Factsheet for GSMUA_Achr4P20410_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
vacuole 1
cytosol 2
mitochondrion 3
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P15780_001	Banana	plastid	74.48	87.87
GSMUA_Achr3P00920_001	Banana	mitochondrion	73.33	85.18
Solyc01g105340.2.1	Tomato	plastid	55.24	82.15
TraesCS5A01G115000.1	Wheat	plastid	62.67	79.28
Os05t0333500-01	Rice	mitochondrion, plastid	64.38	75.62
Os05t0334000-01	Rice	mitochondrion, plastid	64.38	75.62
Os05t0334400-01	Rice	mitochondrion, plastid	64.38	75.62
EES13204	Sorghum	plastid	64.38	75.45
KRH59311	Soybean	plastid	61.14	74.13
PGSC0003DMT400032760	Potato	plastid	62.48	73.71
KRH43163	Soybean	plastid	61.14	73.46
KRH31310	Soybean	nucleus, plastid	60.19	71.82
KRG97564	Soybean	plastid	60.0	71.59
AT2G22360.1	Thale cress	plastid	59.24	70.36
CDX89453	Canola	plastid	60.57	70.35
CDY25588	Canola	plastid	60.76	70.26
Bra030245.1-P	Field mustard	plastid	60.38	70.13
AT4G39960.1	Thale cress	mitochondrion, plastid	58.86	69.13
VIT_00s0324g00040.t01	Wine grape	plastid	63.05	68.81
Zm00001d024635_P001	Maize	mitochondrion	64.57	68.76
Zm00001d049583_P003	Maize	cytosol, mitochondrion, nucleus, plastid	64.38	68.28
TraesCS5B01G115900.1	Wheat	plastid	62.48	67.91
Zm00001d047195_P001	Maize	mitochondrion	42.29	67.27
CDY63891	Canola	cytosol	58.86	63.58
CDX69371	Canola	mitochondrion	59.43	62.28
TraesCS5D01G125500.1	Wheat	nucleus	63.24	61.71
Bra011820.1-P	Field mustard	cytosol	59.81	59.36
HORVU5Hr1G037600.2	Barley	cytosol, nucleus	64.76	58.32
GSMUA_Achr11P...	Banana	plastid	38.48	41.22
GSMUA_AchrUn_...	Banana	cytosol	10.1	35.33
GSMUA_Achr6P13820_001	Banana	cytosol	11.24	34.5
GSMUA_AchrUn_...	Banana	cytosol	19.43	34.11
GSMUA_Achr4P11580_001	Banana	mitochondrion	28.0	32.52
GSMUA_Achr3P00410_001	Banana	mitochondrion	27.43	32.0
GSMUA_Achr9P29030_001	Banana	mitochondrion, plastid	33.14	31.93
GSMUA_Achr3P15480_001	Banana	cytosol	17.52	31.51
GSMUA_Achr8P16030_001	Banana	cytosol	19.43	30.82
GSMUA_Achr4P12330_001	Banana	nucleus	19.05	30.49
GSMUA_Achr2P19740_001	Banana	cytosol	18.29	29.81
GSMUA_Achr1P01630_001	Banana	cytosol	13.33	29.54
GSMUA_AchrUn_...	Banana	cytosol	18.1	29.41
GSMUA_Achr6P02160_001	Banana	mitochondrion	25.71	28.54
GSMUA_Achr8P33890_001	Banana	endoplasmic reticulum	18.67	28.49
GSMUA_Achr4P12400_001	Banana	mitochondrion	25.33	28.42
GSMUA_Achr9P23300_001	Banana	cytosol	18.1	27.62
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, vacuole	19.62	27.61
GSMUA_Achr4P22790_001	Banana	cytosol	21.9	27.51
GSMUA_Achr11P...	Banana	cytosol	19.43	27.27
GSMUA_Achr8P11020_001	Banana	nucleus	20.76	27.25
GSMUA_Achr4P31390_001	Banana	cytosol	21.52	27.16
GSMUA_Achr6P29960_001	Banana	nucleus	21.33	27.05
GSMUA_Achr7P01290_001	Banana	nucleus	21.33	26.86
GSMUA_Achr11P...	Banana	cytosol	19.43	26.77
GSMUA_Achr9P25940_001	Banana	nucleus	20.76	26.14
GSMUA_Achr6P15600_001	Banana	cytosol	20.38	24.21
GSMUA_Achr7P03030_001	Banana	cytosol	13.33	22.01
GSMUA_Achr8P32540_001	Banana	mitochondrion	6.67	12.59

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.4.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	InterPro:DnaJ	InterPro:DnaJ_C
InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009408	GO:GO:0009628
GO:GO:0009987	GO:GO:0031072	GO:GO:0046872	GO:GO:0051082	EnsemblPlantsGene:GSMUA_Achr4G20410_001	EnsemblPlants:GSMUA_Achr4P20410_001
EnsemblPlants:GSMUA_Achr4T20410_001	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	UniProt:M0SQK4	HAMAP:MF_01152	PFAM:PF00226	PFAM:PF00684
PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PFscan:PS51188	PANTHER:PTHR43096
SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	SUPFAM:SSF57938	TIGRFAMs:TIGR02349	UniParc:UPI000295FE38
SEG:seg	:	:	:	:	:

Description

Chaperone protein dnaJ [Source:GMGC_GENE;Acc:GSMUA_Achr4G20410_001]

Coordinates

chr4:-:21029694..21036957

Molecular Weight (calculated)

57160.3 Da

IEP (calculated)

10.282

GRAVY (calculated)

-0.539

Length

525 amino acids

Sequence
(BLAST)

001: MIIHGRSLIG CDPDRRLASI YSPRALDLTS SVSYRIRTSR TPRRTRYPPR EGKGEADPLR RRFREKNRRL TLSSPHYISP MTTVPCRGTS VPQLGTQPQA
101: ICRNVSSGAK GCHFTNRVLM PQTGTSGNYL ASSRASFLAQ VSSSALFNDG PRLNNRRNKT ARLVVRADAD YYSVLGVSRN ASKSEIKSAY RKLARSYHPD
201: VNKEPGAEQK FKDISNAYEV LSDDEKRSLY DKYGEAGLKG AGMGMGDFSN PFDLFESLFE GMGGMGGPRA ARNRPIQGDD ESYNLVLNFK DAIFGIEKEI
301: EITRLENCGT CDGSGAKPGT KPSKCSTCGG QGQVVSSVRT PLGVFQQVMT CSSCSGTGEV STPCNTCRGD GRVRKTKRIS LKVPAGVDSG SRLRVRSEGN
401: AGRRGGPPGD LYVFIEVLSD PVLKRDGTNI LYTCKVSYID AILGTTMKVP TVDGLVDLKI PAGTQPGTTL VMAKKGVPYL GKANTRGDQL VRVQVEIPKR
501: LSSEEKKLIE ELANLSKSKT ANSRR

Best Arabidopsis Sequence Match ( AT2G22360.1 )
(BLAST)

001: MAIIQLGSTC VAQWSIRPQF AVRAYYPSRI ESTRHQNSSS QVNCLGASKS SMFSHGSLPF LSMTGMSRNM HPPRRGSRFT VRADADYYSV LGVSKNATKA
101: EIKSAYRKLA RNYHPDVNKD PGAEEKFKEI SNAYEVLSDD EKKSLYDRYG EAGLKGAAGF GNGDFSNPFD LFDSLFEGFG GGMGRGSRSR AVDGQDEYYT
201: LILNFKEAVF GMEKEIEISR LESCGTCEGS GAKPGTKPTK CTTCGGQGQV VSAARTPLGV FQQVMTCSSC NGTGEISTPC GTCSGDGRVR KTKRISLKVP
301: AGVDSGSRLR VRGEGNAGKR GGSPGDLFVV IEVIPDPILK RDDTNILYTC KISYIDAILG TTLKVPTVDG TVDLKVPAGT QPSTTLVMAK KGVPVLNKSN
401: MRGDQLVRVQ VEIPKRLSKE EKKLIEELAD MSKNKTANST SR

Arabidopsis Description

DJA6Chaperone protein dnaJ A6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SJZ7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.