Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY64940 | Canola | nucleus | 97.57 | 97.87 |
| Bra029729.1-P | Field mustard | nucleus | 97.26 | 97.56 |
| CDY58657 | Canola | cytosol | 89.06 | 89.88 |
| CDY68815 | Canola | cytoskeleton, cytosol, nucleus | 91.19 | 89.82 |
| CDY07893 | Canola | cytosol | 88.15 | 89.78 |
| CDY22173 | Canola | cytosol | 90.27 | 88.39 |
| AT3G08910.1 | Thale cress | nucleus | 85.71 | 87.31 |
| KRG88624 | Soybean | nucleus | 79.94 | 78.04 |
| PGSC0003DMT400059397 | Potato | cytosol | 80.55 | 77.94 |
| Solyc09g005350.2.1 | Tomato | nucleus, plastid | 80.55 | 77.94 |
| KRH65726 | Soybean | nucleus | 79.64 | 77.74 |
| VIT_08s0105g00350.t01 | Wine grape | cytosol | 79.64 | 77.51 |
| KRH75968 | Soybean | nucleus | 77.51 | 75.67 |
| CDY35188 | Canola | cytosol | 67.78 | 68.83 |
| CDX92876 | Canola | cytoskeleton, cytosol, nucleus | 65.35 | 67.61 |
| CDY29908 | Canola | cytoskeleton, cytosol, nucleus | 65.96 | 67.6 |
| CDY38388 | Canola | cytosol | 69.0 | 66.37 |
| CDY65077 | Canola | cytosol | 67.78 | 66.37 |
| CDX97443 | Canola | cytosol | 60.49 | 66.11 |
| CDY13869 | Canola | cytosol | 67.48 | 65.68 |
| EES17644 | Sorghum | cytosol | 61.4 | 64.54 |
| Zm00001d010958_P001 | Maize | cytosol | 62.92 | 63.5 |
| CDY20944 | Canola | cytosol | 54.71 | 59.02 |
| TraesCS1A01G070300.1 | Wheat | cytosol | 60.49 | 58.7 |
| CDX80523 | Canola | cytosol | 56.23 | 57.63 |
| CDX88188 | Canola | cytosol | 56.23 | 57.63 |
| TraesCS1D01G072800.1 | Wheat | nucleus | 60.18 | 57.56 |
| TraesCS1B01G088700.1 | Wheat | cytosol | 60.49 | 57.35 |
| CDY20637 | Canola | cytosol | 55.02 | 56.56 |
| CDY45143 | Canola | cytoskeleton, cytosol, nucleus | 56.84 | 56.5 |
| CDY37986 | Canola | cytosol | 40.43 | 56.36 |
| CDY05498 | Canola | cytosol | 55.93 | 55.26 |
| CDY30900 | Canola | cytoskeleton, cytosol, nucleus | 56.53 | 55.19 |
| CDY54902 | Canola | cytosol | 55.62 | 54.95 |
| CDY36915 | Canola | cytosol | 55.62 | 54.79 |
| CDX83026 | Canola | cytosol | 54.1 | 54.27 |
| CDY21803 | Canola | nucleus | 54.1 | 52.66 |
| CDX68447 | Canola | cytosol | 53.8 | 51.6 |
| HORVU1Hr1G015040.2 | Barley | plastid | 59.88 | 51.44 |
| GSMUA_Achr6P15600_001 | Banana | cytosol | 66.57 | 49.55 |
| CDY24146 | Canola | cytosol | 55.93 | 48.81 |
| HORVU1Hr1G015060.2 | Barley | plastid | 32.22 | 37.19 |
| CDX67894 | Canola | endoplasmic reticulum, golgi | 34.95 | 35.17 |
| CDY59898 | Canola | endoplasmic reticulum, golgi | 37.08 | 35.16 |
| CDY63310 | Canola | endoplasmic reticulum | 36.78 | 34.87 |
| CDX89142 | Canola | endoplasmic reticulum | 36.78 | 34.87 |
| CDY11430 | Canola | golgi | 35.87 | 34.1 |
| CDX76646 | Canola | golgi | 35.87 | 34.1 |
| CDY66166 | Canola | plastid | 30.7 | 29.02 |
| CDY14974 | Canola | nucleus | 29.79 | 28.32 |
| CDY65546 | Canola | nucleus | 35.26 | 27.55 |
| CDY09117 | Canola | nucleus | 35.26 | 27.42 |
| CDX92385 | Canola | nucleus | 34.95 | 27.25 |
| CDX92386 | Canola | nucleus | 34.95 | 27.25 |
| CDX88812 | Canola | nucleus | 32.83 | 26.47 |
| CDX70980 | Canola | nucleus | 32.22 | 26.04 |
| CDY20977 | Canola | nucleus | 31.0 | 25.31 |
| CDY20589 | Canola | nucleus | 30.09 | 25.19 |
| CDX97927 | Canola | nucleus | 31.61 | 24.02 |
| CDY67277 | Canola | cytosol, nucleus, plastid | 31.31 | 23.68 |
| CDY16617 | Canola | nucleus | 13.68 | 21.63 |
| CDY45921 | Canola | mitochondrion | 28.57 | 21.03 |
| CDY35761 | Canola | mitochondrion | 28.27 | 20.81 |
| CDX89453 | Canola | plastid | 28.27 | 20.58 |
| CDY25588 | Canola | plastid | 28.27 | 20.48 |
| CDY54516 | Canola | mitochondrion | 27.96 | 20.31 |
| CDX86330 | Canola | mitochondrion | 27.96 | 20.18 |
| CDY63891 | Canola | cytosol | 28.57 | 19.34 |
| CDX69371 | Canola | mitochondrion | 28.57 | 18.76 |
| CDY58774 | Canola | plastid | 27.66 | 18.2 |
| CDX87288 | Canola | plastid | 27.05 | 17.76 |
| CDX90134 | Canola | mitochondrion | 23.1 | 17.67 |
| CDX95817 | Canola | plastid | 26.14 | 17.1 |
| CDX92166 | Canola | plastid | 26.14 | 17.03 |
| CDY35719 | Canola | mitochondrion | 23.1 | 15.29 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:19.1.5.2 | Gene3D:2.60.260.20 | GO:A0A078GTI3 | UniProt:A0A078GTI3 | EnsemblPlants:CDY27963 |
| ProteinID:CDY27963 | ProteinID:CDY27963.1 | InterPro:DnaJ_C | InterPro:DnaJ_domain | InterPro:DnaJ_domain_CS | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006457 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0051082 |
| EnsemblPlantsGene:GSBRNA2T00038884001 | InterPro:HSP40/DnaJ_pept-bd | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | PFAM:PF00226 |
| PFAM:PF01556 | PRINTS:PR00625 | ScanProsite:PS00636 | PFscan:PS50076 | PANTHER:PTHR24078 | PANTHER:PTHR24078:SF298 |
| SMART:SM00271 | SUPFAM:SSF46565 | SUPFAM:SSF49493 | UniParc:UPI0004EDC9A0 | SEG:seg | : |
Description
BnaC05g43650DBnaC05g43650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GTI3]
Coordinates
chrLK032213:+:10251..12191
Molecular Weight (calculated)
36481.4 Da
IEP (calculated)
9.860
GRAVY (calculated)
-0.639
Length
329 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVDYYKVLQ VDRNAKDEDL KKAYRKLAMK WHPDKNPNSK KEAEAKFKQI SEAYDILSDP PKRAIYDQYG EEGLNSQAPP PGSGGFPGGS NGGASFRFNG
101: RSADDIFSEF FGSSRSFGDS PFPFPFPGEV FSSYRSAKGE ASNAAPPRKA APIERQLPCS LEDLYKGTTK KMKISRDVID SFGRPSTVEE ILTIEIKPGW
201: KKGTKITFPE KGNEQRGIIP SDLVFIVDEK PHAVFKRDGN DLVITQKIPL VEALIGYTAQ VTTLDGRTLT VPVNNVISPS YEEVVKGEGM PIPKDPSRKG
301: NLRIKFNIKF PSRLTTEQKT GIKRMFSSS
101: RSADDIFSEF FGSSRSFGDS PFPFPFPGEV FSSYRSAKGE ASNAAPPRKA APIERQLPCS LEDLYKGTTK KMKISRDVID SFGRPSTVEE ILTIEIKPGW
201: KKGTKITFPE KGNEQRGIIP SDLVFIVDEK PHAVFKRDGN DLVITQKIPL VEALIGYTAQ VTTLDGRTLT VPVNNVISPS YEEVVKGEGM PIPKDPSRKG
301: NLRIKFNIKF PSRLTTEQKT GIKRMFSSS
001: MGVDYYKVLQ VDRSASDDDL KKAYRKLAMK WHPDKNPNNK KDAEAMFKQI SEAYEVLSDP QKKAVYDQYG EEGLKGNVPP PDAGGATYFS TGDGPTSFRF
101: NPRNADDIFA EFFGFSSPFG GGRGGTRFSS SMFGDNMFAS FGEGGGGGGG SMHHGGARKA APIENKLPCS LEDLYKGTTK KMRISREIAD VSGKTMQVEE
201: ILTIDVKPGW KKGTKITFPE KGNEQPGVIP ADLVFIIDEK PHPVFTREGN DLIVTQKISL VEALTGYTVN LTTLDGRRLT IPVTNVVHPE YEEVVPKEGM
301: PLQKDQTKRG NLRIKFNIKF PTRLTSEQKT GVKKLLG
101: NPRNADDIFA EFFGFSSPFG GGRGGTRFSS SMFGDNMFAS FGEGGGGGGG SMHHGGARKA APIENKLPCS LEDLYKGTTK KMRISREIAD VSGKTMQVEE
201: ILTIDVKPGW KKGTKITFPE KGNEQPGVIP ADLVFIIDEK PHPVFTREGN DLIVTQKISL VEALTGYTVN LTTLDGRRLT IPVTNVVHPE YEEVVPKEGM
301: PLQKDQTKRG NLRIKFNIKF PTRLTSEQKT GVKKLLG
Arabidopsis Description
At2g20560/T13C7.15 [Source:UniProtKB/TrEMBL;Acc:Q9SIL3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.