CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G176600.1	Wheat	mitochondrion	70.11	68.49
TraesCS7D01G177900.1	Wheat	mitochondrion	70.11	68.06
TraesCS7B01G081600.2	Wheat	mitochondrion	70.32	67.98
Zm00001d044878_P002	Maize	mitochondrion	71.61	67.96
GSMUA_Achr6P02160_001	Banana	mitochondrion	54.62	53.7
VIT_18s0001g06970.t01	Wine grape	endoplasmic reticulum, extracellular	39.35	52.74
AT1G28210.2	Thale cress	mitochondrion	44.73	48.71
KRH72418	Soybean	mitochondrion	48.17	47.76
KRH16800	Soybean	mitochondrion	48.17	47.76
Solyc01g081330.2.1	Tomato	plastid	42.15	45.16
CDX90134	Canola	mitochondrion	41.72	45.12
Bra010892.1-P	Field mustard	mitochondrion	41.51	44.88
CDY35719	Canola	mitochondrion	41.08	38.43
EER89093	Sorghum	mitochondrion, plastid	35.48	37.93
EES15725	Sorghum	mitochondrion, plastid	33.76	37.47
EES13204	Sorghum	plastid	26.24	27.23
KXG32445	Sorghum	endoplasmic reticulum	19.35	26.01
EES19943	Sorghum	cytosol	20.22	25.97
EES17644	Sorghum	cytosol	16.99	25.24
EES17752	Sorghum	endoplasmic reticulum, golgi	18.92	25.14
KXG31305	Sorghum	plastid	26.67	24.95
EES02163	Sorghum	cytosol	18.06	24.93
OQU82085	Sorghum	nucleus	21.72	24.16
EER93745	Sorghum	nucleus	21.72	24.11
KXG37403	Sorghum	cytosol	21.08	23.45
EES07516	Sorghum	nucleus	21.08	23.33
EES14600	Sorghum	cytosol	16.13	21.87
OQU92981	Sorghum	plastid	25.16	21.71
EES01846	Sorghum	cytosol	15.05	21.28
EES13688	Sorghum	cytosol	16.13	21.13
KXG29372	Sorghum	cytosol	14.62	20.12
EES19566	Sorghum	cytosol	14.62	20.0

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.3.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	UniProt:A0A194YI07	InterPro:DnaJ
InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009408
GO:GO:0009628	GO:GO:0009987	GO:GO:0031072	GO:GO:0046872	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd
InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf
EnsemblPlants:KXG19604	ProteinID:KXG19604	ProteinID:KXG19604.1	HAMAP:MF_01152	PFAM:PF00226	PFAM:PF00684
PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PFscan:PS51188	PANTHER:PTHR43096
PANTHER:PTHR43096:SF27	SMART:SM00271	EnsemblPlantsGene:SORBI_3010G086300	SUPFAM:SSF46565	SUPFAM:SSF49493	SUPFAM:SSF57938
UniParc:UPI0007F28088	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:7417079..7427712

Molecular Weight (calculated)

51855.0 Da

IEP (calculated)

9.190

GRAVY (calculated)

-0.385

Length

465 amino acids

Sequence
(BLAST)

001: MGRFGWLRHA SRFLAPRSGE VAVQRCAWMQ PNTPCSTTGI YIGDKFYGRF ILTPFVLSRS FHATGHRCSE HKDYYKILGV PKDASQDDIK KAFHSLAKKY
101: HPDTNRGNTA AKRMFQEIRD AYETLRDPSK REQYDMLFSR GSRMEHDTFS GSNNQRHDPF TEFHRQNDGR FSSKFYKIFS EVFQQDINAQ ANDIKVELNL
201: SFSEAANGCI KQVSYSAKNV CDSCGGRGHL PNAKIYVCPS CKGLGRVTMY PFTTVCSSCR GVGKVIKDYC LTCQGSGVVD GMKHVKLDIP AGLDSGDTIN
301: VPEAGDSGGL GVRSGNLHIK IQVEIDPVFT RDGADIHVDK RISFTQAVLG GKVEVPSLNG KTEVKIPKGV QPGQVVVLRG KGLPDPSGYF GDQYVRFRIH
401: FPSVVTERQR ALLEEFAVEE ATKEQNTFVA GNWWRLVAEN MTRQNVMIGV GILVLIHLML SKAMS

Best Arabidopsis Sequence Match ( AT1G28210.2 )
(BLAST)

001: MRRFNWVLRH VQARRTFDSA IGLRQGSQKP LFERYIHATG INNSSARNYY DVLGVSPKAT REEIKKSFHE LAKKFHPDTN RNNPSAKRKF QEIREAYETL
101: GNSERREEYD KLQYRNSDYV NNDGGDSERF RRAYQSNFSD TFHKIFSEIF ENNQIKPDIR VELSLSLSEA AEGCTKRLSF DAYVFCDSCD GLGHPSDAAM
201: SICPTCRGVG RVTIPPFTAS CQTCKGTGHI IKEYCMSCRG SGIVEGTKTA ELVIPGGVES EATITIVGAG NVSSRTSQPG NLYIKLKVAN DSTFTRDGSD
301: IYVDANISFT QAILGGKVVV PTLSGKIQLD IPKGTQPDQL LVLRGKGLPK QGFFVDHGDQ YVRFRVNFPT EVNERQRAIL EEFAKEEINN ELSDSAEGSW
401: WNLTGPQIIR DFSLMVLLAL LLSRLMG

Arabidopsis Description

ATJ1DNAJ heat shock family protein [Source:UniProtKB/TrEMBL;Acc:F4HWI4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.