Factsheet for PGSC0003DMT400064990

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
nucleus 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g086740.2.1	Tomato	mitochondrion	98.42	98.42
VIT_13s0064g01360.t01	Wine grape	mitochondrion	68.4	67.18
KRH27511	Soybean	mitochondrion	64.79	64.79
KRH36456	Soybean	mitochondrion	63.88	63.88
KRH43470	Soybean	mitochondrion	63.21	63.06
KRH13903	Soybean	mitochondrion	62.98	62.84
Bra020721.1-P	Field mustard	mitochondrion	61.85	61.3
CDY35761	Canola	mitochondrion	61.85	61.3
CDY45921	Canola	mitochondrion	61.85	61.3
CDY54516	Canola	mitochondrion	62.3	60.93
GSMUA_Achr4P11580_001	Banana	mitochondrion	61.85	60.62
AT5G48030.1	Thale cress	mitochondrion	62.3	60.53
Bra037514.1-P	Field mustard	mitochondrion	61.63	60.4
CDX86330	Canola	mitochondrion	61.4	59.65
TraesCS7D01G045900.2	Wheat	mitochondrion	53.72	59.65
Zm00001d035975_P001	Maize	mitochondrion	57.56	59.44
EER89093	Sorghum	mitochondrion, plastid	58.24	59.31
Zm00001d035974_P001	Maize	mitochondrion	57.34	59.21
GSMUA_Achr3P00410_001	Banana	mitochondrion	59.37	58.44
TraesCS7A01G051000.1	Wheat	mitochondrion	55.53	56.04
Os06t0116800-01	Rice	mitochondrion	55.76	55.88
EES15725	Sorghum	mitochondrion, plastid	52.37	55.37
HORVU7Hr1G009230.8	Barley	plastid	55.3	55.06
Os12t0168400-01	Rice	plastid	51.47	54.42
HORVU5Hr1G036400.3	Barley	plastid	52.37	54.33
TraesCS5B01G117900.1	Wheat	mitochondrion, plastid	51.24	53.92
TraesCS5A01G117600.1	Wheat	plastid	51.02	53.68
TraesCS5D01G129700.1	Wheat	mitochondrion, plastid	50.79	53.44
Zm00001d023537_P002	Maize	mitochondrion	50.79	52.94
GSMUA_Achr4P12400_001	Banana	mitochondrion	50.11	47.44
PGSC0003DMT400032760	Potato	plastid	33.63	33.48
PGSC0003DMT400007444	Potato	cytosol	18.51	26.45
PGSC0003DMT400045398	Potato	mitochondrion	18.51	26.37
PGSC0003DMT400007728	Potato	nucleus	24.83	26.25
PGSC0003DMT400059397	Potato	cytosol	20.09	26.18
PGSC0003DMT400005019	Potato	cytosol	24.61	26.01
PGSC0003DMT400060145	Potato	cytosol	24.38	25.78
PGSC0003DMT400081223	Potato	cytosol	19.64	25.51
PGSC0003DMT400023249	Potato	endoplasmic reticulum, golgi	19.86	25.51
PGSC0003DMT400024267	Potato	cytoskeleton, cytosol, nucleus	19.64	25.44
PGSC0003DMT400083040	Potato	cytosol	19.19	25.22
PGSC0003DMT400065401	Potato	nucleus	23.7	25.06
PGSC0003DMT400083824	Potato	cytosol	18.28	25.0
PGSC0003DMT400018083	Potato	nucleus	23.25	24.58
PGSC0003DMT400036786	Potato	plastid	29.35	24.44
PGSC0003DMT400066980	Potato	nucleus	22.8	24.05
PGSC0003DMT400062759	Potato	cytosol	14.45	18.44
PGSC0003DMT400045241	Potato	extracellular, mitochondrion	10.16	11.69

Protein Annotations

Gene3D:1.10.287.110	EntrezGene:102580612	MapMan:19.1.3.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	InterPro:DnaJ
InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0000003	GO:GO:0000166	GO:GO:0000740
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006457	GO:GO:0006950	GO:GO:0007275
GO:GO:0008150	GO:GO:0008219	GO:GO:0009408	GO:GO:0009553	GO:GO:0009558	GO:GO:0009628
GO:GO:0009653	GO:GO:0009856	GO:GO:0009987	GO:GO:0010197	GO:GO:0010198	GO:GO:0016043
GO:GO:0030154	GO:GO:0031072	GO:GO:0046872	GO:GO:0051082	GO:GO:0051085	InterPro:HSP40/DnaJ_pept-bd
InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf
UniProt:M1CD82	HAMAP:MF_01152	PFAM:PF00226	PFAM:PF00684	PFAM:PF01556	EnsemblPlantsGene:PGSC0003DMG400025245
PGSC:PGSC0003DMG400025245	EnsemblPlants:PGSC0003DMT400064990	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PFscan:PS51188
PANTHER:PTHR43096	PANTHER:PTHR43096:SF25	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	SUPFAM:SSF57938
TIGRFAMs:TIGR02349	UniParc:UPI0002969B6B	RefSeq:XP_006366501.1	SEG:seg	:	:

Description

DnaJ [Source:PGSC_GENE;Acc:PGSC0003DMG400025245]

Coordinates

chr1:-:66353830..66364552

Molecular Weight (calculated)

47866.8 Da

IEP (calculated)

8.990

GRAVY (calculated)

-0.477

Length

443 amino acids

Sequence
(BLAST)

001: MVSSNGLRLA HRLARCTFSS ATGSLLKGGC RGYNTAVCNQ TRGLFYFNSK NGGSERDWLR LGQFKSNFGA TRSIHGTGMS MKDFYEVLGV NRNATASEIK
101: KAYYGLAKQL HPDMNKDDPN AEKKFQEVSK AYEVLKDDST REQYDQLGHD AFNNMNNGGG GGPGFDPFGG FKSPFEDMFK NADIFGNIFN RDMGGEDVKV
201: PIELSFMEAV QGCSKTITFQ TDLPCTACGG SGVPPGTKPE TCRRCKGSGV SISQTGPFTL QTTCPACKGT GKIVSSFCKS CKGNRVLRGP KTVKVDIMPG
301: VDTDETLKVY GSGGADPEGN RPGDLYVVLK VREDPVFRRE GSDIHVDAVL SITQAILGGT IQVPTLTGDV VVKVRAGTQP GQKVVLKKKG IKGRNSFSFG
401: DQFVHFNVSI PTNLTPRQRQ LIEEFAKEEQ GEYDKGAAAG ASR

Best Arabidopsis Sequence Match ( AT5G48030.1 )
(BLAST)

001: MVPSNGAKVL RLLSRRCLSS SLIQDLANQK LRGVCIGSYR RLNTSVGNHA NVIGDYASKS GHDRKWINFG GFNTNFGSTR SFHGTGSSFM SAKDYYSVLG
101: VSKNAQEGEI KKAYYGLAKK LHPDMNKDDP EAETKFQEVS KAYEILKDKE KRDLYDQVGH EAFEQNASGG FPNDQGFGGG GGGGFNPFDI FGSFNGDIFN
201: MYRQDIGGQD VKVLLDLSFM EAVQGCSKTV TFQTEMACNT CGGQGVPPGT KREKCKACNG SGMTSLRRGM LSIQTTCQKC GGAGQTFSSI CKSCRGARVV
301: RGQKSVKVTI DPGVDNSDTL KVARVGGADP EGDQPGDLYV TLKVREDPVF RREGSDIHVD AVLSVTQAIL GGTIQVPTLT GDVVVKVRPG TQPGHKVVLR
401: NKGIRARKST KFGDQYVHFN VSIPANITQR QRELLEEFSK AEQGEYEQRT ATGSSQ

Arabidopsis Description

GFA2GFA2 [Source:UniProtKB/TrEMBL;Acc:A0A178UJR3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.