CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0549600-01	Rice	cytosol	84.69	85.1
EES07516	Sorghum	nucleus	82.78	82.38
GSMUA_Achr8P11020_001	Banana	nucleus	73.21	76.5
GSMUA_Achr11P...	Banana	cytosol	69.62	76.38
KRH66593	Soybean	endoplasmic reticulum	72.97	72.62
KRH48754	Soybean	endoplasmic reticulum	72.97	72.62
PGSC0003DMT400066980	Potato	nucleus	71.53	71.19
EER93745	Sorghum	nucleus	71.29	71.12
Solyc01g090550.2.1	Tomato	nucleus	71.77	70.75
KXG37403	Sorghum	cytosol	70.33	70.33
VIT_15s0021g02090.t01	Wine grape	cytosol	74.16	69.98
PGSC0003DMT400018083	Potato	nucleus	70.1	69.93
Solyc05g050820.2.1	Tomato	cytosol	34.45	60.5
Solyc05g050810.2.1	Tomato	nucleus	31.58	51.36
EES17752	Sorghum	endoplasmic reticulum, golgi	30.62	36.57
EES02163	Sorghum	cytosol	28.95	35.91
EES17644	Sorghum	cytosol	26.08	34.82
EES14600	Sorghum	cytosol	28.23	34.4
KXG32445	Sorghum	endoplasmic reticulum	28.23	34.1
EES19943	Sorghum	cytosol	28.47	32.87
EES13688	Sorghum	cytosol	26.08	30.7
KXG29372	Sorghum	cytosol	24.64	30.47
EES13204	Sorghum	plastid	27.75	25.89
EES01846	Sorghum	cytosol	19.62	24.92
EER89093	Sorghum	mitochondrion, plastid	25.36	24.37
EES19566	Sorghum	cytosol	19.62	24.12
KXG31305	Sorghum	plastid	27.99	23.54
KXG19604	Sorghum	mitochondrion	24.16	21.72
EES15725	Sorghum	mitochondrion, plastid	21.77	21.72
OQU92981	Sorghum	plastid	24.88	19.3

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.5.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	EntrezGene:8083362	UniProt:A0A1Z5RF65
InterPro:DnaJ	InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150
GO:GO:0009408	GO:GO:0009628	GO:GO:0009987	GO:GO:0031072	GO:GO:0046872	GO:GO:0051082
InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305	InterPro:IPR001623	InterPro:IPR036869
InterPro:J_dom_sf	HAMAP:MF_01152	EnsemblPlants:OQU82085	ProteinID:OQU82085	ProteinID:OQU82085.1	PFAM:PF00226
PFAM:PF00684	PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PFscan:PS51188
PANTHER:PTHR43888	PANTHER:PTHR43888:SF1	SMART:SM00271	EnsemblPlantsGene:SORBI_3006G169800	SUPFAM:SSF46565	SUPFAM:SSF49493
SUPFAM:SSF57938	UniParc:UPI0001A86F96	RefSeq:XP_002446897.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr6:+:52647113..52661739

Molecular Weight (calculated)

47087.9 Da

IEP (calculated)

7.126

GRAVY (calculated)

-0.753

Length

418 amino acids

Sequence
(BLAST)

001: MFGRAPRRSN NTKYYEVLGV SNTASQDELK KAYRKAAIKS HPDKGGDPEK FKELSQAYEV LSDPEKREIY DQYGEDGLKE GMGGGSDYHN PFDIFEQFFG
101: GGAFGGSSSR VRRQKRGDDV VHSLKVSLED VYNGATKRLS LSRNVLCSKC KGKGTMSGAP GTCYGCHGVG MRTITRQIGL GMIQQMNTVC PECRGTGEII
201: SERDRCPSCR ASKVVQERKV LEVHIEKGMQ HGQKIVFQGE ADQAPDTVTG DIVFVLQVKE HPRFKRKYDD LFIEHTISLT EALCGFQFIL THLDGRQLLI
301: KSNPGEIIQP GQHKAINDEG MPQHGRSFMK GRLFVEFNVE FPESGALSPD QCRALEKVLP QRPRAQLSDM EVDQCEETIM HDVNMEEEMR RRKHQRRQEA
401: YNEDEEDAGP SRVQCAQQ

Best Arabidopsis Sequence Match ( AT5G22060.1 )
(BLAST)

001: MFGRGPSRKS DNTKFYEILG VPKTAAPEDL KKAYKKAAIK NHPDKGGDPE KFKELAQAYE VLSDPEKREI YDQYGEDALK EGMGGGGGGH DPFDIFSSFF
101: GSGGHPFGSH SRGRRQRRGE DVVHPLKVSL EDVYLGTTKK LSLSRKALCS KCNGKGSKSG ASMKCGGCQG SGMKISIRQF GPGMMQQVQH ACNDCKGTGE
201: TINDRDRCPQ CKGEKVVSEK KVLEVNVEKG MQHNQKITFS GQADEAPDTV TGDIVFVIQQ KEHPKFKRKG EDLFVEHTIS LTEALCGFQF VLTHLDKRQL
301: LIKSKPGEVV KPDSYKAISD EGMPIYQRPF MKGKLYIHFT VEFPESLSPD QTKAIEAVLP KPTKAAISDM EIDDCEETTL HDVNIEDEMK RKAQAQREAY
401: DDDEEDHPGG AQRVQCAQQ

Arabidopsis Description

ATJ2At5g22060 [Source:UniProtKB/TrEMBL;Acc:Q0V7U1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.