Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU0Hr1G016360.1 | Barley | cytosol | 46.64 | 62.71 |
| Solyc01g090550.2.1 | Tomato | nucleus | 68.91 | 38.68 |
| Os02t0656500-01 | Rice | nucleus | 63.87 | 36.19 |
| Zm00001d017476_P001 | Maize | plasma membrane | 63.87 | 36.02 |
| EES07516 | Sorghum | nucleus | 63.45 | 35.95 |
| Solyc04g009770.2.1 | Tomato | nucleus | 61.76 | 35.17 |
| Solyc11g006460.1.1 | Tomato | nucleus | 61.76 | 35.08 |
| TraesCS6D01G232600.1 | Wheat | nucleus | 62.6 | 35.06 |
| TraesCS6B01G274600.1 | Wheat | nucleus | 62.6 | 35.06 |
| TraesCS6A01G250800.1 | Wheat | nucleus | 62.6 | 35.06 |
| Solyc05g055160.2.1 | Tomato | nucleus | 61.34 | 34.84 |
| Os04t0549600-01 | Rice | cytosol | 60.5 | 34.62 |
| OQU82085 | Sorghum | nucleus | 60.5 | 34.45 |
| Solyc11g071830.1.1 | Tomato | plastid | 60.5 | 34.45 |
| GSMUA_Achr8P11020_001 | Banana | nucleus | 55.88 | 33.25 |
| GSMUA_Achr11P... | Banana | cytosol | 52.1 | 32.55 |
| HORVU0Hr1G018300.1 | Barley | plastid | 63.45 | 31.2 |
| Solyc10g084300.1.1 | Tomato | nucleus | 19.75 | 17.8 |
| Solyc05g006820.2.1 | Tomato | plastid | 22.69 | 17.36 |
| Solyc04g005820.2.1 | Tomato | cytosol, nucleus | 22.69 | 16.88 |
| Solyc03g007650.1.1 | Tomato | cytosol, mitochondrion, nucleus | 19.33 | 16.85 |
| Solyc02g077670.2.1 | Tomato | cytosol | 21.43 | 14.87 |
| Solyc01g079610.2.1 | Tomato | nucleus | 21.01 | 14.49 |
| Solyc06g071110.2.1 | Tomato | nucleus | 19.33 | 13.65 |
| Solyc09g005350.2.1 | Tomato | nucleus, plastid | 19.33 | 13.53 |
| Solyc11g044450.1.1 | Tomato | nucleus | 16.81 | 11.63 |
| Solyc06g060240.1.1 | Tomato | cytosol | 18.07 | 11.2 |
| Solyc01g105340.2.1 | Tomato | plastid | 13.87 | 9.35 |
| Solyc01g081330.2.1 | Tomato | plastid | 15.97 | 8.76 |
| Solyc03g118500.2.1 | Tomato | plastid | 19.33 | 8.65 |
| Solyc01g086740.2.1 | Tomato | mitochondrion | 15.97 | 8.58 |
| Solyc03g116790.2.1 | Tomato | plastid | 16.39 | 7.83 |
| Solyc07g053620.2.1 | Tomato | nucleus | 2.94 | 3.12 |
| Solyc05g050810.2.1 | Tomato | nucleus | 2.1 | 1.95 |
Protein Annotations
| EnsemblPlants:Solyc05g050820.2.1 | EnsemblPlantsGene:Solyc05g050820.2 | Gene3D:2.60.260.20 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006457 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0051082 | InterPro:DnaJ_C | InterPro:HSP40/DnaJ_pept-bd |
| PANTHER:PTHR43888 | PANTHER:PTHR43888:SF11 | PFAM:PF01556 | SUPFAM:SSF49493 | UniParc:UPI0002767238 | UniProt:K4C1B4 |
| MapMan:19.1.5.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5:+:60998175..60999403
Molecular Weight (calculated)
27223.4 Da
IEP (calculated)
6.238
GRAVY (calculated)
-0.608
Length
238 amino acids
Sequence
(BLAST)
(BLAST)
001: MFVTSAKAQL MRFPGEVITE LDRCPQCNGN KITQEKKVLN VNVEKGMLHG QKIVFNAEAD EAPDTITGNV IFVLQQKSHS KFRRNSDDLY MEHNISLTEA
101: LCGFQFVLTH LDGRQLQIKS SPGEVIKPDQ YKAINDEGMP RYGRPFIKGQ LYIHFNVIFP ESGFLSLDKC RALEAILPTR LGKRSSGIEL EKCEETTMHD
201: VNIDEEMRRN EQRHHRQEAY DTDDEINANL HSLGCNQQ
101: LCGFQFVLTH LDGRQLQIKS SPGEVIKPDQ YKAINDEGMP RYGRPFIKGQ LYIHFNVIFP ESGFLSLDKC RALEAILPTR LGKRSSGIEL EKCEETTMHD
201: VNIDEEMRRN EQRHHRQEAY DTDDEINANL HSLGCNQQ
001: MFGRGPSKKS DNTKFYEILG VPKSASPEDL KKAYKKAAIK NHPDKGGDPE KFKELAQAYE VLSDPEKREI YDQYGEDALK EGMGGGGGGH DPFDIFSSFF
101: GGGPFGGNTS RQRRQRRGED VVHPLKVSLE DVYLGTMKKL SLSRNALCSK CNGKGSKSGA SLKCGGCQGS GMKVSIRQLG PGMIQQMQHA CNECKGTGET
201: INDRDRCPQC KGDKVIPEKK VLEVNVEKGM QHSQKITFEG QADEAPDTVT GDIVFVLQQK EHPKFKRKGE DLFVEHTLSL TEALCGFQFV LTHLDGRSLL
301: IKSNPGEVVK PDSYKAISDE GMPIYQRPFM KGKLYIHFTV EFPDSLSPDQ TKALEAVLPK PSTAQLSDME IDECEETTLH DVNIEDEMRR KAQAQREAYD
401: DDDEDDDHPG GAQRVQCAQQ
101: GGGPFGGNTS RQRRQRRGED VVHPLKVSLE DVYLGTMKKL SLSRNALCSK CNGKGSKSGA SLKCGGCQGS GMKVSIRQLG PGMIQQMQHA CNECKGTGET
201: INDRDRCPQC KGDKVIPEKK VLEVNVEKGM QHSQKITFEG QADEAPDTVT GDIVFVLQQK EHPKFKRKGE DLFVEHTLSL TEALCGFQFV LTHLDGRSLL
301: IKSNPGEVVK PDSYKAISDE GMPIYQRPFM KGKLYIHFTV EFPDSLSPDQ TKALEAVLPK PSTAQLSDME IDECEETTLH DVNIEDEMRR KAQAQREAYD
401: DDDEDDDHPG GAQRVQCAQQ
Arabidopsis Description
ATJ3DnaJ protein homolog atj3 [Source:UniProtKB/TrEMBL;Acc:Q0WW92]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.