Subcellular Localization
min:
: max
Winner_takes_all: cytoskeleton, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024199.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 98.11 | 97.2 |
| CDY29908 | Canola | cytoskeleton, cytosol, nucleus | 97.8 | 96.88 |
| CDY35188 | Canola | cytosol | 89.62 | 87.96 |
| CDY38388 | Canola | cytosol | 89.62 | 83.33 |
| CDX97443 | Canola | cytosol | 77.67 | 82.06 |
| CDY65077 | Canola | cytosol | 83.33 | 78.87 |
| CDY13869 | Canola | cytosol | 83.33 | 78.4 |
| KRH25647 | Soybean | nucleus | 78.93 | 71.92 |
| KRH55895 | Soybean | endoplasmic reticulum, nucleus | 78.62 | 71.02 |
| KRH10937 | Soybean | cytosol | 73.9 | 69.32 |
| Solyc02g077670.2.1 | Tomato | cytosol | 73.27 | 67.93 |
| CDY07893 | Canola | cytosol | 68.87 | 67.8 |
| CDY58657 | Canola | cytosol | 69.18 | 67.48 |
| PGSC0003DMT400081223 | Potato | cytosol | 72.33 | 67.45 |
| CDY64940 | Canola | nucleus | 69.18 | 67.07 |
| CDY68815 | Canola | cytoskeleton, cytosol, nucleus | 70.13 | 66.77 |
| CDY22173 | Canola | cytosol | 70.44 | 66.67 |
| KRH12423 | Soybean | cytoskeleton, cytosol, nucleus | 54.4 | 65.78 |
| CDY27963 | Canola | cytosol | 67.61 | 65.35 |
| KRH21363 | Soybean | cytosol | 62.89 | 64.94 |
| CDY20944 | Canola | cytosol | 56.6 | 59.02 |
| CDY37986 | Canola | cytosol | 43.71 | 58.9 |
| KRH10940 | Soybean | cytosol | 61.95 | 58.63 |
| KRH21362 | Soybean | cytosol | 62.26 | 58.24 |
| CDY20637 | Canola | cytosol | 57.86 | 57.5 |
| CDX88188 | Canola | cytosol | 57.55 | 57.01 |
| CDY54902 | Canola | cytosol | 59.43 | 56.76 |
| CDY05498 | Canola | cytosol | 59.43 | 56.76 |
| CDX80523 | Canola | cytosol | 57.23 | 56.7 |
| CDY30900 | Canola | cytoskeleton, cytosol, nucleus | 59.43 | 56.08 |
| CDY45143 | Canola | cytoskeleton, cytosol, nucleus | 58.18 | 55.89 |
| CDY36915 | Canola | cytosol | 57.86 | 55.09 |
| CDX83026 | Canola | cytosol | 56.29 | 54.57 |
| CDX68447 | Canola | cytosol | 57.86 | 53.64 |
| KRH40259 | Soybean | cytosol | 26.42 | 52.83 |
| CDY21803 | Canola | nucleus | 54.72 | 51.48 |
| CDY24146 | Canola | cytosol | 56.92 | 48.01 |
| CDX67894 | Canola | endoplasmic reticulum, golgi | 33.33 | 32.42 |
| CDY59898 | Canola | endoplasmic reticulum, golgi | 35.22 | 32.28 |
| CDX89142 | Canola | endoplasmic reticulum | 34.91 | 31.99 |
| CDY63310 | Canola | endoplasmic reticulum | 34.91 | 31.99 |
| CDX76646 | Canola | golgi | 34.59 | 31.79 |
| CDY11430 | Canola | golgi | 34.59 | 31.79 |
| CDY65546 | Canola | nucleus | 38.05 | 28.74 |
| CDY66166 | Canola | plastid | 31.45 | 28.74 |
| CDX70980 | Canola | nucleus | 36.48 | 28.5 |
| CDX92385 | Canola | nucleus | 37.74 | 28.44 |
| CDX92386 | Canola | nucleus | 37.74 | 28.44 |
| CDX88812 | Canola | nucleus | 36.48 | 28.43 |
| CDY14974 | Canola | nucleus | 30.82 | 28.32 |
| CDY09117 | Canola | nucleus | 37.11 | 27.9 |
| CDY16617 | Canola | nucleus | 15.72 | 24.04 |
| CDY20589 | Canola | nucleus | 29.25 | 23.66 |
| CDY20977 | Canola | nucleus | 28.93 | 22.83 |
| CDX97927 | Canola | nucleus | 30.82 | 22.63 |
| CDY67277 | Canola | cytosol, nucleus, plastid | 30.5 | 22.3 |
| CDX89453 | Canola | plastid | 30.5 | 21.46 |
| CDY25588 | Canola | plastid | 30.5 | 21.37 |
| CDY45921 | Canola | mitochondrion | 27.67 | 19.69 |
| CDY54516 | Canola | mitochondrion | 27.99 | 19.65 |
| CDX86330 | Canola | mitochondrion | 27.99 | 19.52 |
| CDY35761 | Canola | mitochondrion | 27.36 | 19.46 |
| CDY63891 | Canola | cytosol | 29.25 | 19.14 |
| CDY58774 | Canola | plastid | 29.87 | 19.0 |
| CDX87288 | Canola | plastid | 29.87 | 18.96 |
| CDX69371 | Canola | mitochondrion | 29.25 | 18.56 |
| CDX95817 | Canola | plastid | 28.62 | 18.09 |
| CDX92166 | Canola | plastid | 28.62 | 18.02 |
| CDX90134 | Canola | mitochondrion | 22.33 | 16.51 |
| CDY35719 | Canola | mitochondrion | 21.07 | 13.48 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:19.1.5.2 | Gene3D:2.60.260.20 | GO:A0A078DUB3 | EnsemblPlants:CDX92876 | ProteinID:CDX92876 |
| ProteinID:CDX92876.1 | InterPro:DnaJ_C | InterPro:DnaJ_domain | InterPro:DnaJ_domain_CS | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0006457 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0051082 | EnsemblPlantsGene:GSBRNA2T00154715001 |
| InterPro:HSP40/DnaJ_pept-bd | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | PFAM:PF00226 | PFAM:PF01556 |
| PRINTS:PR00625 | ScanProsite:PS00636 | PFscan:PS50076 | PANTHER:PTHR24078 | PANTHER:PTHR24078:SF298 | SMART:SM00271 |
| SUPFAM:SSF46565 | SUPFAM:SSF49493 | UniParc:UPI0004EEDD0E | SEG:seg | : | : |
Description
BnaC07g41340D
Coordinates
chrLK031873:+:1287923..1289597
Molecular Weight (calculated)
35339.1 Da
IEP (calculated)
9.671
GRAVY (calculated)
-0.651
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVDYYKLLQ VDRSATDDDL KKAYRKLAMK WHPDKNPTNK KDAEAKFKQI SEAYDVLSDP QKRAVYDQYG EEGLKGNVPP PNAASGASYF STGFNPRSAD
101: DIFTEFFGFS TPFGGGGGAG GSMHHHHHHH HHHHQAAARK VAPIENKLPC SLEDLYKGTT KKMKISREIL DASGKATQTE EILTIGVKPG WKKGTKITFP
201: EKGNEHPGVI PADLVFIIDE KPHPVFTREG NDLIVTRKIS LAEALTGYTV NLTTLDGRTL AIPITNVIHP EYEEVVPKEG MPLQKDQTKK GNLRIKFNIK
301: FPARLTTEQK SGFKKLLG
101: DIFTEFFGFS TPFGGGGGAG GSMHHHHHHH HHHHQAAARK VAPIENKLPC SLEDLYKGTT KKMKISREIL DASGKATQTE EILTIGVKPG WKKGTKITFP
201: EKGNEHPGVI PADLVFIIDE KPHPVFTREG NDLIVTRKIS LAEALTGYTV NLTTLDGRTL AIPITNVIHP EYEEVVPKEG MPLQKDQTKK GNLRIKFNIK
301: FPARLTTEQK SGFKKLLG
001: MGVDYYKVLQ VDRSANDDDL KKAYRKLAMK WHPDKNPNNK KDAEAKFKQI SEAYDVLSDP QKRAVYDQYG EEGLKGNVPP PNAATSGASY FSTGDGSSSF
101: RFNPRSADDI FAEFFGFSTP FGGGGGGTGG QRFASRMFGD DMYASFGEGA GGGGAMHHHH HHHHHAAARK VAPIENKLPC SLEDLYKGTT KKMKISREIV
201: DVSGKAMQVE EILTIGVKPG WKKGTKITFP EKGNEHPGVI PADLVFIIDE KPHPVFTREG NDLIVTQKVS LADALTGYTA NIATLDGRTL TIPITNVIHP
301: EYEEVVPKEG MPLQKDQTKK GNLRIKFNIK FPARLTAEQK AGFKKLIG
101: RFNPRSADDI FAEFFGFSTP FGGGGGGTGG QRFASRMFGD DMYASFGEGA GGGGAMHHHH HHHHHAAARK VAPIENKLPC SLEDLYKGTT KKMKISREIV
201: DVSGKAMQVE EILTIGVKPG WKKGTKITFP EKGNEHPGVI PADLVFIIDE KPHPVFTREG NDLIVTQKVS LADALTGYTA NIATLDGRTL TIPITNVIHP
301: EYEEVVPKEG MPLQKDQTKK GNLRIKFNIK FPARLTAEQK AGFKKLIG
Arabidopsis Description
DNAJ heat shock family protein [Source:UniProtKB/TrEMBL;Acc:O49457]
SUBAcon: [cytoskeleton,nucleus,cytosol]
SUBAcon: [cytoskeleton,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.