Factsheet for VIT_18s0001g06970.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

plastid 2
extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH16800	Soybean	mitochondrion	64.55	47.76
KRH72418	Soybean	mitochondrion	64.55	47.76
AT1G28210.2	Thale cress	mitochondrion	58.5	47.54
Solyc01g081330.2.1	Tomato	plastid	58.21	46.54
Bra010892.1-P	Field mustard	mitochondrion	55.33	44.65
CDX90134	Canola	mitochondrion	55.33	44.65
GSMUA_Achr6P02160_001	Banana	mitochondrion	60.52	44.4
KXG19604	Sorghum	mitochondrion	52.74	39.35
TraesCS7A01G176600.1	Wheat	mitochondrion	53.6	39.08
TraesCS7D01G177900.1	Wheat	mitochondrion	53.89	39.04
TraesCS7B01G081600.2	Wheat	mitochondrion	53.89	38.88
CDY35719	Canola	mitochondrion	55.62	38.83
Zm00001d044878_P002	Maize	mitochondrion	44.09	31.22
VIT_13s0064g01360.t01	Wine grape	mitochondrion	34.58	26.61
VIT_09s0002g07210.t01	Wine grape	plastid	29.97	21.27
VIT_00s0324g00040.t01	Wine grape	plastid	28.82	20.79
VIT_01s0026g01450.t01	Wine grape	cytosol	15.85	20.15
VIT_17s0000g02030.t01	Wine grape	plastid	27.67	19.96
VIT_08s0105g00350.t01	Wine grape	cytosol	18.73	19.23
VIT_10s0003g00260.t01	Wine grape	cytosol	18.73	19.01
VIT_13s0073g00560.t01	Wine grape	cytosol	22.77	18.99
VIT_06s0080g01230.t01	Wine grape	cytosol	22.48	18.7
VIT_04s0008g04300.t01	Wine grape	cytosol	17.58	17.99
VIT_17s0000g05530.t01	Wine grape	cytoskeleton, cytosol, nucleus	17.87	17.77
VIT_07s0005g01220.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	17.0	17.1
VIT_15s0021g02090.t01	Wine grape	cytosol	21.61	16.93
VIT_12s0034g02190.t01	Wine grape	nucleus	12.1	12.24

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.3.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	ProteinID:CCB45618	ProteinID:CCB45618.1
InterPro:DnaJ_C	InterPro:DnaJ_domain	UniProt:F6H0Z6	EMBL:FN595227	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0031072	GO:GO:0046872	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom
InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	PFAM:PF00226
PFAM:PF00684	PFAM:PF01556	PRINTS:PR00625	PFscan:PS51188	PANTHER:PTHR43096	PANTHER:PTHR43096:SF27
SUPFAM:SSF46565	SUPFAM:SSF49493	SUPFAM:SSF57938	TMHMM:TMhelix	UniParc:UPI00021089B1	ArrayExpress:VIT_18s0001g06970
EnsemblPlantsGene:VIT_18s0001g06970	EnsemblPlants:VIT_18s0001g06970.t01	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr18:-:5184425..5218375

Molecular Weight (calculated)

38435.3 Da

IEP (calculated)

8.344

GRAVY (calculated)

-0.207

Length

347 amino acids

Sequence
(BLAST)

001: MGRFGWLGLF CTVTTFFMGS LLILQPWEYH QQRGIFMLQL AKKFHPDANK NNPYAKRKFQ EIRDAYEIFE HETENFATDI QVELSLSFSE AAKGCTKHLS
101: FDAYIPCDSC YGRGHPVDAK TKVCPICKGI GRVTIPPFTS TCSSCKGLGR IVKEHCTTCR GSGVVEGVKD VEVVIPAGVD SGDTIHVPKV GNAGGRGVEP
201: GNLYIKLKAQ LYLFHSVAKD RTFVRDGADV YVESSISFTQ AILGGTVEVP TLSGKMQLKI PKGVQPGQLL VLRGKGLPKH GLLVDHGDQY VRFRINFPTA
301: INERQRAILE EFAKEEIVHD SSTSGEGNCQ GKILKIVAWD YYNQELK

Best Arabidopsis Sequence Match ( AT1G28210.1 )
(BLAST)

001: MRRFNWVLRH VQARRTFDSA IGLRQGSQKP LFERYIHATG INNSSARNYY DVLGVSPKAT REEIKKSFHE LAKKFHPDTN RNNPSAKRKF QEIREAYETL
101: GNSERREEYD KLQYRNSDYV NNDGGDSERF RRAYQSNFSD TFHKIFSEIF ENNQIKPDIR VELSLSLSEA AEGCTKRLSF DAYVFCDSCD GLGHPSDAAM
201: SICPTCRGVG RVTIPPFTAS CQTCKGTGHI IKEYCMSCRG SGIVEGTKTA ELVIPGGVES EATITIVGAG NVSSRTSQPG NLYIKLKVAN DSTFTRDGSD
301: IYVDANISFT QAILGGKVVV PTLSGKIQLD IPKGTQPDQL LVLRGKGLPK QGFFVDHGDQ YVRFRVNFPT EVNERQRAIL EEFAKEEINN ELSDSAEGSW
401: LYQKLSTG

Arabidopsis Description

ATJ1DNAJ heat shock family protein [Source:UniProtKB/TrEMBL;Acc:F4HWI4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.