Factsheet for VIT_15s0021g02090.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH66593	Soybean	endoplasmic reticulum	74.49	78.57
GSMUA_Achr11P...	Banana	cytosol	67.49	78.48
KRH48754	Soybean	endoplasmic reticulum	73.81	77.86
GSMUA_Achr8P11020_001	Banana	nucleus	69.53	77.0
VIT_13s0073g00560.t01	Wine grape	cytosol	72.23	76.92
EES07516	Sorghum	nucleus	72.46	76.43
PGSC0003DMT400066980	Potato	nucleus	72.46	76.43
Solyc01g090550.2.1	Tomato	nucleus	72.91	76.18
PGSC0003DMT400018083	Potato	nucleus	71.78	75.89
VIT_06s0080g01230.t01	Wine grape	cytosol	71.33	75.78
TraesCS6D01G232600.1	Wheat	nucleus	72.46	75.53
TraesCS6B01G274600.1	Wheat	nucleus	72.46	75.53
TraesCS6A01G250800.1	Wheat	nucleus	72.46	75.53
Zm00001d017476_P001	Maize	plasma membrane	71.78	75.36
OQU82085	Sorghum	nucleus	69.98	74.16
Os04t0549600-01	Rice	cytosol	69.07	73.56
Os02t0656500-01	Rice	nucleus	69.53	73.33
HORVU0Hr1G016360.1	Barley	cytosol	28.44	71.19
HORVU0Hr1G018300.1	Barley	plastid	72.69	66.53
VIT_01s0026g01450.t01	Wine grape	cytosol	23.7	38.46
VIT_07s0005g01220.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	29.35	37.68
VIT_10s0003g00260.t01	Wine grape	cytosol	27.99	36.26
VIT_08s0105g00350.t01	Wine grape	cytosol	27.54	36.09
VIT_04s0008g04300.t01	Wine grape	cytosol	26.19	34.22
VIT_17s0000g05530.t01	Wine grape	cytoskeleton, cytosol, nucleus	26.86	34.1
VIT_09s0002g07210.t01	Wine grape	plastid	27.09	24.54
VIT_13s0064g01360.t01	Wine grape	mitochondrion	24.38	23.95
VIT_00s0324g00040.t01	Wine grape	plastid	25.51	23.49
VIT_17s0000g02030.t01	Wine grape	plastid	24.61	22.66
VIT_18s0001g06970.t01	Wine grape	endoplasmic reticulum, extracellular	16.93	21.61
VIT_12s0034g02190.t01	Wine grape	nucleus	13.77	17.78

Protein Annotations

Gene3D:1.10.287.110	EntrezGene:100242705	wikigene:100242705	MapMan:19.1.5.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20
ProteinID:CCB43865	ProteinID:CCB43865.1	InterPro:DnaJ	InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS
UniProt:F6GV82	EMBL:FN594952	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009408	GO:GO:0009628
GO:GO:0009987	GO:GO:0031072	GO:GO:0046872	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom
InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	EntrezGene:LOC100242705
wikigene:LOC100242705	HAMAP:MF_01152	PFAM:PF00226	PFAM:PF00684	PFAM:PF01556	PRINTS:PR00625
ScanProsite:PS00636	PFscan:PS50076	PFscan:PS51188	PANTHER:PTHR43888	PANTHER:PTHR43888:SF11	SMART:SM00271
SUPFAM:SSF46565	SUPFAM:SSF49493	SUPFAM:SSF57938	TIGR:TC58599	UniParc:UPI0002109CEC	ArrayExpress:VIT_15s0021g02090
EnsemblPlantsGene:VIT_15s0021g02090	EnsemblPlants:VIT_15s0021g02090.t01	unigene:Vvi.13190	RefSeq:XP_002275918	RefSeq:XP_002275918.1	SEG:seg

Description

No Description!

Coordinates

chr15:+:12895594..12909716

Molecular Weight (calculated)

49335.2 Da

IEP (calculated)

6.870

GRAVY (calculated)

-0.821

Length

443 amino acids

Sequence
(BLAST)

001: MFGRPPRRSD STKYYDILGV SKNANQDELK KAYKKAAIKN HPDKGGDPEK FKELSQAYDV LSDPDKREIY DQYGEDGLKE GMGGGGGFHN PVDIFESFFG
101: GGAFGGGGSS RGRRQKRGED VVHTLKVSLE DLYNGTSKKL SLSRNVMCPK CKGKGSKSGA SGRCYGCQGS GMKITTRQIA PGMIQQMQHV CHECRGSGEV
201: ISERDRCPQC KGNKVSTEKK VLEVHVEKGM QHGERIVFQG EADQAPDTIT GDIVFVLQLK DHAKFKRKYD DLYVEHTLSL TEALCGFQFA LTHLDGRQLL
301: IKSNPGEIIK PDQYKAINDE GMPHHQRPFM KGKLYIHFDV EFPESGILSP DQCKALESIL PQKRSKQISA MEVDEAEETT LYDVNIEEEM RRKQQQQQHE
401: AYDEDDDDFG APRVQCVTVA SKGPRSEVDR EGGNLNLEGK ATG

Best Arabidopsis Sequence Match ( AT5G22060.1 )
(BLAST)

001: MFGRGPSRKS DNTKFYEILG VPKTAAPEDL KKAYKKAAIK NHPDKGGDPE KFKELAQAYE VLSDPEKREI YDQYGEDALK EGMGGGGGGH DPFDIFSSFF
101: GSGGHPFGSH SRGRRQRRGE DVVHPLKVSL EDVYLGTTKK LSLSRKALCS KCNGKGSKSG ASMKCGGCQG SGMKISIRQF GPGMMQQVQH ACNDCKGTGE
201: TINDRDRCPQ CKGEKVVSEK KVLEVNVEKG MQHNQKITFS GQADEAPDTV TGDIVFVIQQ KEHPKFKRKG EDLFVEHTIS LTEALCGFQF VLTHLDKRQL
301: LIKSKPGEVV KPDSYKAISD EGMPIYQRPF MKGKLYIHFT VEFPESLSPD QTKAIEAVLP KPTKAAISDM EIDDCEETTL HDVNIEDEMK RKAQAQREAY
401: DDDEEDHPGG AQRVQCAQQ

Arabidopsis Description

ATJ2At5g22060 [Source:UniProtKB/TrEMBL;Acc:Q0V7U1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.