CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038250_P001	Maize	cytosol	82.35	83.58
TraesCS1B01G278300.1	Wheat	cytosol	66.47	69.11
TraesCS1A01G267600.1	Wheat	cytosol	66.18	68.81
TraesCS1D01G267500.1	Wheat	cytosol	65.88	67.67
Os05t0427900-01	Rice	cytosol	30.88	66.46
EES01846	Sorghum	cytosol	59.41	61.4
GSMUA_Achr7P03030_001	Banana	cytosol	48.82	52.2
HORVU0Hr1G000620.4	Barley	plastid	42.35	36.46
GSMUA_Achr8P32540_001	Banana	mitochondrion	28.24	34.53
Solyc11g044450.1.1	Tomato	nucleus	34.41	34.01
PGSC0003DMT400062759	Potato	cytosol	34.12	33.43
EES13688	Sorghum	cytosol	32.65	31.27
KRH10414	Soybean	cytosol	34.71	30.97
KRH44054	Soybean	cytosol	34.71	30.73
EES19943	Sorghum	cytosol	32.65	30.66
EES17644	Sorghum	cytosol	27.94	30.35
EES14600	Sorghum	cytosol	30.59	30.32
KXG29372	Sorghum	cytosol	30.0	30.18
VIT_12s0034g02190.t01	Wine grape	nucleus	30.0	29.74
KRH64663	Soybean	plastid	30.29	29.1
EES02163	Sorghum	cytosol	28.82	29.08
CDY66166	Canola	plastid	29.12	28.45
CDY14974	Canola	nucleus	28.82	28.32
AT1G44160.1	Thale cress	mitochondrion	29.71	28.29
Bra036942.1-P	Field mustard	nucleus	28.82	28.08
Solyc06g060240.1.1	Tomato	cytosol	30.59	27.08
Bra032204.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	28.82	27.07
PGSC0003DMT400045241	Potato	extracellular, mitochondrion	30.29	26.75
Bra018413.1-P	Field mustard	nucleus	31.18	26.37
CDY20977	Canola	nucleus	30.88	26.05
CDY20589	Canola	nucleus	30.0	25.95
Bra019886.1-P	Field mustard	nucleus	31.18	24.48
CDX97927	Canola	nucleus	31.18	24.48
CDY67277	Canola	cytosol, nucleus, plastid	31.18	24.37
AT1G11040.1	Thale cress	cytosol, nucleus, plastid	31.18	24.2
KRG90292	Soybean	cytosol, nucleus, plastid	19.41	23.08
KXG32445	Sorghum	endoplasmic reticulum	22.35	21.97
EES17752	Sorghum	endoplasmic reticulum, golgi	22.06	21.43
KXG37403	Sorghum	cytosol	25.29	20.57
EER93745	Sorghum	nucleus	24.41	19.81
EES07516	Sorghum	nucleus	24.41	19.76
OQU82085	Sorghum	nucleus	24.12	19.62
EER89093	Sorghum	mitochondrion, plastid	19.12	14.94
KXG19604	Sorghum	mitochondrion	20.0	14.62
KXG31305	Sorghum	plastid	21.18	14.49
EES15725	Sorghum	mitochondrion, plastid	17.35	14.08
EES13204	Sorghum	plastid	18.24	13.84
OQU92981	Sorghum	plastid	18.24	11.5

Protein Annotations

Gene3D:1.10.287.110	Gene3D:2.60.260.20	MapMan:35.1	EntrezGene:8077144	UniProt:C5YYA7	InterPro:DnaJ_C
InterPro:DnaJ_domain	EnsemblPlants:EES19566	ProteinID:EES19566	ProteinID:EES19566.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd
InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	PFAM:PF00226	PFAM:PF01556	PRINTS:PR00625
PFscan:PS50076	PANTHER:PTHR24078	PANTHER:PTHR24078:SF517	SMART:SM00271	EnsemblPlantsGene:SORBI_3009G146400	SUPFAM:SSF46565
SUPFAM:SSF49493	UniParc:UPI0001A89423	RefSeq:XP_002441136.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr9:-:50325863..50328782

Molecular Weight (calculated)

37220.7 Da

IEP (calculated)

10.082

GRAVY (calculated)

-0.501

Length

340 amino acids

Sequence
(BLAST)

001: MGKGDKPPPE LYYEILHVAR DASPQGVRAA YRSLVRQWHP DKHPPESRPE AEARFKAITE AYEALLDQQV NRAAAFAARD GGRRRSSSPA DKDHRAAAAA
101: VPGMAARSSE KAGGGAAPCT PAREEPPLPV KKVYSACSNV GRGRRAFAEF SSYVVRKAPP LERRVECTLE ELCSGCNKEV RYTRDVVTKN GLITKKEVTQ
201: TVRVKPGMRK GAAVTLEGAG DERPGCLTGD AVFVISEKRH KRFKRLGDDL VLRARVPLVS ALTGWQLSFR LLGGDKFRYA FRDEVICPGY VKVVKGHGMP
301: VAGGDRGAHG DLMVKFDVVF PENLTDQQRK GLAEILRGCD

Best Arabidopsis Sequence Match ( AT1G11040.1 )
(BLAST)

001: MGTPRSPATD FFGISKTACK AYKSLVTKLH PLSSHRKSES HSDADSAIHR RYLEEKFAEE DDLIAARRGL RLQSMDDSSV FKRRSSLLSN SSSRRSHTPQ
101: ARPTYLSSSA SSNRRSAFSR STSRRDEGSS HSGVRSHGLK SRPISNNTSP MTSPFTSPRG KDQTLGDLFG SVKKLSSPTS NSPINGVKQS SPSSISKSAS
201: KRDKDERGST SSATSTSLPY SKSKSTRDTA GSIAKSISRR STTPIVFSQS TPPKKPPAVE KKLECTLEEL CHGGVKNIKI KRDIITDEGL IMQQEEMLRV
301: NIQPGWKKGT KITFEGVGNE KPGYLPEDIT FVVEEKRHPL FKRRGDDLEI AVEIPLLKAL TGCKLSVPLL SGESMSITVG DVIFHGFEKA IKGQGMPNAK
401: EEGKRGDLRI TFLVNFPEKL SEEQRSMAYE VLKDCSWA

Arabidopsis Description

DNAJ chaperone C-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:O04087]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.