Factsheet for Bra036942.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
mitochondrion 3
nucleus 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY14974	Canola	nucleus	98.57	99.42
Bra032204.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	78.8	75.97
AT1G44160.1	Thale cress	mitochondrion	74.5	72.83
Os05t0427900-01	Rice	cytosol	21.49	47.47
GSMUA_Achr7P03030_001	Banana	cytosol	32.38	35.53
Solyc06g060240.1.1	Tomato	cytosol	36.96	33.59
TraesCS3A01G386400.1	Wheat	cytosol	30.37	33.12
Os01t0875700-01	Rice	cytosol	30.95	33.03
TraesCS1B01G278300.1	Wheat	cytosol	30.66	32.72
TraesCS3D01G379400.1	Wheat	cytosol	30.37	32.62
TraesCS1A01G267600.1	Wheat	cytosol	30.37	32.42
TraesCS1D01G267500.1	Wheat	cytosol	30.66	32.33
TraesCS3B01G418500.1	Wheat	cytosol	30.09	32.31
HORVU3Hr1G081940.1	Barley	cytosol	29.8	32.1
PGSC0003DMT400045241	Potato	extracellular, mitochondrion	35.24	31.95
KRH64663	Soybean	plastid	32.38	31.92
EES01846	Sorghum	cytosol	29.51	31.31
GSMUA_Achr8P32540_001	Banana	mitochondrion	24.93	31.3
Zm00001d012242_P001	Maize	cytosol	27.79	30.7
Bra024199.1-P	Field mustard	cytoskeleton, cytosol, nucleus	28.08	30.53
Bra029729.1-P	Field mustard	nucleus	28.65	30.49
Bra040063.1-P	Field mustard	cytoskeleton, cytosol, nucleus	28.37	30.37
Zm00001d038250_P001	Maize	cytosol	28.65	29.85
Bra009848.1-P	Field mustard	cytosol	26.93	29.75
Bra001337.1-P	Field mustard	cytoskeleton, cytosol, nucleus	28.37	29.64
Bra031127.1-P	Field mustard	cytosol	28.08	28.99
Bra011031.1-P	Field mustard	cytosol	29.23	28.98
Bra020505.1-P	Field mustard	cytosol	27.51	28.83
EES19566	Sorghum	cytosol	28.08	28.82
Bra018413.1-P	Field mustard	nucleus	31.23	27.11
Bra027838.1-P	Field mustard	cytoskeleton, cytosol, nucleus	26.36	27.06
Bra018443.1-P	Field mustard	nucleus	26.65	26.65
Bra019886.1-P	Field mustard	nucleus	32.38	26.1
Bra033783.1-P	Field mustard	cytosol	23.78	25.54
Bra018099.1-P	Field mustard	cytosol	24.07	25.15
Bra019519.1-P	Field mustard	cytosol	23.78	25.0
Zm00001d042653_P001	Maize	plastid	28.65	25.0
Bra010365.1-P	Field mustard	mitochondrion	26.07	23.45
Bra007687.1-P	Field mustard	golgi	20.63	20.81
HORVU0Hr1G000620.4	Barley	plastid	23.5	20.76
TraesCS6A01G421300.1	Wheat	cytosol	11.17	18.48
Bra003501.1-P	Field mustard	nucleus	19.48	18.33
Bra002386.1-P	Field mustard	nucleus	20.92	17.3
Bra002385.1-P	Field mustard	nucleus	20.92	17.3
Bra020169.1-P	Field mustard	nucleus	20.92	17.26
HORVU7Hr1G073040.2	Barley	cytosol	11.17	16.81
Bra006608.1-P	Field mustard	nucleus	19.48	16.67
Bra030245.1-P	Field mustard	plastid	17.19	13.27
Bra010892.1-P	Field mustard	mitochondrion	16.05	13.02
Bra020721.1-P	Field mustard	mitochondrion	14.9	11.63
Bra037514.1-P	Field mustard	mitochondrion	14.61	11.28
Bra035201.1-P	Field mustard	plastid	16.05	11.18
Bra022249.1-P	Field mustard	cytosol, mitochondrion, plastid	14.33	10.92
Bra014400.1-P	Field mustard	golgi	20.06	10.48
Bra011820.1-P	Field mustard	cytosol	15.76	10.4

Protein Annotations

EnsemblPlants:Bra036942.1	EnsemblPlants:Bra036942.1-P	EnsemblPlantsGene:Bra036942	Gene3D:2.60.260.20	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:DnaJ_C
InterPro:HSP40/DnaJ_pept-bd	PANTHER:PTHR24078	PANTHER:PTHR24078:SF522	PFAM:PF01556	SEG:seg	SUPFAM:SSF49493
UniParc:UPI000253E68F	UniProt:M4F782	MapMan:35.2	:	:	:

Description

AT1G44160 (E=1e-112) | DNAJ chaperone C-terminal domain-containing protein

Coordinates

chrScaffold000123:+:176267..177489

Molecular Weight (calculated)

38572.0 Da

IEP (calculated)

9.669

GRAVY (calculated)

-0.627

Length

349 amino acids

Sequence
(BLAST)

001: MATQGVGQPS TKKRSFLLRD IFKICRSISS VLPREKPNHK HERKLHTESK RHEDHKSNVT NQPNAFNFQE AKATKVEGAS LCKVPSYNRL DSVGHKKPLS
101: LSRSYSHNTA TAAVRKSSSC IGMSKSSSNR TDSAGFMSSL RRSTTTSPRS FANPILYSTS SEKVAKPQPT EKTLSCTLEE LCNGCTKKIK IKRDLTTTSG
201: QLSEEEETVE IKVKPGWKGG TKVTFEGKGN EAMGSCVPAD LTFVIVEEEH EVFKRKGDDL EMVVEVSLLE ALTGFELCVA LPDGDNMSLK IEDVIHPGYV
301: TVIHGKGMPK PKDKGKTRGD LRVLFRAKFP EQLTDAQRAE IQSILQNDS

Best Arabidopsis Sequence Match ( AT1G44160.1 )
(BLAST)

001: MATQGMAQPS AKKRSFLLRD LFKLCRSISR VLPRDKTKHH HKAKHDTKET KRLDEEHKRN TPNAFEFRET KGIGKNNKVE GVSLCKVRSY RFDNTNTNFV
101: GSKKSLSRSC SQNTATATST NPTLRSLSFI GRSKSSSNRM TESGGFMPTL MRSTTTVPRS FANPILYSSS SAKVAKPSPT EKKLRCTLEE LCNGCTKKIK
201: IKRDVITSLG EKCEEEEMVE IKVKPGWKGG TKVTFEGKGN EAMRSVPADL TFVIVEKEHE VFKREGDDLE MAVEVSLLEA LTGCELSVAL LDGDNMRLRI
301: EDVIHPGYVT VVQGKGMPNL KEKGKRGDLR VRFRTKFPQH LTDEQRAEIH SILQDSS

Arabidopsis Description

HSP40/DnaJ peptide-binding protein [Source:UniProtKB/TrEMBL;Acc:Q0WRX5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.