Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27341663
|
msms PMID:
27341663
doi
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES07516 | Sorghum | nucleus | 96.21 | 96.67 |
| Os02t0656500-01 | Rice | nucleus | 88.86 | 89.29 |
| TraesCS6A01G250800.1 | Wheat | nucleus | 85.78 | 85.18 |
| TraesCS6B01G274600.1 | Wheat | nucleus | 85.78 | 85.18 |
| TraesCS6D01G232600.1 | Wheat | nucleus | 85.78 | 85.18 |
| HORVU0Hr1G016360.1 | Barley | cytosol | 34.36 | 81.92 |
| GSMUA_Achr11P... | Banana | cytosol | 72.75 | 80.58 |
| GSMUA_Achr8P11020_001 | Banana | nucleus | 75.59 | 79.75 |
| HORVU0Hr1G018300.1 | Barley | plastid | 87.44 | 76.24 |
| KRH66593 | Soybean | endoplasmic reticulum | 75.12 | 75.48 |
| Zm00001d034368_P001 | Maize | extracellular, plasma membrane | 73.93 | 74.64 |
| PGSC0003DMT400066980 | Potato | nucleus | 74.17 | 74.52 |
| KRH48754 | Soybean | endoplasmic reticulum | 73.93 | 74.29 |
| Zm00001d033210_P002 | Maize | nucleus | 73.46 | 73.99 |
| Solyc01g090550.2.1 | Tomato | nucleus | 74.17 | 73.82 |
| Zm00001d013111_P001 | Maize | extracellular, plasma membrane | 72.75 | 73.62 |
| PGSC0003DMT400018083 | Potato | nucleus | 71.56 | 72.08 |
| VIT_15s0021g02090.t01 | Wine grape | cytosol | 75.36 | 71.78 |
| Zm00001d013669_P002 | Maize | cytosol | 73.22 | 68.82 |
| Zm00001d048538_P001 | Maize | nucleus | 52.61 | 68.31 |
| Zm00001d006666_P001 | Maize | nucleus | 45.5 | 65.53 |
| Zm00001d031357_P001 | Maize | cytosol, nucleus, plastid | 28.2 | 64.67 |
| Zm00001d006230_P001 | Maize | cytosol | 44.08 | 64.14 |
| Solyc05g050820.2.1 | Tomato | cytosol | 36.02 | 63.87 |
| Zm00001d045645_P001 | Maize | cytosol | 39.57 | 62.78 |
| Zm00001d006563_P001 | Maize | mitochondrion | 38.86 | 60.29 |
| Zm00001d026185_P001 | Maize | endoplasmic reticulum | 66.82 | 56.06 |
| Zm00001d004840_P001 | Maize | mitochondrion | 44.31 | 54.52 |
| Solyc05g050810.2.1 | Tomato | nucleus | 31.52 | 51.75 |
| Zm00001d009027_P001 | Maize | cytosol | 29.15 | 36.61 |
| Zm00001d009556_P001 | Maize | cytoskeleton, cytosol, nucleus | 28.91 | 34.76 |
| Zm00001d009783_P004 | Maize | mitochondrion | 28.67 | 34.57 |
| Zm00001d010958_P001 | Maize | cytosol | 26.3 | 34.05 |
| Zm00001d039000_P001 | Maize | mitochondrion | 28.91 | 33.7 |
| Zm00001d016440_P001 | Maize | cytosol | 26.78 | 32.66 |
| Zm00001d037586_P001 | Maize | endoplasmic reticulum | 28.2 | 32.43 |
| Zm00001d024527_P001 | Maize | cytosol | 25.83 | 31.32 |
| Zm00001d032347_P001 | Maize | cytosol | 24.41 | 30.21 |
| Zm00001d039259_P001 | Maize | nucleus | 28.2 | 27.61 |
| Zm00001d012242_P001 | Maize | cytosol | 20.38 | 27.22 |
| Zm00001d053972_P001 | Maize | cytosol, golgi, plasma membrane | 25.59 | 25.47 |
| Zm00001d035975_P001 | Maize | mitochondrion | 25.83 | 25.41 |
| Zm00001d035974_P001 | Maize | mitochondrion | 25.83 | 25.41 |
| Zm00001d009210_P001 | Maize | endoplasmic reticulum | 24.41 | 25.37 |
| Zm00001d038250_P001 | Maize | cytosol | 18.72 | 23.58 |
| Zm00001d023537_P002 | Maize | mitochondrion | 22.75 | 22.59 |
| Zm00001d024635_P001 | Maize | mitochondrion | 26.3 | 22.52 |
| Zm00001d049583_P003 | Maize | cytosol, mitochondrion, nucleus, plastid | 26.3 | 22.42 |
| Zm00001d042653_P001 | Maize | plastid | 20.14 | 21.25 |
| Zm00001d018413_P003 | Maize | mitochondrion | 27.96 | 20.74 |
| Zm00001d047195_P001 | Maize | mitochondrion | 16.11 | 20.61 |
| Zm00001d052001_P002 | Maize | plastid | 27.49 | 18.89 |
| Zm00001d028256_P002 | Maize | plastid | 23.22 | 18.22 |
| Zm00001d044878_P002 | Maize | mitochondrion | 19.67 | 16.94 |
Protein Annotations
| Gene3D:1.10.287.110 | EntrezGene:100216704 | MapMan:19.1.5.2 | Gene3D:2.10.230.10 | Gene3D:2.60.260.20 | ProteinID:AQK73236.1 |
| UniProt:B4FJC3 | EMBL:BT037211 | ncoils:Coil | InterPro:DnaJ | InterPro:DnaJ_C | InterPro:DnaJ_domain |
| InterPro:DnaJ_domain_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 |
| GO:GO:0006457 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009408 | GO:GO:0009628 | GO:GO:0009987 |
| GO:GO:0031072 | GO:GO:0046872 | GO:GO:0051082 | InterPro:HSP40/DnaJ_pept-bd | InterPro:HSP_DnaJ_Cys-rich_dom | InterPro:HSP_DnaJ_Cys-rich_dom_sf |
| InterPro:IPR001305 | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | HAMAP:MF_01152 | PFAM:PF00226 |
| PFAM:PF00684 | PFAM:PF01556 | PRINTS:PR00625 | ScanProsite:PS00636 | PFscan:PS50076 | PFscan:PS51188 |
| PANTHER:PTHR43888 | PANTHER:PTHR43888:SF1 | SMART:SM00271 | SUPFAM:SSF46565 | SUPFAM:SSF49493 | SUPFAM:SSF57938 |
| UniParc:UPI0000E654D0 | EnsemblPlantsGene:Zm00001d017476 | EnsemblPlants:Zm00001d017476_P001 | EnsemblPlants:Zm00001d017476_T001 | SEG:seg | : |
Description
Chaperone protein dnaJ 3
Coordinates
chr5:+:197139091..197145688
Molecular Weight (calculated)
47077.9 Da
IEP (calculated)
7.092
GRAVY (calculated)
-0.783
Length
422 amino acids
Sequence
(BLAST)
(BLAST)
001: MFGRMPRKSS NNTKYYEVLG VSKTASQDEL KKAYRKAAIK NHPDKGGDPE KFKELSQAYD VLSDPEKREI YDQYGEDALK EGMGGGSSSD FHSPFDIFEQ
101: LFPGSSTFGG GSSRGRRQKR GEDVVHTMKV SLDDLYNGTT KKLSLSRSAL CSKCKGKGSK SGASGTCHGC RGAGMRTITR QIGLGMIQQM NTVCPECKGS
201: GEIISDKDKC PSCKGNKVVQ EKKVLEVHVE KGMQHNQKIV FQGQADEAPD TVTGDIVFVL QLKDHPKFKR MYDDLYVEHT ISLTEALCGF QFVLTHLDGR
301: QLLIKSDPGE VIKPGQHKAI NDEGMPQHGR PFMKGRLFVE FNVVFPEPGA LSPAQCRSLE KILPPKPGSQ LSDMELDQCE ETTLHDVNIE EEMRRRQQQK
401: KQEAYDEDEE EDAQPRVQCA QQ
101: LFPGSSTFGG GSSRGRRQKR GEDVVHTMKV SLDDLYNGTT KKLSLSRSAL CSKCKGKGSK SGASGTCHGC RGAGMRTITR QIGLGMIQQM NTVCPECKGS
201: GEIISDKDKC PSCKGNKVVQ EKKVLEVHVE KGMQHNQKIV FQGQADEAPD TVTGDIVFVL QLKDHPKFKR MYDDLYVEHT ISLTEALCGF QFVLTHLDGR
301: QLLIKSDPGE VIKPGQHKAI NDEGMPQHGR PFMKGRLFVE FNVVFPEPGA LSPAQCRSLE KILPPKPGSQ LSDMELDQCE ETTLHDVNIE EEMRRRQQQK
401: KQEAYDEDEE EDAQPRVQCA QQ
001: MAALASPSLI PSSLCFAAAA DGPRSLSSNF SAFSDGGSNF RYHKSFLSLS SSSSSSTPYR NRRGRSLVVF ATSGDYYATL GVSKSANNKE IKAAYRRLAR
101: QYHPDVNKEP GATEKFKEIS AAYEVLSDEQ KRALYDQYGE AGVKSTVGGA SGPYTSNPFD LFETFFGASM GGFPGMDQAD FGRTRRSRVT KGEDLRYDIT
201: LELSEAIFGS EKEFDLTHLE TCEACAGTGA KAGSKMRICS TCGGRGQVMR TEQTPFGMFS QVSICPNCGG DGEVISENCR KCSGEGRVRI KKSIKVKIPP
301: GVSAGSILRV AGEGDSGPRG GPPGDLYVYL DVEDVRGIER DGINLLSTLS ISYLDAILGA VVKVKTVEGD TELQIPPGTQ PGDVLVLAKK GVPKLNRPSI
401: RGDHLFTVKV SVPNQISAGE RELLEELASL KDTSSNRSRT RAKPQQPSTL STAPSGSENK KDEVKEENEE PEQENYLWNN IKEFAGSVAN GALKWLRDNL
101: QYHPDVNKEP GATEKFKEIS AAYEVLSDEQ KRALYDQYGE AGVKSTVGGA SGPYTSNPFD LFETFFGASM GGFPGMDQAD FGRTRRSRVT KGEDLRYDIT
201: LELSEAIFGS EKEFDLTHLE TCEACAGTGA KAGSKMRICS TCGGRGQVMR TEQTPFGMFS QVSICPNCGG DGEVISENCR KCSGEGRVRI KKSIKVKIPP
301: GVSAGSILRV AGEGDSGPRG GPPGDLYVYL DVEDVRGIER DGINLLSTLS ISYLDAILGA VVKVKTVEGD TELQIPPGTQ PGDVLVLAKK GVPKLNRPSI
401: RGDHLFTVKV SVPNQISAGE RELLEELASL KDTSSNRSRT RAKPQQPSTL STAPSGSENK KDEVKEENEE PEQENYLWNN IKEFAGSVAN GALKWLRDNL
Arabidopsis Description
Molecular chaperone Hsp40/DnaJ family protein [Source:UniProtKB/TrEMBL;Acc:Q0WN54]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.