.29

Protein Annotations

Gene3D:1.10.287.110	EntrezGene:100810718	Gene3D:2.20.25.170	Gene3D:2.60.260.20	MapMan:35.1	EMBL:ACUP02010995
InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	EnsemblPlantsGene:GLYMA_18G127500	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd
UniProt:I1N198	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	EnsemblPlants:KRG99186	ProteinID:KRG99186
ProteinID:KRG99186.1	PFAM:PF00226	PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076
PANTHER:PTHR24078	PANTHER:PTHR24078:SF175	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	UniParc:UPI000233E852
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr18:-:17096119..17098853

Molecular Weight (calculated)

32889.8 Da

IEP (calculated)

9.852

GRAVY (calculated)

-0.669

Length

289 amino acids

Sequence
(BLAST)

001: MGAGDYYKIL KMNRNATDEE LKRAYKRLAM KWHPDKNHPH HHQHVTKEEA EAKFKQVSEA YDVLSDPKKR QIYDFYGHYP LNSMKVNEEN GDGDVNRVPK
101: GVKNVGVVES KLVCTLEELY KGCKKKLKIS KTIPHEFGKT KTVEEVLKIY IKPGWKKGTK ITFPGKGNQE AEATAPDDLI FVVDEKPHAL FKRDGNDLVV
201: TQKILLVEAL VGKTLNLTTL DGRELTIQVT EVVKPKYVLV VPNEGMPISK EPGKKGNLRI KFDVMFPSRL TSQQKYELKR ILSNSTADD

Best Arabidopsis Sequence Match ( AT1G59725.1 )
(BLAST)

001: MGVDYYNVLN VNPSATEDDL KKSYRRLAMK WHPDKNPTSI KQEAEAKFKQ ISEAYDVLSD PNKRQIYDQY GEDGLTATEA TASSQQHNYS SGNNNNYNAG
101: FRYYPRDAED IFAEFFGASE KVFDGGVGGG GRFKSAEAGS QTNRKTPVNR KAPAIESKLA CTLEELYKGG RRKMKISRVV PDGLGKSKPV EEILKIDITP
201: GWKKGTKITF PEKGNQEPGV TPADLIFVID EKPHSVYKRD GNDLIVDKKV SLLEALTGIT LSLTTLDGRN LTIPVLDIVK PGQEIVIPSE GMPISKEGSK
301: RGDLRINFEI CFPSRLTSEQ KTDLKRVLGG S

Arabidopsis Description

DNAJ heat shock family protein [Source:UniProtKB/TrEMBL;Acc:Q9XIF5]
SUBAcon: [cytoskeleton,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.