Factsheet for TraesCS7D01G045900.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G051000.1	Wheat	mitochondrion	95.99	87.24
HORVU7Hr1G009230.8	Barley	plastid	92.73	83.15
Zm00001d035975_P001	Maize	mitochondrion	76.69	71.33
Zm00001d035974_P001	Maize	mitochondrion	76.44	71.1
EER89093	Sorghum	mitochondrion, plastid	77.44	71.03
Os06t0116800-01	Rice	mitochondrion	76.44	69.0
GSMUA_Achr4P11580_001	Banana	mitochondrion	69.92	61.73
VIT_13s0064g01360.t01	Wine grape	mitochondrion	66.42	58.76
GSMUA_Achr3P00410_001	Banana	mitochondrion	65.66	58.22
KRH27511	Soybean	mitochondrion	60.9	54.85
KRH43470	Soybean	mitochondrion	60.9	54.73
Solyc01g086740.2.1	Tomato	mitochondrion	60.15	54.18
KRH36456	Soybean	mitochondrion	60.15	54.18
KRH13903	Soybean	mitochondrion	60.15	54.05
PGSC0003DMT400064990	Potato	mitochondrion	59.65	53.72
Bra020721.1-P	Field mustard	mitochondrion	59.15	52.8
CDY45921	Canola	mitochondrion	59.15	52.8
CDY35761	Canola	mitochondrion	59.15	52.8
Bra037514.1-P	Field mustard	mitochondrion	59.4	52.43
CDY54516	Canola	mitochondrion	59.4	52.32
CDX86330	Canola	mitochondrion	59.4	51.97
AT5G48030.1	Thale cress	mitochondrion	58.65	51.32
TraesCS5D01G129700.1	Wheat	mitochondrion, plastid	52.88	50.12
GSMUA_Achr4P12400_001	Banana	mitochondrion	57.64	49.15
TraesCS7D01G177900.1	Wheat	mitochondrion	36.09	30.06
TraesCS1D01G107200.1	Wheat	nucleus	24.31	27.71
TraesCS1D01G403500.1	Wheat	cytosol	24.81	27.42
TraesCS6D01G356800.1	Wheat	plastid	31.83	26.13
TraesCS5D01G125500.1	Wheat	nucleus	34.84	25.84
TraesCS3D01G168500.1	Wheat	cytosol	22.31	25.8
TraesCS5D01G434100.1	Wheat	nucleus	27.07	25.65
TraesCS7D01G293900.1	Wheat	cytosol	21.55	24.86
TraesCS6D01G232600.1	Wheat	nucleus	26.07	24.47
TraesCS5D01G382400.1	Wheat	plastid	25.81	24.47
TraesCS4D01G241300.2	Wheat	plastid	31.58	23.33
TraesCS1D01G072800.1	Wheat	nucleus	19.8	22.97
TraesCS1D01G267500.1	Wheat	cytosol	18.05	21.75
TraesCS3D01G379400.1	Wheat	cytosol	17.04	20.92

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.3.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	ncoils:Coil	InterPro:DnaJ
InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009408
GO:GO:0009628	GO:GO:0009987	GO:GO:0031072	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom
InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	HAMAP:MF_01152
PFAM:PF00226	PFAM:PF00684	PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076
PFscan:PS51188	PANTHER:PTHR43096	PANTHER:PTHR43096:SF25	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493
SUPFAM:SSF57938	EnsemblPlantsGene:TraesCS7D01G045900	EnsemblPlants:TraesCS7D01G045900.2	TIGR:cd06257	TIGR:cd10719	TIGR:cd10747
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7D:+:23490567..23495321

Molecular Weight (calculated)

43089.4 Da

IEP (calculated)

8.288

GRAVY (calculated)

-0.505

Length

399 amino acids

Sequence
(BLAST)

001: MGRRGPRGAL LEAALLVAEQ VLPRTRPVAV RDYYDVLGVR KDAGQGEIKK AYYALAKKLH PDTNKGDADA EKKFQEVQKA YETLKDEEKK AVYDQVGPDQ
101: YERAAAGGGG AGGFEGGFGN PFEDIFGTGR TGGMNDFLRN IFKDRESGGQ DVKVKLELSF MEAVEGCKKT INFQTLVTCE TCNGAGVPAG TKPETCLACR
201: GSGYMVLQTG PFRMQSTCTQ CGGSGKTVKD FCKSCRGKKV VPGIKTVSID IAPGTDDEDV MKVLRSGQAD PDGLRAGDLY VAIKVREDPV FRREKGDIHV
301: DAVLNVTQAI LGGTVQVPTL AGDVVLKVKP GTQPGQKVVL RGKGIKTRNS YSYGDQYVHF NVKIPVNLTQ KQRMLLEEFE KEEKGEDDKD AEKAAGASG

Best Arabidopsis Sequence Match ( AT5G48030.1 )
(BLAST)

001: MVPSNGAKVL RLLSRRCLSS SLIQDLANQK LRGVCIGSYR RLNTSVGNHA NVIGDYASKS GHDRKWINFG GFNTNFGSTR SFHGTGSSFM SAKDYYSVLG
101: VSKNAQEGEI KKAYYGLAKK LHPDMNKDDP EAETKFQEVS KAYEILKDKE KRDLYDQVGH EAFEQNASGG FPNDQGFGGG GGGGFNPFDI FGSFNGDIFN
201: MYRQDIGGQD VKVLLDLSFM EAVQGCSKTV TFQTEMACNT CGGQGVPPGT KREKCKACNG SGMTSLRRGM LSIQTTCQKC GGAGQTFSSI CKSCRGARVV
301: RGQKSVKVTI DPGVDNSDTL KVARVGGADP EGDQPGDLYV TLKVREDPVF RREGSDIHVD AVLSVTQAIL GGTIQVPTLT GDVVVKVRPG TQPGHKVVLR
401: NKGIRARKST KFGDQYVHFN VSIPANITQR QRELLEEFSK AEQGEYEQRT ATGSSQ

Arabidopsis Description

GFA2GFA2 [Source:UniProtKB/TrEMBL;Acc:A0A178UJR3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.