Factsheet for TraesCS7A01G051000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G045900.2	Wheat	mitochondrion	87.24	95.99
HORVU7Hr1G009230.8	Barley	plastid	90.66	89.44
EER89093	Sorghum	mitochondrion, plastid	77.9	78.62
Os06t0116800-01	Rice	mitochondrion	77.45	76.92
Zm00001d035974_P001	Maize	mitochondrion	74.72	76.46
Zm00001d035975_P001	Maize	mitochondrion	74.26	75.99
GSMUA_Achr4P11580_001	Banana	mitochondrion	67.2	65.27
GSMUA_Achr3P00410_001	Banana	mitochondrion	63.78	62.22
VIT_13s0064g01360.t01	Wine grape	mitochondrion	62.41	60.75
KRH27511	Soybean	mitochondrion	58.09	57.56
KRH36456	Soybean	mitochondrion	57.4	56.88
KRH43470	Soybean	mitochondrion	56.72	56.08
Solyc01g086740.2.1	Tomato	mitochondrion	56.49	55.98
KRH13903	Soybean	mitochondrion	56.26	55.63
PGSC0003DMT400064990	Potato	mitochondrion	56.04	55.53
Bra020721.1-P	Field mustard	mitochondrion	56.49	55.48
CDY45921	Canola	mitochondrion	56.49	55.48
CDY35761	Canola	mitochondrion	56.49	55.48
Bra037514.1-P	Field mustard	mitochondrion	56.95	55.31
CDX86330	Canola	mitochondrion	57.4	55.26
CDY54516	Canola	mitochondrion	56.72	54.97
AT5G48030.1	Thale cress	mitochondrion	55.81	53.73
TraesCS5A01G117600.1	Wheat	plastid	50.34	52.49
GSMUA_Achr4P12400_001	Banana	mitochondrion	55.81	52.35
TraesCS5A01G115000.1	Wheat	plastid	33.03	34.94
TraesCS7A01G176600.1	Wheat	mitochondrion	34.85	32.14
TraesCS1A01G099300.1	Wheat	nucleus	22.1	27.71
TraesCS6A01G372700.1	Wheat	plastid	29.61	26.64
TraesCS1A01G395300.1	Wheat	cytosol	22.32	26.34
TraesCS5A01G426100.1	Wheat	nucleus	24.37	25.42
TraesCS3A01G161200.1	Wheat	nucleus	19.82	25.22
TraesCS3A01G520100.1	Wheat	cytosol	15.26	25.09
TraesCS7A01G298000.1	Wheat	cytosol	19.36	24.57
TraesCS6A01G250800.1	Wheat	nucleus	23.46	24.24
TraesCS5A01G372900.1	Wheat	nucleus	23.23	24.23
TraesCS6A01G087000.1	Wheat	cytosol	18.0	23.44
TraesCS4A01G064300.2	Wheat	plastid	28.47	23.15
TraesCS1A01G070300.1	Wheat	cytosol	17.77	23.01
TraesCS1A01G267600.1	Wheat	cytosol	16.4	22.02
TraesCS3A01G386400.1	Wheat	cytosol	14.35	19.69
TraesCS6A01G421300.1	Wheat	cytosol	7.52	15.64

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.3.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	ncoils:Coil	InterPro:DnaJ
InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009408
GO:GO:0009628	GO:GO:0009987	GO:GO:0031072	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom
InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	HAMAP:MF_01152
PFAM:PF00226	PFAM:PF00684	PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076
PFscan:PS51188	PANTHER:PTHR43096	PANTHER:PTHR43096:SF25	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493
SUPFAM:SSF57938	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS7A01G051000	EnsemblPlants:TraesCS7A01G051000.1	TIGR:cd06257	TIGR:cd10719
TIGR:cd10747	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7A:+:24586486..24591416

Molecular Weight (calculated)

47397.3 Da

IEP (calculated)

9.365

GRAVY (calculated)

-0.519

Length

439 amino acids

Sequence
(BLAST)

001: MRLPGGARLA LLLARRSLST AAASSARSSS LHASRAHRAR WGDAARAAPS WRPPFSSPSR FFHGTRPVAV RDYYDVLGVR KDAGQGEIKK AYYALAKKLH
101: PDTNKGDADA EKKFQEVQKA YETLKDEEKK AVYDQVGPDQ YERAAAGGGG AGGFEGGFGN PFEDIFNAGR TGGMNDFLRN IFKDRESGGQ DVKVKLELSF
201: MEAVEGCKKT INFQTLVTCE TCNGAGVPAG TKPETCLACR GSGYMVLQTG PFRMQSTCTQ CGGSGKTVKD FCKSCRGKKV VPGIKTVSID IAPGTDDEDV
301: MKVLRSGQAD PDGLRAGDLY VAIKVREDPV FRREKGDIHV DAVLNVTQAI LGGTVQVPTL AGDVVLKVKP GTQPGQKVVL RGKGIKTRNS YSYGDQYVHF
401: NVKIPVNLTQ KQRMLLEEFE KEEKGEDDKD AEKAAGASG

Best Arabidopsis Sequence Match ( AT5G48030.1 )
(BLAST)

001: MVPSNGAKVL RLLSRRCLSS SLIQDLANQK LRGVCIGSYR RLNTSVGNHA NVIGDYASKS GHDRKWINFG GFNTNFGSTR SFHGTGSSFM SAKDYYSVLG
101: VSKNAQEGEI KKAYYGLAKK LHPDMNKDDP EAETKFQEVS KAYEILKDKE KRDLYDQVGH EAFEQNASGG FPNDQGFGGG GGGGFNPFDI FGSFNGDIFN
201: MYRQDIGGQD VKVLLDLSFM EAVQGCSKTV TFQTEMACNT CGGQGVPPGT KREKCKACNG SGMTSLRRGM LSIQTTCQKC GGAGQTFSSI CKSCRGARVV
301: RGQKSVKVTI DPGVDNSDTL KVARVGGADP EGDQPGDLYV TLKVREDPVF RREGSDIHVD AVLSVTQAIL GGTIQVPTLT GDVVVKVRPG TQPGHKVVLR
401: NKGIRARKST KFGDQYVHFN VSIPANITQR QRELLEEFSK AEQGEYEQRT ATGSSQ

Arabidopsis Description

GFA2GFA2 [Source:UniProtKB/TrEMBL;Acc:A0A178UJR3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.