CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY14974	Canola	nucleus	93.97	94.51
AT1G44160.1	Thale cress	mitochondrion	76.44	74.51
Os05t0427900-01	Rice	cytosol	21.55	47.47
GSMUA_Achr7P03030_001	Banana	cytosol	33.05	36.16
TraesCS3A01G386400.1	Wheat	cytosol	31.03	33.75
Os01t0875700-01	Rice	cytosol	31.61	33.64
Solyc06g060240.1.1	Tomato	cytosol	36.78	33.33
TraesCS1B01G278300.1	Wheat	cytosol	31.32	33.33
TraesCS3D01G379400.1	Wheat	cytosol	31.03	33.23
CDX97443	Canola	cytosol	28.74	33.22
TraesCS1A01G267600.1	Wheat	cytosol	31.03	33.03
TraesCS1D01G267500.1	Wheat	cytosol	31.32	32.93
TraesCS3B01G418500.1	Wheat	cytosol	30.75	32.92
KRH64663	Soybean	plastid	33.05	32.49
HORVU3Hr1G081940.1	Barley	cytosol	30.17	32.41
EES01846	Sorghum	cytosol	30.46	32.22
CDY35188	Canola	cytosol	29.6	31.79
PGSC0003DMT400045241	Potato	extracellular, mitochondrion	35.06	31.69
GSMUA_Achr8P32540_001	Banana	mitochondrion	25.29	31.65
CDX92876	Canola	cytoskeleton, cytosol, nucleus	28.74	31.45
CDY58657	Canola	cytosol	29.31	31.29
CDY29908	Canola	cytoskeleton, cytosol, nucleus	28.74	31.15
CDY64940	Canola	nucleus	29.31	31.1
Zm00001d012242_P001	Maize	cytosol	28.16	31.01
CDY27963	Canola	cytosol	29.02	30.7
CDY37986	Canola	cytosol	20.69	30.51
CDY68815	Canola	cytoskeleton, cytosol, nucleus	29.02	30.24
CDY20944	Canola	cytosol	26.44	30.16
CDY22173	Canola	cytosol	29.02	30.06
CDY07893	Canola	cytosol	27.87	30.03
CDY13869	Canola	cytosol	29.02	29.88
Zm00001d038250_P001	Maize	cytosol	28.74	29.85
CDY38388	Canola	cytosol	29.31	29.82
CDY65077	Canola	cytosol	28.74	29.76
CDY20637	Canola	cytosol	27.01	29.38
CDY54902	Canola	cytosol	27.87	29.13
CDY05498	Canola	cytosol	27.87	29.13
EES19566	Sorghum	cytosol	28.45	29.12
CDX88188	Canola	cytosol	26.72	28.97
CDX80523	Canola	cytosol	26.72	28.97
CDY30900	Canola	cytoskeleton, cytosol, nucleus	27.01	27.89
CDY45143	Canola	cytoskeleton, cytosol, nucleus	26.44	27.79
CDY20977	Canola	nucleus	32.18	27.79
CDY20589	Canola	nucleus	31.03	27.48
CDX97927	Canola	nucleus	33.33	26.79
CDY67277	Canola	cytosol, nucleus, plastid	33.05	26.44
CDX83026	Canola	cytosol	24.14	25.61
Zm00001d042653_P001	Maize	plastid	29.31	25.5
CDY36915	Canola	cytosol	24.43	25.45
CDY21803	Canola	nucleus	24.14	24.85
CDX68447	Canola	cytosol	24.14	24.49
CDY16617	Canola	nucleus	13.51	22.6
CDY24146	Canola	cytosol	24.43	22.55
CDX76646	Canola	golgi	20.98	21.1
CDY11430	Canola	golgi	20.98	21.1
CDY63310	Canola	endoplasmic reticulum	20.98	21.04
CDX89142	Canola	endoplasmic reticulum	20.98	21.04
HORVU0Hr1G000620.4	Barley	plastid	23.56	20.76
CDY59898	Canola	endoplasmic reticulum, golgi	20.69	20.75
CDX67894	Canola	endoplasmic reticulum, golgi	18.97	20.18
TraesCS6A01G421300.1	Wheat	cytosol	11.49	18.96
CDY65546	Canola	nucleus	20.98	17.34
CDX92386	Canola	nucleus	20.98	17.3
CDX92385	Canola	nucleus	20.98	17.3
CDY09117	Canola	nucleus	20.98	17.26
HORVU7Hr1G073040.2	Barley	cytosol	11.21	16.81
CDX88812	Canola	nucleus	19.54	16.67
CDX70980	Canola	nucleus	19.25	16.46
CDX90134	Canola	mitochondrion	16.95	13.72
CDX89453	Canola	plastid	16.95	13.05
CDY25588	Canola	plastid	16.95	13.0
CDY35719	Canola	mitochondrion	16.67	11.67
CDY45921	Canola	mitochondrion	14.66	11.41
CDY35761	Canola	mitochondrion	14.66	11.41
CDY63891	Canola	cytosol	15.8	11.32
CDY54516	Canola	mitochondrion	14.66	11.26
CDY58774	Canola	plastid	16.09	11.2
CDX86330	Canola	mitochondrion	14.66	11.18
CDX87288	Canola	plastid	15.8	10.98
CDX69371	Canola	mitochondrion	15.8	10.98
CDX95817	Canola	plastid	15.23	10.54
CDX92166	Canola	plastid	14.66	10.1

Protein Annotations

EnsemblPlants:CDY66166	EnsemblPlantsGene:GSBRNA2T00052206001	Gene3D:2.60.260.20	GO:A0A078JK16	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:DnaJ_C
InterPro:HSP40/DnaJ_pept-bd	PANTHER:PTHR24078	PANTHER:PTHR24078:SF522	PFAM:PF01556	ProteinID:CDY66166	ProteinID:CDY66166.1
SEG:seg	SUPFAM:SSF49493	UniParc:UPI0004EC410B	UniProt:A0A078JK16	MapMan:35.2	:

Description

BnaCnng49750DBnaCnng49750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JK16]

Coordinates

chrLK035116:+:1579..2809

Molecular Weight (calculated)

38757.4 Da

IEP (calculated)

10.164

GRAVY (calculated)

-0.684

Length

348 amino acids

Sequence
(BLAST)

001: MATTQGVAQP STKKRSFLLR DIFKICRSIS SVLPREKPNH KHERKLHTES KRHEDHKSNV TNQPNAFNFQ EAKVTKVEGV SLCKVRSYNR LNSVGHKKPL
101: SLSRSYSHNT AAVRQGSSCI GMSKSSSNRT DSAGFMRTLR RSTTTSPRSF ANPILYSTSS EKVAKPQPTE KKLSCTLEEL CNGCTKKIKI KRDVTTTSGQ
201: LSEEEETVEI KVKPGWKGGT KVTFEGKGNE AMGSCVPADL TFMIVEKEHE VFKRKGDDLE MAVEVSLLEA LTGFELCVAL PDGDNMSLKI EDVIHPGYVT
301: VIHGKGMPKP KDKGKTRGDL RVRFRAKFPE QLTDSQRAEI QSILQNDS

Best Arabidopsis Sequence Match ( AT1G44160.1 )
(BLAST)

001: MATQGMAQPS AKKRSFLLRD LFKLCRSISR VLPRDKTKHH HKAKHDTKET KRLDEEHKRN TPNAFEFRET KGIGKNNKVE GVSLCKVRSY RFDNTNTNFV
101: GSKKSLSRSC SQNTATATST NPTLRSLSFI GRSKSSSNRM TESGGFMPTL MRSTTTVPRS FANPILYSSS SAKVAKPSPT EKKLRCTLEE LCNGCTKKIK
201: IKRDVITSLG EKCEEEEMVE IKVKPGWKGG TKVTFEGKGN EAMRSVPADL TFVIVEKEHE VFKREGDDLE MAVEVSLLEA LTGCELSVAL LDGDNMRLRI
301: EDVIHPGYVT VVQGKGMPNL KEKGKRGDLR VRFRTKFPQH LTDEQRAEIH SILQDSS

Arabidopsis Description

HSP40/DnaJ peptide-binding protein [Source:UniProtKB/TrEMBL;Acc:Q0WRX5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.