Factsheet for GSMUA_Achr4P11580_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P00410_001	Banana	mitochondrion	77.21	77.56
Zm00001d035975_P001	Maize	mitochondrion	67.92	71.56
EER89093	Sorghum	mitochondrion, plastid	68.58	71.26
Zm00001d035974_P001	Maize	mitochondrion	67.48	71.1
TraesCS7D01G045900.2	Wheat	mitochondrion	61.73	69.92
Os06t0116800-01	Rice	mitochondrion	67.92	69.46
VIT_13s0064g01360.t01	Wine grape	mitochondrion	69.03	69.18
GSMUA_Achr4P12400_001	Banana	mitochondrion	71.02	68.59
TraesCS7A01G051000.1	Wheat	mitochondrion	65.27	67.2
HORVU7Hr1G009230.8	Barley	plastid	64.38	65.39
KRH27511	Soybean	mitochondrion	61.95	63.21
KRH36456	Soybean	mitochondrion	61.5	62.75
Solyc01g086740.2.1	Tomato	mitochondrion	60.84	62.08
PGSC0003DMT400064990	Potato	mitochondrion	60.62	61.85
KRH43470	Soybean	mitochondrion	59.73	60.81
KRH13903	Soybean	mitochondrion	59.29	60.36
Bra020721.1-P	Field mustard	mitochondrion	58.63	59.28
CDY35761	Canola	mitochondrion	58.63	59.28
CDY45921	Canola	mitochondrion	58.63	59.28
CDY54516	Canola	mitochondrion	58.85	58.72
Bra037514.1-P	Field mustard	mitochondrion	58.63	58.63
AT5G48030.1	Thale cress	mitochondrion	58.85	58.33
CDX86330	Canola	mitochondrion	58.63	58.11
GSMUA_Achr1P15780_001	Banana	plastid	32.3	32.81
GSMUA_Achr6P02160_001	Banana	mitochondrion	33.85	32.35
GSMUA_Achr3P00920_001	Banana	mitochondrion	32.08	32.08
GSMUA_AchrUn_...	Banana	cytosol	10.62	32.0
GSMUA_AchrUn_...	Banana	cytosol	19.69	29.77
GSMUA_Achr1P01630_001	Banana	cytosol	15.49	29.54
GSMUA_Achr8P33890_001	Banana	endoplasmic reticulum	21.68	28.49
GSMUA_Achr11P...	Banana	plastid	30.75	28.37
GSMUA_Achr3P15480_001	Banana	cytosol	18.14	28.08
GSMUA_Achr4P20410_001	Banana	cytosol	32.52	28.0
GSMUA_Achr8P16030_001	Banana	cytosol	19.91	27.19
GSMUA_Achr4P12330_001	Banana	nucleus	19.69	27.13
GSMUA_Achr6P13820_001	Banana	cytosol	10.18	26.9
GSMUA_Achr6P29960_001	Banana	nucleus	24.11	26.33
GSMUA_Achr4P22790_001	Banana	cytosol	24.34	26.32
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, vacuole	21.68	26.27
GSMUA_Achr4P31390_001	Banana	cytosol	24.11	26.2
GSMUA_Achr7P01290_001	Banana	nucleus	24.11	26.14
GSMUA_Achr9P25940_001	Banana	nucleus	23.89	25.9
GSMUA_Achr8P11020_001	Banana	nucleus	22.79	25.75
GSMUA_Achr11P...	Banana	cytosol	21.68	25.72
GSMUA_Achr2P19740_001	Banana	cytosol	18.14	25.47
GSMUA_AchrUn_...	Banana	cytosol	18.14	25.39
GSMUA_Achr9P23300_001	Banana	cytosol	18.14	23.84
GSMUA_Achr11P...	Banana	cytosol	19.25	23.26
GSMUA_Achr9P29030_001	Banana	mitochondrion, plastid	27.88	23.12
GSMUA_Achr6P15600_001	Banana	cytosol	20.8	21.27
GSMUA_Achr7P03030_001	Banana	cytosol	14.38	20.44
GSMUA_Achr8P32540_001	Banana	mitochondrion	7.96	12.95

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.3.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	ncoils:Coil	InterPro:DnaJ
InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009408
GO:GO:0009628	GO:GO:0009987	GO:GO:0031072	GO:GO:0046872	GO:GO:0051082	EnsemblPlantsGene:GSMUA_Achr4G11580_001
EnsemblPlants:GSMUA_Achr4P11580_001	EnsemblPlants:GSMUA_Achr4T11580_001	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305
InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	UniProt:M0SN23	HAMAP:MF_01152	PFAM:PF00226
PFAM:PF00684	PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PFscan:PS51188
PANTHER:PTHR43096	PANTHER:PTHR43096:SF25	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	SUPFAM:SSF57938
UniParc:UPI0002961EB1	SEG:seg	:	:	:	:

Description

Putative Chaperone protein dnaJ 1, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr4G11580_001]

Coordinates

chr4:+:8334006..8345942

Molecular Weight (calculated)

48985.0 Da

IEP (calculated)

8.592

GRAVY (calculated)

-0.420

Length

452 amino acids

Sequence
(BLAST)

001: MRPHAARLAF WFARRSLRSK LLDESPIIAI EVASGRLAPG VCSSSRGFRS GICDEAKVRH GIFDGAFQRH FVSSRSFHGT RSVSARDYYD VLGVSKNASA
101: SDIKKAYYAL AKKLHPDTNK DADAERKFQE VQRAYEVLKD EDKRRLYDQV GPDAFEQAAA GGGAGPGGPF GGAGFGNPFE DVFGGGSRFN DFFKSMFGDR
201: DFGGQDVKVP LEISFMEAVQ GCTKTVTFQT AVTCEECDGA GFPPGTKPET CRACRGSGMI FMQNGPFRLQ TTCSQCGGSG ITVKNLCKSC KGQRVVSGVK
301: SVKLDVMPGV DDDETIKVYR SGGADPDGNQ PGDLYVTIKV REDPVFRREK ADIHVDAVLS ITQAILGGTI QVPTLTGDVV LKVRPGTQPA QKVVLRGKGI
401: KTRNSSYGDQ YVHFNVNIPV NLTQRQRMLI EEFAKEEQRE DEKGATAAGA SG

Best Arabidopsis Sequence Match ( AT5G48030.1 )
(BLAST)

001: MVPSNGAKVL RLLSRRCLSS SLIQDLANQK LRGVCIGSYR RLNTSVGNHA NVIGDYASKS GHDRKWINFG GFNTNFGSTR SFHGTGSSFM SAKDYYSVLG
101: VSKNAQEGEI KKAYYGLAKK LHPDMNKDDP EAETKFQEVS KAYEILKDKE KRDLYDQVGH EAFEQNASGG FPNDQGFGGG GGGGFNPFDI FGSFNGDIFN
201: MYRQDIGGQD VKVLLDLSFM EAVQGCSKTV TFQTEMACNT CGGQGVPPGT KREKCKACNG SGMTSLRRGM LSIQTTCQKC GGAGQTFSSI CKSCRGARVV
301: RGQKSVKVTI DPGVDNSDTL KVARVGGADP EGDQPGDLYV TLKVREDPVF RREGSDIHVD AVLSVTQAIL GGTIQVPTLT GDVVVKVRPG TQPGHKVVLR
401: NKGIRARKST KFGDQYVHFN VSIPANITQR QRELLEEFSK AEQGEYEQRT ATGSSQ

Arabidopsis Description

GFA2GFA2 [Source:UniProtKB/TrEMBL;Acc:A0A178UJR3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.