CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH09715	Soybean	nucleus, plastid	71.85	64.71
VIT_09s0002g07210.t01	Wine grape	plastid	69.37	62.99
KRH23590	Soybean	nucleus	49.77	61.9
Solyc03g116790.2.1	Tomato	plastid	66.22	59.04
CDX87288	Canola	plastid	65.32	57.88
Bra035201.1-P	Field mustard	plastid	65.32	57.88
CDY58774	Canola	plastid	65.09	57.8
AT1G80030.2	Thale cress	plastid	65.09	57.8
GSMUA_Achr11P...	Banana	plastid	61.71	55.92
KXG31305	Sorghum	plastid	59.23	52.92
TraesCS6A01G372700.1	Wheat	plastid	57.88	52.66
TraesCS6D01G356800.1	Wheat	plastid	57.43	52.47
Os02t0804500-01	Rice	plastid	57.43	52.36
TraesCS6B01G410600.1	Wheat	plastid	57.66	51.93
HORVU0Hr1G017450.8	Barley	cytosol	55.86	51.24
Zm00001d018413_P003	Maize	mitochondrion	59.01	46.05
Zm00001d052001_P002	Maize	plastid	57.88	41.86
KRH59311	Soybean	plastid	39.41	40.42
KRH31310	Soybean	nucleus, plastid	39.86	40.23
KRG97564	Soybean	plastid	39.64	40.0
KRH43163	Soybean	plastid	38.51	39.13
KRH61858	Soybean	cytosol	12.39	38.73
KRH48662	Soybean	nucleus, plastid	38.96	32.95
KRH52529	Soybean	cytosol	20.72	28.22
KRH69388	Soybean	cytosol	17.34	27.9
KRH74747	Soybean	cytosol	17.34	27.8
KRH00241	Soybean	cytosol, nucleus	20.95	27.43
KRH10937	Soybean	cytosol	20.95	27.43
KRH48754	Soybean	endoplasmic reticulum	25.68	27.14
KRH68242	Soybean	endoplasmic reticulum	20.95	27.11
KRH25647	Soybean	nucleus	21.17	26.93
KRH66593	Soybean	endoplasmic reticulum	25.45	26.9
KRG96505	Soybean	nucleus	20.5	26.53
KRH49388	Soybean	cytosol	20.5	26.3
KRH55895	Soybean	endoplasmic reticulum, nucleus	20.72	26.14
KRH65726	Soybean	nucleus	19.82	26.11
KRG88624	Soybean	nucleus	19.82	26.11
KRG99186	Soybean	cytosol	16.89	25.95
KRH61857	Soybean	cytosol, nucleus	6.76	25.86
KRH45833	Soybean	cytosol	16.67	25.61
KRH75968	Soybean	nucleus	19.37	25.52
KRH69236	Soybean	endoplasmic reticulum	19.59	25.14
KRH43470	Soybean	mitochondrion	25.0	25.0
KRH21362	Soybean	cytosol	19.14	25.0
KRH10940	Soybean	cytosol	18.92	25.0
KRH16800	Soybean	mitochondrion	26.35	24.95
KRH25334	Soybean	nucleus	23.42	24.94
KRH36456	Soybean	mitochondrion	24.77	24.83
KRH13903	Soybean	mitochondrion	24.77	24.77
KRH72418	Soybean	mitochondrion	26.13	24.73
KRG88903	Soybean	nucleus	23.2	24.7
KRH21363	Soybean	cytosol	17.12	24.68
KRH27511	Soybean	mitochondrion	24.55	24.61
KRH26709	Soybean	nucleus	22.97	24.46
KRH22611	Soybean	nucleus	22.97	24.46
KRH63417	Soybean	nucleus	11.04	24.14
KRH54495	Soybean	nucleus	18.69	23.65
KRH63415	Soybean	cytosol	7.43	22.45
KRH12423	Soybean	cytoskeleton, cytosol, nucleus	12.61	21.29
KRH60063	Soybean	endoplasmic reticulum, golgi	8.78	19.7
KRH40259	Soybean	cytosol	6.98	19.5
KRH55068	Soybean	cytosol	5.18	16.79
KRH10414	Soybean	cytosol	12.16	14.17
KRH44054	Soybean	cytosol	12.16	14.06
KRG90292	Soybean	cytosol, nucleus, plastid	8.33	12.94
KRH64663	Soybean	plastid	8.78	11.02

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.4.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	UniProt:A0A0R0IQC6	EMBL:ACUP02004928
InterPro:DnaJ	InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	EnsemblPlantsGene:GLYMA_08G213400	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0006950
GO:GO:0008150	GO:GO:0009408	GO:GO:0009628	GO:GO:0009987	GO:GO:0031072	GO:GO:0046872
GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	EnsemblPlants:KRH44477	ProteinID:KRH44477	ProteinID:KRH44477.1	HAMAP:MF_01152
PFAM:PF00226	PFAM:PF00684	PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076
PFscan:PS51188	PANTHER:PTHR43096	PANTHER:PTHR43096:SF22	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493
SUPFAM:SSF57938	UniParc:UPI0006EDE4DC	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:17224394..17229547

Molecular Weight (calculated)

48281.4 Da

IEP (calculated)

8.119

GRAVY (calculated)

-0.297

Length

444 amino acids

Sequence
(BLAST)

001: MAILSLQFHA LPFPLPTSSS SSYFDAIHLR SNNKNLVFIA YPLFSISSSS SRRRFATLVA SASGDYYGTL GVSKSASARE IKASYRRLAR QYHPDVNKEP
101: GATEKFKQIS TAYEVLSDDK KRAMYDQYGE AGVKSTVGGA SAAYTTNPLD LFETFFGSRM GGFSGMDPTE FGTWEQCTTV TKGQDIREFE LFDMEICEVC
201: SGTGAKIGSK MRICSTCGGR GQVMRTEQTP FGLFSLLISV SVCPNCGGDD EVISEYCTNC RGEEQIQIKK NIKVKVPPGV SSGSILRVAG EGDAGPRWGP
301: SGDLYVYLDV EEISGIQRDG INLRSTISIS YLDAILGAVV KVKTVKGISE LQIPPARKGA PKLNKPSIRG DHLFTVKVTI PKRISTMERE LLEEVSLLRN
401: STSKRSTEGP ATQNVESTVA TVAEPTAQPE DQNDAWKKLK DIAG

Best Arabidopsis Sequence Match ( AT1G80030.4 )
(BLAST)

001: MAALASPSLI PSSLCFAAAA DGPRSLSSNF SAFSDGGSNF RYHKSFLSLS SSSSSSTPYR NRRGRSLVVF ATSGDYYATL GVSKSANNKE IKAAYRRLAR
101: QYHPDVNKEP GATEKFKEIS AAYEVLSDEQ KRALYDQYGE AGVKSTVGGA SGPYTSNPFD LFETFFGASM GGFPGMDQAD FGRTRRSRVT KGEDLRYDIT
201: LELSEAIFGS EKEFDLTHLE TCEACAGTGA KAGSKMRICS TCGGRGQVMR TEQTPFGMFS QVSICPNCGG DGEVISENCR KCSGEGRVRI KKSIKVKIPP
301: GVSAGSILRV AGEGDSGPRG GPPGDLYVYL DVEDVRGIER DGINLLSTLS ISYLDAILGA VVKVKTVEGD TELQIPPGTQ PGDVLVLAKK GVPKLNRPSI
401: RGDHLFTVKV SVPNQISAGE RELLEELASL KDTSSNRSRT RAKPQQPSTL STAPSGSENK KDEVKEENEE PEQENYLWNN IKEFAG

Arabidopsis Description

Molecular chaperone Hsp40/DnaJ family protein [Source:UniProtKB/TrEMBL;Acc:Q0WN54]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.