Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- golgi 1
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400081223 | Potato | cytosol | 97.67 | 98.24 |
| KRH10937 | Soybean | cytosol | 79.3 | 80.24 |
| CDY65077 | Canola | cytosol | 76.09 | 77.68 |
| AT2G20560.1 | Thale cress | cytosol | 76.09 | 77.45 |
| KRH21363 | Soybean | cytosol | 69.39 | 77.27 |
| CDY13869 | Canola | cytosol | 76.09 | 77.22 |
| Bra031127.1-P | Field mustard | cytosol | 75.8 | 76.92 |
| CDY35188 | Canola | cytosol | 71.43 | 75.62 |
| Bra024199.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 69.39 | 74.14 |
| CDY29908 | Canola | cytoskeleton, cytosol, nucleus | 69.1 | 73.83 |
| CDY38388 | Canola | cytosol | 73.18 | 73.39 |
| KRH12423 | Soybean | cytoskeleton, cytosol, nucleus | 56.27 | 73.38 |
| CDX92876 | Canola | cytoskeleton, cytosol, nucleus | 67.93 | 73.27 |
| Bra011031.1-P | Field mustard | cytosol | 74.64 | 72.73 |
| AT4G28480.1 | Thale cress | cytoskeleton, cytosol, nucleus | 73.47 | 72.41 |
| CDX97443 | Canola | cytosol | 62.68 | 71.43 |
| Solyc09g005350.2.1 | Tomato | nucleus, plastid | 69.68 | 70.29 |
| Solyc07g053620.2.1 | Tomato | nucleus | 44.61 | 68.3 |
| Solyc05g006820.2.1 | Tomato | plastid | 52.48 | 57.88 |
| Solyc06g071110.2.1 | Tomato | nucleus | 55.69 | 56.68 |
| Solyc04g005820.2.1 | Tomato | cytosol, nucleus | 52.77 | 56.56 |
| Solyc10g084300.1.1 | Tomato | nucleus | 40.82 | 53.03 |
| Solyc03g007650.1.1 | Tomato | cytosol, mitochondrion, nucleus | 40.23 | 50.55 |
| Solyc01g079610.2.1 | Tomato | nucleus | 35.86 | 35.65 |
| Solyc11g044450.1.1 | Tomato | nucleus | 32.94 | 32.85 |
| Solyc05g055160.2.1 | Tomato | nucleus | 36.44 | 29.83 |
| Solyc04g009770.2.1 | Tomato | nucleus | 35.86 | 29.43 |
| Solyc01g090550.2.1 | Tomato | nucleus | 36.15 | 29.25 |
| Solyc11g071830.1.1 | Tomato | plastid | 35.57 | 29.19 |
| Solyc11g006460.1.1 | Tomato | nucleus | 35.57 | 29.12 |
| Solyc05g050810.2.1 | Tomato | nucleus | 20.7 | 27.63 |
| Solyc01g105340.2.1 | Tomato | plastid | 27.99 | 27.2 |
| Solyc06g060240.1.1 | Tomato | cytosol | 28.28 | 25.26 |
| Solyc05g050820.2.1 | Tomato | cytosol | 14.87 | 21.43 |
| Solyc03g116790.2.1 | Tomato | plastid | 29.15 | 20.08 |
| Solyc01g086740.2.1 | Tomato | mitochondrion | 25.66 | 19.86 |
| Solyc01g081330.2.1 | Tomato | plastid | 23.91 | 18.89 |
| Solyc03g118500.2.1 | Tomato | plastid | 29.15 | 18.8 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:19.1.5.2 | Gene3D:2.60.260.20 | ncoils:Coil | InterPro:DnaJ_C | InterPro:DnaJ_domain |
| InterPro:DnaJ_domain_CS | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006457 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0051082 | InterPro:HSP40/DnaJ_pept-bd | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf |
| UniProt:K4B8Z2 | PFAM:PF00226 | PFAM:PF01556 | PRINTS:PR00625 | ScanProsite:PS00636 | PFscan:PS50076 |
| PANTHER:PTHR24078 | PANTHER:PTHR24078:SF520 | SMART:SM00271 | SUPFAM:SSF46565 | SUPFAM:SSF49493 | EnsemblPlantsGene:Solyc02g077670.2 |
| EnsemblPlants:Solyc02g077670.2.1 | UniParc:UPI0002767D10 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2:-:42559291..42563457
Molecular Weight (calculated)
37744.1 Da
IEP (calculated)
9.684
GRAVY (calculated)
-0.575
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVDYYKILQ VDKSATDDEL KKAYRKLAMK WHPDKNPNNK KEAEAKFKQI SEAYEVLSDS QKRAIYDQYG EEGLKGQVPP PDAAAGGPGG ATYFHTGDGP
101: NVFRFNPRNA NDIFAEFFGF QTPFGGGGMG GGGGGGMRGA RFSSSMFGDD IFSSFGEGRP TIRKAPPIER TVPCSLEELY SGTTKKMKIS REIADASGKT
201: LPVEEILTII IKPGWKKGTK ITFTEKGNEE PNVLPADLVF TIDQKPHSVF TRDGNDLVIN QNISLVEALT GYTAHVTTLD GRKLTIPINK VIHPNYEEIV
301: PKEGMPLPKD PSKRGNLRIK FNIKFPTRLT ADQKTGIKRL LPS
101: NVFRFNPRNA NDIFAEFFGF QTPFGGGGMG GGGGGGMRGA RFSSSMFGDD IFSSFGEGRP TIRKAPPIER TVPCSLEELY SGTTKKMKIS REIADASGKT
201: LPVEEILTII IKPGWKKGTK ITFTEKGNEE PNVLPADLVF TIDQKPHSVF TRDGNDLVIN QNISLVEALT GYTAHVTTLD GRKLTIPINK VIHPNYEEIV
301: PKEGMPLPKD PSKRGNLRIK FNIKFPTRLT ADQKTGIKRL LPS
001: MGVDYYKVLQ VDRSASDDDL KKAYRKLAMK WHPDKNPNNK KDAEAMFKQI SEAYEVLSDP QKKAVYDQYG EEGLKGNVPP PDAGGATYFS TGDGPTSFRF
101: NPRNADDIFA EFFGFSSPFG GGRGGTRFSS SMFGDNMFAS FGEGGGGGGG SMHHGGARKA APIENKLPCS LEDLYKGTTK KMRISREIAD VSGKTMQVEE
201: ILTIDVKPGW KKGTKITFPE KGNEQPGVIP ADLVFIIDEK PHPVFTREGN DLIVTQKISL VEALTGYTVN LTTLDGRRLT IPVTNVVHPE YEEVVPKEGM
301: PLQKDQTKRG NLRIKFNIKF PTRLTSEQKT GVKKLLG
101: NPRNADDIFA EFFGFSSPFG GGRGGTRFSS SMFGDNMFAS FGEGGGGGGG SMHHGGARKA APIENKLPCS LEDLYKGTTK KMRISREIAD VSGKTMQVEE
201: ILTIDVKPGW KKGTKITFPE KGNEQPGVIP ADLVFIIDEK PHPVFTREGN DLIVTQKISL VEALTGYTVN LTTLDGRRLT IPVTNVVHPE YEEVVPKEGM
301: PLQKDQTKRG NLRIKFNIKF PTRLTSEQKT GVKKLLG
Arabidopsis Description
At2g20560/T13C7.15 [Source:UniProtKB/TrEMBL;Acc:Q9SIL3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.