CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra010892.1-P	Field mustard	mitochondrion	99.77	99.77
AT1G28210.2	Thale cress	mitochondrion	82.09	82.67
CDY35719	Canola	mitochondrion	93.02	80.48
VIT_18s0001g06970.t01	Wine grape	endoplasmic reticulum, extracellular	44.65	55.33
KRH72418	Soybean	mitochondrion	57.44	52.67
KRH16800	Soybean	mitochondrion	57.21	52.45
Solyc01g081330.2.1	Tomato	plastid	48.14	47.7
GSMUA_Achr6P02160_001	Banana	mitochondrion	46.98	42.71
KXG19604	Sorghum	mitochondrion	45.12	41.72
TraesCS7A01G176600.1	Wheat	mitochondrion	44.65	40.34
TraesCS7B01G081600.2	Wheat	mitochondrion	44.65	39.92
TraesCS7D01G177900.1	Wheat	mitochondrion	44.42	39.87
CDY45921	Canola	mitochondrion	33.72	32.44
CDY35761	Canola	mitochondrion	33.49	32.21
CDX86330	Canola	mitochondrion	33.72	31.8
Zm00001d044878_P002	Maize	mitochondrion	36.05	31.63
CDY54516	Canola	mitochondrion	33.26	31.57
CDY20944	Canola	cytosol	19.07	26.89
CDY37986	Canola	cytosol	14.19	25.85
CDY20637	Canola	cytosol	18.84	25.31
CDX89453	Canola	plastid	25.81	24.56
CDY25588	Canola	plastid	25.81	24.45
CDY05498	Canola	cytosol	18.84	24.32
CDY54902	Canola	cytosol	18.84	24.32
CDY11430	Canola	golgi	19.53	24.28
CDX76646	Canola	golgi	19.53	24.28
CDX97443	Canola	cytosol	16.98	24.25
CDY45143	Canola	cytoskeleton, cytosol, nucleus	18.6	24.17
CDX92166	Canola	plastid	28.37	24.16
CDY30900	Canola	cytoskeleton, cytosol, nucleus	18.84	24.04
CDX95817	Canola	plastid	27.67	23.66
CDY59898	Canola	endoplasmic reticulum, golgi	19.07	23.63
CDY58657	Canola	cytosol	17.91	23.62
CDY58774	Canola	plastid	27.44	23.6
CDX67894	Canola	endoplasmic reticulum, golgi	17.91	23.55
CDX88188	Canola	cytosol	17.44	23.36
CDX80523	Canola	cytosol	17.44	23.36
CDY68815	Canola	cytoskeleton, cytosol, nucleus	18.14	23.35
CDX87288	Canola	plastid	27.21	23.35
CDY07893	Canola	cytosol	17.44	23.22
CDY64940	Canola	nucleus	17.67	23.17
CDY27963	Canola	cytosol	17.67	23.1
CDY63310	Canola	endoplasmic reticulum	18.6	23.05
CDX89142	Canola	endoplasmic reticulum	18.6	23.05
CDY63891	Canola	cytosol	25.58	22.63
CDX83026	Canola	cytosol	17.21	22.56
CDY35188	Canola	cytosol	16.98	22.53
CDY13869	Canola	cytosol	17.67	22.49
CDY36915	Canola	cytosol	17.44	22.46
CDY29908	Canola	cytoskeleton, cytosol, nucleus	16.74	22.43
CDX70980	Canola	nucleus	21.16	22.36
CDX92876	Canola	cytoskeleton, cytosol, nucleus	16.51	22.33
CDY22173	Canola	cytosol	17.44	22.32
CDY65077	Canola	cytosol	17.44	22.32
CDX88812	Canola	nucleus	21.16	22.3
CDY65546	Canola	nucleus	21.63	22.09
CDY09117	Canola	nucleus	21.63	21.99
CDX69371	Canola	mitochondrion	25.58	21.96
CDX92385	Canola	nucleus	21.4	21.8
CDX92386	Canola	nucleus	21.4	21.8
CDY38388	Canola	cytosol	16.98	21.34
CDX68447	Canola	cytosol	16.98	21.28
CDY21803	Canola	nucleus	16.28	20.71
CDY24146	Canola	cytosol	17.67	20.16
CDY66166	Canola	plastid	13.72	16.95
CDY14974	Canola	nucleus	12.79	15.9
CDY16617	Canola	nucleus	7.21	14.9
CDY20977	Canola	nucleus	13.26	14.14
CDY20589	Canola	nucleus	12.79	13.99
CDX97927	Canola	nucleus	13.02	12.93
CDY67277	Canola	cytosol, nucleus, plastid	13.02	12.87

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.3.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	GO:A0A078DNQ3	EnsemblPlants:CDX90134
ProteinID:CDX90134	ProteinID:CDX90134.1	InterPro:DnaJ	InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457
GO:GO:0006950	GO:GO:0008150	GO:GO:0009408	GO:GO:0009628	GO:GO:0009987	GO:GO:0031072
GO:GO:0051082	EnsemblPlantsGene:GSBRNA2T00150658001	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305
InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	HAMAP:MF_01152	PFAM:PF00226	PFAM:PF00684
PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PFscan:PS51188	PANTHER:PTHR43096
PANTHER:PTHR43096:SF27	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	SUPFAM:SSF57938	UniParc:UPI0004EE3A0C
SEG:seg	:	:	:	:	:

Description

BnaA08g18500D

Coordinates

chrLK031862:+:246462..251485

Molecular Weight (calculated)

48213.2 Da

IEP (calculated)

9.014

GRAVY (calculated)

-0.483

Length

430 amino acids

Sequence
(BLAST)

001: MRRFNSVLRS LQARRTFDST LGLRPGSQKP FLFERYIHST GISFSSARNY YDVLGVSPKA TRDEIKKSFH ELAKKFHPDT NRNNPSAKKK FQEIREAYET
101: LGNSERREEY DKVRYRNSEY VNNDGSGAER FRRAYQSNFS DSFHKIFSEI FEDQSNPPSP DIRVELTLSL YESLKGCTKR LEFDAYVFCD SCDGLGHSLD
201: AATRVCPTCR GLGRVTIPPF TAQCQTCKGS GHIVKEHCMS CRGSGVVEAT KTVEVVIPGG MESGATVTIE DAGHVRSRTS RPGKLYIKFK VANDSTFSRD
301: GSDIYVDANI SFTQAILGGK VVVPTLSGKT EIDIPKGAQP GELLILRGKG LPKQGFFVDH GDQYVRLRVS VPTELNERQR AILEEFAKEE INSELSGSAE
401: GSWWDRMGPR IIRDFSLVVL LAILLRKLMG

Best Arabidopsis Sequence Match ( AT1G28210.2 )
(BLAST)

001: MRRFNWVLRH VQARRTFDSA IGLRQGSQKP LFERYIHATG INNSSARNYY DVLGVSPKAT REEIKKSFHE LAKKFHPDTN RNNPSAKRKF QEIREAYETL
101: GNSERREEYD KLQYRNSDYV NNDGGDSERF RRAYQSNFSD TFHKIFSEIF ENNQIKPDIR VELSLSLSEA AEGCTKRLSF DAYVFCDSCD GLGHPSDAAM
201: SICPTCRGVG RVTIPPFTAS CQTCKGTGHI IKEYCMSCRG SGIVEGTKTA ELVIPGGVES EATITIVGAG NVSSRTSQPG NLYIKLKVAN DSTFTRDGSD
301: IYVDANISFT QAILGGKVVV PTLSGKIQLD IPKGTQPDQL LVLRGKGLPK QGFFVDHGDQ YVRFRVNFPT EVNERQRAIL EEFAKEEINN ELSDSAEGSW
401: WNLTGPQIIR DFSLMVLLAL LLSRLMG

Arabidopsis Description

ATJ1DNAJ heat shock family protein [Source:UniProtKB/TrEMBL;Acc:F4HWI4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.