Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029729.1-P | Field mustard | nucleus | 99.7 | 99.7 |
| CDY27963 | Canola | cytosol | 97.87 | 97.57 |
| CDY68815 | Canola | cytoskeleton, cytosol, nucleus | 93.29 | 91.62 |
| CDY58657 | Canola | cytosol | 90.55 | 91.1 |
| CDY07893 | Canola | cytosol | 89.33 | 90.71 |
| CDY22173 | Canola | cytosol | 92.07 | 89.88 |
| AT3G08910.1 | Thale cress | nucleus | 87.8 | 89.16 |
| KRG88624 | Soybean | nucleus | 82.01 | 79.82 |
| Solyc09g005350.2.1 | Tomato | nucleus, plastid | 82.62 | 79.71 |
| PGSC0003DMT400059397 | Potato | cytosol | 82.62 | 79.71 |
| KRH65726 | Soybean | nucleus | 81.71 | 79.53 |
| VIT_08s0105g00350.t01 | Wine grape | cytosol | 81.71 | 79.29 |
| KRH75968 | Soybean | nucleus | 79.57 | 77.45 |
| CDY35188 | Canola | cytosol | 69.51 | 70.37 |
| CDX92876 | Canola | cytoskeleton, cytosol, nucleus | 67.07 | 69.18 |
| CDY29908 | Canola | cytoskeleton, cytosol, nucleus | 67.68 | 69.16 |
| CDY65077 | Canola | cytosol | 69.51 | 67.86 |
| CDY38388 | Canola | cytosol | 70.73 | 67.84 |
| CDY13869 | Canola | cytosol | 69.21 | 67.16 |
| CDX97443 | Canola | cytosol | 61.28 | 66.78 |
| EES17644 | Sorghum | cytosol | 62.8 | 65.81 |
| Zm00001d010958_P001 | Maize | cytosol | 64.63 | 65.03 |
| CDY20944 | Canola | cytosol | 55.49 | 59.67 |
| TraesCS1A01G070300.1 | Wheat | cytosol | 61.59 | 59.59 |
| TraesCS1D01G072800.1 | Wheat | nucleus | 61.28 | 58.43 |
| CDX80523 | Canola | cytosol | 57.01 | 58.26 |
| CDX88188 | Canola | cytosol | 57.01 | 58.26 |
| TraesCS1B01G088700.1 | Wheat | cytosol | 61.59 | 58.21 |
| CDY37986 | Canola | cytosol | 41.46 | 57.63 |
| CDY45143 | Canola | cytoskeleton, cytosol, nucleus | 57.93 | 57.4 |
| CDY20637 | Canola | cytosol | 55.79 | 57.19 |
| CDY05498 | Canola | cytosol | 57.01 | 56.16 |
| CDY30900 | Canola | cytoskeleton, cytosol, nucleus | 57.62 | 56.08 |
| CDY54902 | Canola | cytosol | 56.71 | 55.86 |
| CDY36915 | Canola | cytosol | 56.4 | 55.39 |
| CDX83026 | Canola | cytosol | 54.88 | 54.88 |
| CDY21803 | Canola | nucleus | 54.88 | 53.25 |
| CDX68447 | Canola | cytosol | 55.18 | 52.77 |
| HORVU1Hr1G015040.2 | Barley | plastid | 60.98 | 52.22 |
| GSMUA_Achr6P15600_001 | Banana | cytosol | 68.29 | 50.68 |
| CDY24146 | Canola | cytosol | 56.71 | 49.34 |
| HORVU1Hr1G015060.2 | Barley | plastid | 32.93 | 37.89 |
| CDX67894 | Canola | endoplasmic reticulum, golgi | 35.37 | 35.47 |
| CDY59898 | Canola | endoplasmic reticulum, golgi | 37.5 | 35.45 |
| CDX89142 | Canola | endoplasmic reticulum | 37.2 | 35.16 |
| CDY63310 | Canola | endoplasmic reticulum | 37.2 | 35.16 |
| CDY11430 | Canola | golgi | 36.28 | 34.39 |
| CDX76646 | Canola | golgi | 36.28 | 34.39 |
| CDY66166 | Canola | plastid | 31.1 | 29.31 |
| CDY14974 | Canola | nucleus | 30.18 | 28.61 |
| CDY65546 | Canola | nucleus | 35.98 | 28.03 |
| CDY09117 | Canola | nucleus | 35.98 | 27.9 |
| CDX92385 | Canola | nucleus | 35.67 | 27.73 |
| CDX92386 | Canola | nucleus | 35.67 | 27.73 |
| CDX88812 | Canola | nucleus | 33.23 | 26.72 |
| CDX70980 | Canola | nucleus | 32.62 | 26.29 |
| CDY20977 | Canola | nucleus | 31.71 | 25.81 |
| CDY20589 | Canola | nucleus | 30.79 | 25.7 |
| CDX97927 | Canola | nucleus | 32.32 | 24.48 |
| CDY67277 | Canola | cytosol, nucleus, plastid | 32.01 | 24.14 |
| CDY16617 | Canola | nucleus | 13.72 | 21.63 |
| CDY45921 | Canola | mitochondrion | 28.05 | 20.58 |
| CDX89453 | Canola | plastid | 28.35 | 20.58 |
| CDY25588 | Canola | plastid | 28.35 | 20.48 |
| CDY35761 | Canola | mitochondrion | 27.74 | 20.36 |
| CDY54516 | Canola | mitochondrion | 27.74 | 20.09 |
| CDX86330 | Canola | mitochondrion | 27.74 | 19.96 |
| CDY63891 | Canola | cytosol | 28.05 | 18.93 |
| CDY58774 | Canola | plastid | 28.05 | 18.4 |
| CDX69371 | Canola | mitochondrion | 28.05 | 18.36 |
| CDX87288 | Canola | plastid | 27.44 | 17.96 |
| CDX90134 | Canola | mitochondrion | 23.17 | 17.67 |
| CDX95817 | Canola | plastid | 26.22 | 17.1 |
| CDX92166 | Canola | plastid | 26.22 | 17.03 |
| CDY35719 | Canola | mitochondrion | 23.17 | 15.29 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:19.1.5.2 | Gene3D:2.60.260.20 | GO:A0A078JEQ8 | UniProt:A0A078JEQ8 | EnsemblPlants:CDY64940 |
| ProteinID:CDY64940 | ProteinID:CDY64940.1 | InterPro:DnaJ_C | InterPro:DnaJ_domain | InterPro:DnaJ_domain_CS | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006457 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0051082 |
| EnsemblPlantsGene:GSBRNA2T00043884001 | InterPro:HSP40/DnaJ_pept-bd | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | PFAM:PF00226 |
| PFAM:PF01556 | PRINTS:PR00625 | ScanProsite:PS00636 | PFscan:PS50076 | PANTHER:PTHR24078 | PANTHER:PTHR24078:SF298 |
| SMART:SM00271 | SUPFAM:SSF46565 | SUPFAM:SSF49493 | UniParc:UPI0004EE1211 | SEG:seg | : |
Description
BnaA05g37100DBnaA05g37100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JEQ8]
Coordinates
chrLK034604:+:6405..8461
Molecular Weight (calculated)
36395.2 Da
IEP (calculated)
9.777
GRAVY (calculated)
-0.673
Length
328 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVDYYKVLQ VDRNAKDEDL KKAYRKLAMK WHPDKNPNSK KEAEAKFKQI SEAYDVLSDP QKRAIYDQYG EEGLNSQAPP PGAGGFPGGS NGGASFRFNG
101: RSADDIFSEF FGSSRPFGDS PFPFPEEVFS SYSRSAKGEA SNAAPPRKAA PIERQLPCSL EDLYKGTTKK MKISRDVIDS FGRPSTVEEI LTIEIKPGWK
201: KGTKITFPEK GNEQRGIIPS DLVFIVDEKP HAVFKRDGND LVITQKIPLV EALTGYTAQV TTLDGRTLTV PVNNVISPSY EEVVKGEGMP IPKDPSRKGN
301: LRIKFNIKFP SRLTTEQKTG IKRMFSSS
101: RSADDIFSEF FGSSRPFGDS PFPFPEEVFS SYSRSAKGEA SNAAPPRKAA PIERQLPCSL EDLYKGTTKK MKISRDVIDS FGRPSTVEEI LTIEIKPGWK
201: KGTKITFPEK GNEQRGIIPS DLVFIVDEKP HAVFKRDGND LVITQKIPLV EALTGYTAQV TTLDGRTLTV PVNNVISPSY EEVVKGEGMP IPKDPSRKGN
301: LRIKFNIKFP SRLTTEQKTG IKRMFSSS
001: MGVDYYKVLQ VDRNAKDDDL KKAYRKLAMK WHPDKNPNNK KDAEAKFKQI SEAYDVLSDP QKRAIYDQYG EEGLTSQAPP PGAGGGFSDG GASFRFNGRS
101: ADDIFSEFFG FTRPFGDSRG AGPSNGFRFA EDVFSSNVVP PRKAAPIERQ LPCSLEDLYK GVSKKMKISR DVLDSSGRPT TVEEILTIEI KPGWKKGTKI
201: TFPEKGNEQR GIIPSDLVFI VDEKPHAVFK RDGNDLVMTQ KIPLVEALTG YTAQVSTLDG RSVTVPINNV ISPSYEEVVK GEGMPIPKDP SKKGNLRIKF
301: TVKFPSRLTT EQKSGIKRMF SSS
101: ADDIFSEFFG FTRPFGDSRG AGPSNGFRFA EDVFSSNVVP PRKAAPIERQ LPCSLEDLYK GVSKKMKISR DVLDSSGRPT TVEEILTIEI KPGWKKGTKI
201: TFPEKGNEQR GIIPSDLVFI VDEKPHAVFK RDGNDLVMTQ KIPLVEALTG YTAQVSTLDG RSVTVPINNV ISPSYEEVVK GEGMPIPKDP SKKGNLRIKF
301: TVKFPSRLTT EQKSGIKRMF SSS
Arabidopsis Description
At3g08910 [Source:UniProtKB/TrEMBL;Acc:Q9SR91]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.