Factsheet for Bra018443.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
extracellular 1
mitochondrion 2
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20944	Canola	cytosol	86.53	99.02
AT1G10350.1	Thale cress	cytosol	83.67	83.67
Bra027838.1-P	Field mustard	cytoskeleton, cytosol, nucleus	73.64	75.59
PGSC0003DMT400007444	Potato	cytosol	55.87	62.9
KRH69388	Soybean	cytosol	49.28	62.32
Solyc05g006820.2.1	Tomato	plastid	55.01	61.74
KRH74747	Soybean	cytosol	49.0	61.73
PGSC0003DMT400045398	Potato	mitochondrion	54.73	61.41
Solyc04g005820.2.1	Tomato	cytosol, nucleus	55.87	60.94
Bra024199.1-P	Field mustard	cytoskeleton, cytosol, nucleus	55.87	60.75
Bra033783.1-P	Field mustard	cytosol	56.45	60.62
VIT_01s0026g01450.t01	Wine grape	cytosol	46.99	60.07
KRH45833	Soybean	cytosol	48.71	58.82
Bra031127.1-P	Field mustard	cytosol	56.73	58.58
Bra018099.1-P	Field mustard	cytosol	55.59	58.08
KRG99186	Soybean	cytosol	47.85	57.79
Bra009848.1-P	Field mustard	cytosol	51.86	57.28
Bra019519.1-P	Field mustard	cytosol	54.44	57.23
Bra029729.1-P	Field mustard	nucleus	53.58	57.01
Bra040063.1-P	Field mustard	cytoskeleton, cytosol, nucleus	52.15	55.83
Bra001337.1-P	Field mustard	cytoskeleton, cytosol, nucleus	53.3	55.69
Bra011031.1-P	Field mustard	cytosol	55.59	55.11
Bra020505.1-P	Field mustard	cytosol	51.86	54.35
KRH60063	Soybean	endoplasmic reticulum, golgi	27.79	48.99
Bra010365.1-P	Field mustard	mitochondrion	44.41	39.95
Bra007687.1-P	Field mustard	golgi	32.95	33.24
Bra003501.1-P	Field mustard	nucleus	31.52	29.65
Bra002385.1-P	Field mustard	nucleus	32.66	27.01
Bra006608.1-P	Field mustard	nucleus	31.52	26.96
Bra002386.1-P	Field mustard	nucleus	32.38	26.78
Bra036942.1-P	Field mustard	nucleus	26.65	26.65
Bra032204.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	27.51	26.52
Bra020169.1-P	Field mustard	nucleus	31.81	26.24
Bra018413.1-P	Field mustard	nucleus	28.65	24.88
Bra019886.1-P	Field mustard	nucleus	29.51	23.79
Bra030245.1-P	Field mustard	plastid	28.37	21.9
Bra035201.1-P	Field mustard	plastid	29.23	20.36
Bra020721.1-P	Field mustard	mitochondrion	26.07	20.36
Bra022249.1-P	Field mustard	cytosol, mitochondrion, plastid	26.07	19.87
Bra037514.1-P	Field mustard	mitochondrion	25.21	19.47
Bra010892.1-P	Field mustard	mitochondrion	23.5	19.07
Bra011820.1-P	Field mustard	cytosol	26.93	17.77
Bra014400.1-P	Field mustard	golgi	32.66	17.07

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.5.2	Gene3D:2.60.260.20	EnsemblPlantsGene:Bra018443	EnsemblPlants:Bra018443.1	EnsemblPlants:Bra018443.1-P
InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	UniProt:M4DPK2	PFAM:PF00226	PFAM:PF01556	PRINTS:PR00625
ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR24078	PANTHER:PTHR24078:SF175	SMART:SM00271	SUPFAM:SSF46565
SUPFAM:SSF49493	UniParc:UPI0002547F44	SEG:seg	:	:	:

Description

AT1G10350 (E=9e-143) | DNAJ heat shock protein, putative

Coordinates

chrA05:+:8247261..8249199

Molecular Weight (calculated)

38501.6 Da

IEP (calculated)

9.934

GRAVY (calculated)

-0.737

Length

349 amino acids

Sequence
(BLAST)

001: MGVDYYNVLK VSKNANDDDL KKSYRRLAMK YHPDKNPTSK KEAEAKFKQI SEAYDVLSDP RRRQIYDQHG EEGLKSSDLP SAAETASSAA AAAKQRSYSS
101: RRDDSEFRYY PRDAEDIFAE FFGTSRDSFA GGGTSGVGGG GRRFKSAEAG GQANKKTSPA NKKAAPANRK AADIESALPC TLEELYKGGK KKMRISRLVP
201: DEFGKPKTVQ EILKIDIKPG WKKGTKITFP EKGNQEPGVT PADLTFVVDE KPHPVYTRDG NDLIFEKKVS LIDALTGVTV SLTTLDGRNL TIPVLDIVKP
301: AHEIVIPNEG MPTKEPLKRG DLRVRFEVLF PSRLTSEQKS DLKRVLGGS

Best Arabidopsis Sequence Match ( AT1G10350.1 )
(BLAST)

001: MGVDYYNVLK VNRNANEDDL KKSYRRMAMK WHPDKNPTSK KEAEAKFKQI SEAYDVLSDP QRRQIYDQYG EEGLKSTDLP TAAETAAHQQ QRSYSSSNSE
101: FRYYPRDAED IFAEFFGESG DAFGGGSSGR TRGDGGDGGG RRFKSAEAGS QANRKTPPTN KKTTPPANRK APAIESKLAC TLEELYKGAK KKMRISRVVP
201: DDFGKPKTVQ EILKIDIKPG WKKGTKITFP EKGNQEPGVT PADLIFVVDE KPHSVFKRDG NDLILEKKVS LIDALTGLTI SVTTLDGRSL TIPVLDIVKP
301: GQEIVIPNEG MPTKDPLKRG DLRVTFEILF PSRLTSEQKN DLKRVLGGS

Arabidopsis Description

DNAJ heat shock family protein [Source:UniProtKB/TrEMBL;Acc:Q9SY77]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.