CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
nucleus 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH36456	Soybean	mitochondrion	94.81	94.81
KRH13903	Soybean	mitochondrion	82.84	82.66
KRH43470	Soybean	mitochondrion	82.39	82.21
VIT_13s0064g01360.t01	Wine grape	mitochondrion	69.98	68.74
Solyc01g086740.2.1	Tomato	mitochondrion	65.01	65.01
PGSC0003DMT400064990	Potato	mitochondrion	64.79	64.79
Zm00001d035975_P001	Maize	mitochondrion	60.27	62.24
GSMUA_Achr4P11580_001	Banana	mitochondrion	63.21	61.95
Zm00001d035974_P001	Maize	mitochondrion	59.82	61.77
TraesCS7D01G045900.2	Wheat	mitochondrion	54.85	60.9
EER89093	Sorghum	mitochondrion, plastid	59.37	60.46
CDY54516	Canola	mitochondrion	61.17	59.82
GSMUA_Achr3P00410_001	Banana	mitochondrion	60.5	59.56
Bra037514.1-P	Field mustard	mitochondrion	59.82	58.63
CDX86330	Canola	mitochondrion	60.05	58.33
Bra020721.1-P	Field mustard	mitochondrion	58.69	58.17
CDY35761	Canola	mitochondrion	58.69	58.17
CDY45921	Canola	mitochondrion	58.69	58.17
Os06t0116800-01	Rice	mitochondrion	58.01	58.14
TraesCS7A01G051000.1	Wheat	mitochondrion	57.56	58.09
AT5G48030.1	Thale cress	mitochondrion	59.59	57.89
EES15725	Sorghum	mitochondrion, plastid	54.63	57.76
TraesCS5A01G117600.1	Wheat	plastid	54.4	57.24
HORVU5Hr1G036400.3	Barley	plastid	54.63	56.67
Os12t0168400-01	Rice	plastid	53.5	56.56
TraesCS5D01G129700.1	Wheat	mitochondrion, plastid	53.72	56.53
TraesCS5B01G117900.1	Wheat	mitochondrion, plastid	53.72	56.53
HORVU7Hr1G009230.8	Barley	plastid	56.21	55.96
Zm00001d023537_P002	Maize	mitochondrion	53.05	55.29
GSMUA_Achr4P12400_001	Banana	mitochondrion	52.6	49.79
KRH59311	Soybean	plastid	34.09	34.87
KRH43163	Soybean	plastid	34.09	34.55
KRH31310	Soybean	nucleus, plastid	33.63	33.86
KRG97564	Soybean	plastid	33.18	33.41
KRH61858	Soybean	cytosol	10.61	33.1
KRH16800	Soybean	mitochondrion	33.86	31.98
KRH72418	Soybean	mitochondrion	33.63	31.77
KRG96505	Soybean	nucleus	23.7	30.61
KRH69388	Soybean	cytosol	18.96	30.43
KRH68242	Soybean	endoplasmic reticulum	23.48	30.32
KRH74747	Soybean	cytosol	18.74	29.96
KRH52529	Soybean	cytosol	21.44	29.14
KRH61857	Soybean	cytosol, nucleus	7.45	28.45
KRH48754	Soybean	endoplasmic reticulum	26.64	28.1
KRH69236	Soybean	endoplasmic reticulum	21.9	28.03
KRH45833	Soybean	cytosol	18.28	28.03
KRH66593	Soybean	endoplasmic reticulum	26.19	27.62
KRH00241	Soybean	cytosol, nucleus	20.99	27.43
KRG99186	Soybean	cytosol	17.83	27.34
KRH09715	Soybean	nucleus, plastid	30.25	27.18
KRG88624	Soybean	nucleus	20.54	27.0
KRH65726	Soybean	nucleus	20.54	27.0
KRH10937	Soybean	cytosol	20.54	26.84
KRH26709	Soybean	nucleus	25.06	26.62
KRH49388	Soybean	cytosol	20.77	26.59
KRH22611	Soybean	nucleus	24.83	26.38
KRH23590	Soybean	nucleus	21.22	26.33
KRG88903	Soybean	nucleus	24.61	26.14
KRH75968	Soybean	nucleus	19.86	26.11
KRH25647	Soybean	nucleus	20.54	26.07
KRH25334	Soybean	nucleus	24.38	25.9
KRH55895	Soybean	endoplasmic reticulum, nucleus	20.54	25.85
KRH63415	Soybean	cytosol	8.35	25.17
KRH54495	Soybean	nucleus	19.86	25.07
KRH10940	Soybean	cytosol	18.96	25.0
KRH55068	Soybean	cytosol	7.67	24.82
KRH44477	Soybean	plastid	24.61	24.55
KRH21362	Soybean	cytosol	18.74	24.41
KRH63417	Soybean	nucleus	11.06	24.14
KRH48662	Soybean	nucleus, plastid	26.41	22.29
KRH21363	Soybean	cytosol	15.35	22.08
KRH40259	Soybean	cytosol	7.9	22.01
KRH12423	Soybean	cytoskeleton, cytosol, nucleus	12.19	20.53
KRH60063	Soybean	endoplasmic reticulum, golgi	8.35	18.69
KRH10414	Soybean	cytosol	13.54	15.75
KRH44054	Soybean	cytosol	12.42	14.32
KRH64663	Soybean	plastid	11.29	14.12
KRG90292	Soybean	cytosol, nucleus, plastid	7.45	11.54

Protein Annotations

Gene3D:1.10.287.110	EntrezGene:100799735	MapMan:19.1.3.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	EMBL:ACUP02007813
InterPro:DnaJ	InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	EnsemblPlantsGene:GLYMA_12G239500	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0006950
GO:GO:0008150	GO:GO:0009408	GO:GO:0009628	GO:GO:0009987	GO:GO:0031072	GO:GO:0046872
GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf	UniProt:I1LVF4	InterPro:IPR001305
InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	EnsemblPlants:KRH27511	ProteinID:KRH27511	ProteinID:KRH27511.1
HAMAP:MF_01152	PFAM:PF00226	PFAM:PF00684	PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636
PFscan:PS50076	PFscan:PS51188	PANTHER:PTHR43096	PANTHER:PTHR43096:SF25	SMART:SM00271	SUPFAM:SSF46565
SUPFAM:SSF49493	SUPFAM:SSF57938	UniParc:UPI000233D181	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr12:-:39830885..39838563

Molecular Weight (calculated)

48622.6 Da

IEP (calculated)

8.847

GRAVY (calculated)

-0.500

Length

443 amino acids

Sequence
(BLAST)

001: MVRSHGVTLI NRLARRSFCH ANDSVYQALF QRGYRTLNSG PCNPSRVVGS FASNAGDGVN LKKWLLLGAA NKYWGPSRSI HGSASLARDY YDILGVSKNA
101: SSSEIKKAYY GLAKKLHPDT NKDDPEAEKK FQEVSIAYEV LKDEERRQQY DQLGHDAYVN QQSTGSGGEG GFNPFEQIFR DHDFVKSFFH QNIGGEDVKT
201: FIELSFMEAV QGCTKTLTFQ TDVLCNACGG SGVPPGTRPE TCKRCKGSGV LFVQAGIFRM ESTCGTCKGT GKIVSNYCKS CRGAKIVKGT KSVKLDIMPG
301: IDSNETIKVF RSGGADPDGD HPGDLYVTIK VREDPVFRRE GSDIHVDAVL SITQAILGGT IQVPTLTGDV VLKVRPGTQP GQKVVLKKKG VKTKNSYTFG
401: DQYVHFNVNI PTNLTQRQRE LIEEFAKEEQ EECDKRRAAS ASG

Best Arabidopsis Sequence Match ( AT5G48030.1 )
(BLAST)

001: MVPSNGAKVL RLLSRRCLSS SLIQDLANQK LRGVCIGSYR RLNTSVGNHA NVIGDYASKS GHDRKWINFG GFNTNFGSTR SFHGTGSSFM SAKDYYSVLG
101: VSKNAQEGEI KKAYYGLAKK LHPDMNKDDP EAETKFQEVS KAYEILKDKE KRDLYDQVGH EAFEQNASGG FPNDQGFGGG GGGGFNPFDI FGSFNGDIFN
201: MYRQDIGGQD VKVLLDLSFM EAVQGCSKTV TFQTEMACNT CGGQGVPPGT KREKCKACNG SGMTSLRRGM LSIQTTCQKC GGAGQTFSSI CKSCRGARVV
301: RGQKSVKVTI DPGVDNSDTL KVARVGGADP EGDQPGDLYV TLKVREDPVF RREGSDIHVD AVLSVTQAIL GGTIQVPTLT GDVVVKVRPG TQPGHKVVLR
401: NKGIRARKST KFGDQYVHFN VSIPANITQR QRELLEEFSK AEQGEYEQRT ATGSSQ

Arabidopsis Description

GFA2GFA2 [Source:UniProtKB/TrEMBL;Acc:A0A178UJR3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.