Factsheet for Zm00001d052001_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG31305	Sorghum	plastid	75.24	92.96
Os02t0804500-01	Rice	plastid	66.45	83.78
Zm00001d018413_P003	Maize	mitochondrion	75.08	81.02
TraesCS6D01G356800.1	Wheat	plastid	63.03	79.63
TraesCS6A01G372700.1	Wheat	plastid	63.19	79.51
TraesCS6B01G410600.1	Wheat	plastid	63.68	79.31
HORVU0Hr1G017450.8	Barley	cytosol	55.86	70.87
GSMUA_Achr11P...	Banana	plastid	54.07	67.76
VIT_09s0002g07210.t01	Wine grape	plastid	51.95	65.24
Solyc03g116790.2.1	Tomato	plastid	51.14	63.05
KRH09715	Soybean	nucleus, plastid	49.51	61.66
AT1G80030.2	Thale cress	plastid	49.35	60.6
CDY58774	Canola	plastid	48.37	59.4
CDX87288	Canola	plastid	47.88	58.68
Bra035201.1-P	Field mustard	plastid	47.88	58.68
KRH44477	Soybean	plastid	41.86	57.88
KRH23590	Soybean	nucleus	33.06	56.86
Zm00001d024635_P001	Maize	mitochondrion	34.2	42.6
Zm00001d049583_P003	Maize	cytosol, mitochondrion, nucleus, plastid	34.2	42.42
Zm00001d047195_P001	Maize	mitochondrion	22.64	42.12
Zm00001d028256_P002	Maize	plastid	29.15	33.27
Zm00001d035974_P001	Maize	mitochondrion	21.99	31.47
Zm00001d035975_P001	Maize	mitochondrion	21.82	31.24
Zm00001d023537_P002	Maize	mitochondrion	20.85	30.12
Zm00001d039000_P001	Maize	mitochondrion	17.59	29.83
Zm00001d009027_P001	Maize	cytosol	16.29	29.76
Zm00001d009556_P001	Maize	cytoskeleton, cytosol, nucleus	16.94	29.63
Zm00001d009783_P004	Maize	mitochondrion	16.29	28.57
Zm00001d034368_P001	Maize	extracellular, plasma membrane	19.22	28.23
Zm00001d033210_P002	Maize	nucleus	19.22	28.16
Zm00001d024527_P001	Maize	cytosol	15.96	28.16
Zm00001d016440_P001	Maize	cytosol	15.8	28.03
Zm00001d013111_P001	Maize	extracellular, plasma membrane	18.89	27.82
Zm00001d010958_P001	Maize	cytosol	14.66	27.61
Zm00001d017476_P001	Maize	plasma membrane	18.89	27.49
Zm00001d037586_P001	Maize	endoplasmic reticulum	16.29	27.25
Zm00001d032347_P001	Maize	cytosol	14.98	26.98
Zm00001d013669_P002	Maize	cytosol	18.89	25.84
Zm00001d039259_P001	Maize	nucleus	16.94	24.13
Zm00001d009210_P001	Maize	endoplasmic reticulum	15.47	23.4
Zm00001d031357_P001	Maize	cytosol, nucleus, plastid	7.0	23.37
Zm00001d048538_P001	Maize	nucleus	12.21	23.08
Zm00001d006666_P001	Maize	nucleus	10.59	22.18
Zm00001d026185_P001	Maize	endoplasmic reticulum	18.08	22.07
Zm00001d053972_P001	Maize	cytosol, golgi, plasma membrane	14.5	20.99
Zm00001d038250_P001	Maize	cytosol	11.4	20.9
Zm00001d044878_P002	Maize	mitochondrion	16.45	20.61
Zm00001d006563_P001	Maize	mitochondrion	9.12	20.59
Zm00001d012242_P001	Maize	cytosol	10.59	20.57
Zm00001d004840_P001	Maize	mitochondrion	11.07	19.83
Zm00001d006230_P001	Maize	cytosol	8.96	18.97
Zm00001d045645_P001	Maize	cytosol	7.65	17.67
Zm00001d042653_P001	Maize	plastid	11.24	17.25

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.4.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	UniProt:A0A1D6QBV5	ProteinID:AQK55727.1
InterPro:DnaJ	InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150
GO:GO:0009408	GO:GO:0009628	GO:GO:0009987	GO:GO:0031072	GO:GO:0046872	GO:GO:0051082
InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305	InterPro:IPR001623	InterPro:IPR036869
InterPro:J_dom_sf	HAMAP:MF_01152	PFAM:PF00226	PFAM:PF00684	PFAM:PF01556	PRINTS:PR00625
ScanProsite:PS00636	PFscan:PS50076	PFscan:PS51188	PANTHER:PTHR43096	PANTHER:PTHR43096:SF22	SMART:SM00271
SUPFAM:SSF46565	SUPFAM:SSF49493	SUPFAM:SSF57938	UniParc:UPI0008458959	EnsemblPlantsGene:Zm00001d052001	EnsemblPlants:Zm00001d052001_P002
EnsemblPlants:Zm00001d052001_T002	SEG:seg	:	:	:	:

Description

Chaperone protein dnaJ

Coordinates

chr4:+:176245559..176257814

Molecular Weight (calculated)

66489.7 Da

IEP (calculated)

10.045

GRAVY (calculated)

-0.314

Length

614 amino acids

Sequence
(BLAST)

001: MTGGPTLFHP PCDHVFSAPS LKLPSAHGHG LMALTSFPFA PSNTSLSYSS RASTAAAFAP RGVHFAAPGR SGGGQPLACA APRCRGRAPR RRRGGGLLVW
101: AAADYYATLG VPRAASNKDI KAAYRKLARQ VLDACLTSNP TIPRLTARQP CIVGLIGWPA VRSRVRASLA SRIRRIRAYR WMQKNSSKMN YFASTRAAHV
201: WHIQICFFWK INHDIFFCLQ YHPDVNKEPG ATEKFKEISA AYEVLSDEKK RTLYDQYGEA GVKSAVGGSG GAYTTNPFDL FETFFGGSMG GFSGMDQSTF
301: RTSRQNTVLQ GEDIRYDVVL GFTEAIFGTE KYIILSHLET CDTCGGSGSK AGSKMRICST CGGRGQVMRT EQTPFGLFSQ VSICPTCAGE GEVISEYCRK
401: CSGEGRIRVR KEIKVKIPPG VSKGSTLRVR GEGDAGSKGG PPGDLFVCLD IEEPSDIKRD GINLYSTVSI SYLEAILGTI KKVRTVDGTN DLRIPPGTQP
501: GDVIALAKQG VPSLNKPTIR GDHLFTVKVA IPKRISGRER ELLEELASLS NGGFVRTDAK PKPAQPKRVH LEKEVGASQE DTDKSKAAGD WLKKLTHFAG
601: SIANGAAKWL KENL

Best Arabidopsis Sequence Match ( AT1G80030.1 )
(BLAST)

001: MAALASPSLI PSSLCFAAAA DGPRSLSSNF SAFSDGGSNF RYHKSFLSLS SSSSSSTPYR NRRGRSLVVF ATSGDYYATL GVSKSANNKE IKAAYRRLAR
101: QYHPDVNKEP GATEKFKEIS AAYEVLSDEQ KRALYDQYGE AGVKSTVGGA SGPYTSNPFD LFETFFGASM GGFPGMDQAD FGRTRRSRVT KGEDLRYDIT
201: LELSEAIFGS EKEFDLTHLE TCEACAGTGA KAGSKMRICS TCGGRGQVMR TEQTPFGMFS QVSICPNCGG DGEVISENCR KCSGEGRVRI KKSIKVKIPP
301: GVSAGSILRV AGEGDSGPRG GPPGDLYVYL DVEDVRGIER DGINLLSTLS ISYLDAILGA VVKVKTVEGD TELQIPPGTQ PGDVLVLAKK GVPKLNRPSI
401: RGDHLFTVKV SVPNQISAGE RELLEELASL KDTSSNRSRT RAKPQQPSTL STAPSGSENK KDEVKEENEE PEQENYLWNN IKEFAGSVAN GALKWLRDNL

Arabidopsis Description

Molecular chaperone Hsp40/DnaJ family protein [Source:UniProtKB/TrEMBL;Acc:Q0WN54]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.