Factsheet for GSMUA_Achr6P15600_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
golgi 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	golgi, nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG88624	Soybean	nucleus	54.07	70.92
KRH65726	Soybean	nucleus	53.85	70.62
VIT_08s0105g00350.t01	Wine grape	cytosol	53.85	70.41
KRH00241	Soybean	cytosol, nucleus	53.62	69.91
PGSC0003DMT400059397	Potato	cytosol	53.39	69.41
Solyc09g005350.2.1	Tomato	nucleus, plastid	53.39	69.41
AT3G08910.1	Thale cress	nucleus	50.68	69.35
KRH75968	Soybean	nucleus	52.71	69.14
Bra029729.1-P	Field mustard	nucleus	50.68	68.29
CDY64940	Canola	nucleus	50.68	68.29
CDY07893	Canola	cytosol	49.55	67.8
CDY58657	Canola	cytosol	49.77	67.48
GSMUA_Achr8P16030_001	Banana	cytosol	50.45	67.37
KRH49388	Soybean	cytosol	52.49	67.05
CDY68815	Canola	cytoskeleton, cytosol, nucleus	50.45	66.77
CDY27963	Canola	cytosol	49.55	66.57
Bra001337.1-P	Field mustard	cytoskeleton, cytosol, nucleus	50.23	66.47
GSMUA_Achr3P15480_001	Banana	cytosol	43.89	66.44
Bra040063.1-P	Field mustard	cytoskeleton, cytosol, nucleus	48.64	65.95
EES17644	Sorghum	cytosol	46.61	65.81
CDY22173	Canola	cytosol	50.0	65.77
GSMUA_AchrUn_...	Banana	cytosol	44.12	65.22
AT5G01390.1	Thale cress	cytosol	48.87	64.48
Zm00001d010958_P001	Maize	cytosol	47.51	64.42
GSMUA_Achr2P19740_001	Banana	cytosol	46.61	63.98
TraesCS1A01G070300.1	Wheat	cytosol	48.19	62.83
TraesCS1B01G088700.1	Wheat	cytosol	48.42	61.67
TraesCS1D01G072800.1	Wheat	nucleus	47.96	61.63
GSMUA_Achr11P...	Banana	cytosol	48.42	57.22
GSMUA_Achr4P12330_001	Banana	nucleus	42.31	57.01
HORVU1Hr1G015040.2	Barley	plastid	48.19	55.61
GSMUA_Achr9P23300_001	Banana	cytosol	42.76	54.94
GSMUA_AchrUn_...	Banana	cytosol	37.78	51.7
GSMUA_Achr6P13820_001	Banana	cytosol	19.0	49.12
GSMUA_AchrUn_...	Banana	cytosol	13.57	40.0
HORVU1Hr1G015060.2	Barley	plastid	23.53	36.49
GSMUA_Achr7P03030_001	Banana	cytosol	24.43	33.96
GSMUA_Achr8P33890_001	Banana	endoplasmic reticulum	24.89	31.98
GSMUA_Achr11P...	Banana	cytosol	26.24	30.45
GSMUA_Achr4P31390_001	Banana	cytosol	27.6	29.33
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, vacuole	24.66	29.22
GSMUA_Achr6P29960_001	Banana	nucleus	26.92	28.74
GSMUA_Achr9P25940_001	Banana	nucleus	26.92	28.54
GSMUA_Achr4P22790_001	Banana	cytosol	26.92	28.47
GSMUA_Achr1P01630_001	Banana	cytosol	15.16	28.27
GSMUA_Achr7P01290_001	Banana	nucleus	26.47	28.06
GSMUA_Achr8P11020_001	Banana	nucleus	25.34	28.0
GSMUA_Achr8P32540_001	Banana	mitochondrion	15.84	25.18
GSMUA_Achr3P00920_001	Banana	mitochondrion	23.76	23.23
GSMUA_Achr1P15780_001	Banana	plastid	23.3	23.15
GSMUA_Achr11P...	Banana	plastid	23.53	21.22
GSMUA_Achr4P11580_001	Banana	mitochondrion	21.27	20.8
GSMUA_Achr3P00410_001	Banana	mitochondrion	20.81	20.44
GSMUA_Achr4P20410_001	Banana	cytosol	24.21	20.38
GSMUA_Achr4P12400_001	Banana	mitochondrion	20.14	19.02
GSMUA_Achr6P02160_001	Banana	mitochondrion	19.46	18.18
GSMUA_Achr9P29030_001	Banana	mitochondrion, plastid	21.95	17.8

Protein Annotations

Gene3D:1.10.287.110	Gene3D:2.20.25.170	Gene3D:2.60.260.20	MapMan:35.1	InterPro:DnaJ_C	InterPro:DnaJ_domain
InterPro:DnaJ_domain_CS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006457	GO:GO:0008150
GO:GO:0009987	GO:GO:0051082	EnsemblPlantsGene:GSMUA_Achr6G15600_001	EnsemblPlants:GSMUA_Achr6P15600_001	EnsemblPlants:GSMUA_Achr6T15600_001	InterPro:HSP40/DnaJ_pept-bd
InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	UniProt:M0T7A8	PFAM:PF00226	PFAM:PF01556
PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR24078	PANTHER:PTHR24078:SF298	SMART:SM00271
SUPFAM:SSF46565	SUPFAM:SSF49493	UniParc:UPI000296F337	SEG:seg	:	:

Description

Putative DnaJ homolog subfamily A member 1 [Source:GMGC_GENE;Acc:GSMUA_Achr6G15600_001]

Coordinates

chr6:+:10416807..10421601

Molecular Weight (calculated)

49713.2 Da

IEP (calculated)

9.219

GRAVY (calculated)

-0.274

Length

442 amino acids

Sequence
(BLAST)

001: MGLDYYKTLG VDRNASDDDL KKAYRKLAMR WHPDKNPDNK KDAEAKFKQI SEAYDVLSDP QKRAIYDQHG EEGLKGQVPP PGAGPSEFFG GAAGTKFRFN
101: PRSADEIFSE FFGGSSPFGG GSSGAKKAPA IERVLVCSLE DLYKGATKKM KISRDVIDAS GFFHLKKDED HVICTSFNVD GWHDSMFCLG FVCFCLENVS
201: NDSSQRCNMT ARRAGPNCPK MASKPTTIEE ILTINIRPGW KKGTKITFPE KGNEHRNLIP SDLIFIIDER PHGVFKRDGN DLFVSQKISL VEALTGYTVQ
301: LTTLDGRNLT IPINSIISPT HEEVVQGEGM PITREAPKKG NLRIRFQIKF PTRLTPEQKA GIKQLWTVIF FFLFFRSNFM RLFSSLLNDV GQVNLLIVKM
401: FGLSLRVCQL SYIFVLCDSI GLQMSMFLLR RLQSRLLTQM VC

Best Arabidopsis Sequence Match ( AT2G20560.1 )
(BLAST)

001: MGVDYYKVLQ VDRSASDDDL KKAYRKLAMK WHPDKNPNNK KDAEAMFKQI SEAYEVLSDP QKKAVYDQYG EEGLKGNVPP PDAGGATYFS TGDGPTSFRF
101: NPRNADDIFA EFFGFSSPFG GGRGGTRFSS SMFGDNMFAS FGEGGGGGGG SMHHGGARKA APIENKLPCS LEDLYKGTTK KMRISREIAD VSGKTMQVEE
201: ILTIDVKPGW KKGTKITFPE KGNEQPGVIP ADLVFIIDEK PHPVFTREGN DLIVTQKISL VEALTGYTVN LTTLDGRRLT IPVTNVVHPE YEEVVPKEGM
301: PLQKDQTKRG NLRIKFNIKF PTRLTSEQKT GVKKLLG

Arabidopsis Description

At2g20560/T13C7.15 [Source:UniProtKB/TrEMBL;Acc:Q9SIL3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.