Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89142 | Canola | endoplasmic reticulum | 94.81 | 94.81 |
| CDX76646 | Canola | golgi | 94.24 | 94.51 |
| CDX67894 | Canola | endoplasmic reticulum, golgi | 89.05 | 94.5 |
| CDY63310 | Canola | endoplasmic reticulum | 94.24 | 94.24 |
| CDY11430 | Canola | golgi | 93.95 | 94.22 |
| Bra003501.1-P | Field mustard | nucleus | 89.05 | 83.29 |
| VIT_07s0005g01220.t01 | Wine grape | endoplasmic reticulum, golgi, vacuole | 78.96 | 79.42 |
| Solyc01g079610.2.1 | Tomato | nucleus | 78.96 | 79.42 |
| PGSC0003DMT400023249 | Potato | endoplasmic reticulum, golgi | 78.96 | 79.42 |
| TraesCS1B01G125100.1 | Wheat | nucleus | 75.22 | 74.57 |
| TraesCS1D01G107200.1 | Wheat | nucleus | 74.93 | 74.29 |
| GSMUA_Achr8P33890_001 | Banana | endoplasmic reticulum | 73.49 | 74.13 |
| TraesCS1A01G099300.1 | Wheat | nucleus | 74.35 | 73.71 |
| EES17752 | Sorghum | endoplasmic reticulum, golgi | 73.78 | 73.14 |
| Os05t0156500-01 | Rice | cytosol, nucleus | 30.55 | 72.6 |
| Zm00001d009783_P004 | Maize | mitochondrion | 71.76 | 71.14 |
| Zm00001d037586_P001 | Maize | endoplasmic reticulum | 72.62 | 68.66 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, vacuole | 73.78 | 68.63 |
| KRH55068 | Soybean | cytosol | 26.51 | 67.15 |
| KXG32445 | Sorghum | endoplasmic reticulum | 63.4 | 63.58 |
| HORVU1Hr1G022990.1 | Barley | cytosol | 73.2 | 59.76 |
| Zm00001d009210_P001 | Maize | endoplasmic reticulum | 57.06 | 48.77 |
| CDY58657 | Canola | cytosol | 35.45 | 37.73 |
| CDY64940 | Canola | nucleus | 35.45 | 37.5 |
| CDY07893 | Canola | cytosol | 34.87 | 37.46 |
| CDY27963 | Canola | cytosol | 35.16 | 37.08 |
| CDY68815 | Canola | cytoskeleton, cytosol, nucleus | 35.16 | 36.53 |
| CDY35188 | Canola | cytosol | 34.01 | 36.42 |
| CDY20944 | Canola | cytosol | 31.99 | 36.39 |
| CDY22173 | Canola | cytosol | 34.87 | 36.01 |
| CDY29908 | Canola | cytoskeleton, cytosol, nucleus | 32.85 | 35.51 |
| CDX92876 | Canola | cytoskeleton, cytosol, nucleus | 32.28 | 35.22 |
| CDX88188 | Canola | cytosol | 32.56 | 35.2 |
| CDX80523 | Canola | cytosol | 32.56 | 35.2 |
| CDY65077 | Canola | cytosol | 33.43 | 34.52 |
| CDY20637 | Canola | cytosol | 31.7 | 34.38 |
| CDY13869 | Canola | cytosol | 33.43 | 34.32 |
| CDY05498 | Canola | cytosol | 32.85 | 34.23 |
| CDY54902 | Canola | cytosol | 32.85 | 34.23 |
| CDX97443 | Canola | cytosol | 29.68 | 34.22 |
| CDY38388 | Canola | cytosol | 33.43 | 33.92 |
| CDY30900 | Canola | cytoskeleton, cytosol, nucleus | 32.85 | 33.83 |
| CDY45143 | Canola | cytoskeleton, cytosol, nucleus | 31.7 | 33.23 |
| CDY37986 | Canola | cytosol | 22.48 | 33.05 |
| CDX83026 | Canola | cytosol | 30.84 | 32.62 |
| CDY36915 | Canola | cytosol | 30.55 | 31.74 |
| CDY65546 | Canola | nucleus | 37.75 | 31.12 |
| CDX68447 | Canola | cytosol | 30.55 | 30.9 |
| CDX92386 | Canola | nucleus | 37.46 | 30.81 |
| CDX92385 | Canola | nucleus | 37.46 | 30.81 |
| CDY09117 | Canola | nucleus | 37.18 | 30.5 |
| CDX88812 | Canola | nucleus | 35.73 | 30.39 |
| CDX70980 | Canola | nucleus | 35.16 | 29.98 |
| CDY21803 | Canola | nucleus | 29.11 | 29.88 |
| CDY24146 | Canola | cytosol | 30.55 | 28.12 |
| CDY16617 | Canola | nucleus | 14.12 | 23.56 |
| CDX89453 | Canola | plastid | 27.95 | 21.46 |
| CDY25588 | Canola | plastid | 27.95 | 21.37 |
| CDY45921 | Canola | mitochondrion | 27.38 | 21.25 |
| CDY35761 | Canola | mitochondrion | 27.09 | 21.03 |
| CDY66166 | Canola | plastid | 20.75 | 20.69 |
| CDY14974 | Canola | nucleus | 20.46 | 20.52 |
| CDX87288 | Canola | plastid | 29.39 | 20.36 |
| CDY54516 | Canola | mitochondrion | 26.51 | 20.31 |
| CDY58774 | Canola | plastid | 29.11 | 20.2 |
| CDX86330 | Canola | mitochondrion | 26.51 | 20.18 |
| CDY63891 | Canola | cytosol | 27.95 | 19.96 |
| CDX69371 | Canola | mitochondrion | 27.67 | 19.16 |
| CDX90134 | Canola | mitochondrion | 23.63 | 19.07 |
| CDY20977 | Canola | nucleus | 19.88 | 17.12 |
| CDY20589 | Canola | nucleus | 19.31 | 17.05 |
| CDY35719 | Canola | mitochondrion | 23.92 | 16.7 |
| CDX95817 | Canola | plastid | 23.63 | 16.3 |
| CDX97927 | Canola | nucleus | 20.17 | 16.17 |
| CDY67277 | Canola | cytosol, nucleus, plastid | 20.17 | 16.09 |
| CDX92166 | Canola | plastid | 23.34 | 16.04 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:19.1.1.2.1.2 | Gene3D:2.60.260.20 | GO:A0A078J2D7 | UniProt:A0A078J2D7 | EnsemblPlants:CDY59898 |
| ProteinID:CDY59898 | ProteinID:CDY59898.1 | ncoils:Coil | InterPro:DnaJ_C | InterPro:DnaJ_domain | InterPro:DnaJ_domain_CS |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006457 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0051082 | EnsemblPlantsGene:GSBRNA2T00027875001 | InterPro:HSP40/DnaJ_pept-bd | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf |
| PFAM:PF00226 | PFAM:PF01556 | PRINTS:PR00625 | ScanProsite:PS00636 | PFscan:PS50076 | PANTHER:PTHR43888 |
| PANTHER:PTHR43888:SF14 | SMART:SM00271 | SUPFAM:SSF46565 | SUPFAM:SSF49493 | TMHMM:TMhelix | UniParc:UPI0004EF4B5F |
| SEG:seg | : | : | : | : | : |
Description
BnaC06g43160DBnaC06g43160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J2D7]
Coordinates
chrLK033819:-:7910..10091
Molecular Weight (calculated)
39233.8 Da
IEP (calculated)
6.262
GRAVY (calculated)
-0.588
Length
347 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIRWSELCI ALFALSYAIC VIRVFSYYDV LQVPKGASDE HIKRAYRKLA LKYHPDKNPG NDEATRKFAD INNAYEVLSD EEKREIYNKY GEEGLKQHAA
101: NGGRGGGGGG MNMQDIFSQF FGGGGSTEEE EKVVKGDDVI VELEATLEDL YMGGSMKVWR EKNVIKPAPG KRKCNCRDEV YHRQIGPGMF QQMTEQVCDK
201: CPNVKFEREG YFVTVDIEKG MKDGEEVSFY EDGEPILDGE PGDLKFRIKT APHARFRRDG NDLHMTVNIT LVEALVGFEK SFKHLDDHEV DISSKGITKP
301: KEVKKFKGEG MPLHFSTKKG NLFVTFEVLF PSSLTEDQKK KIKEVLA
101: NGGRGGGGGG MNMQDIFSQF FGGGGSTEEE EKVVKGDDVI VELEATLEDL YMGGSMKVWR EKNVIKPAPG KRKCNCRDEV YHRQIGPGMF QQMTEQVCDK
201: CPNVKFEREG YFVTVDIEKG MKDGEEVSFY EDGEPILDGE PGDLKFRIKT APHARFRRDG NDLHMTVNIT LVEALVGFEK SFKHLDDHEV DISSKGITKP
301: KEVKKFKGEG MPLHFSTKKG NLFVTFEVLF PSSLTEDQKK KIKEVLA
001: MAIRWSELCI VLFALSYAIC VLAGKSYYDV LQVPKGASDE QIKRAYRKLA LKYHPDKNQG NEEATRKFAE INNAYEVLSD EEKREIYNKY GEEGLKQFSA
101: NGGRGGGGGG MNMQDIFSSF FGGGSMEEEE KVVKGDDVIV ELEATLEDLY MGGSMKVWRE KNVIKPAPGK RKCNCRNEVY HRQIGPGMFQ QMTEQVCDKC
201: PNVKYEREGY FVTVDIEKGM KDGEEVSFYE DGEPILDGDP GDLKFRIRTA PHARFRRDGN DLHMNVNITL VEALVGFEKS FKHLDDHEVD ISSKGITKPK
301: EVKKFKGEGM PLHYSTKKGN LFVTFEVLFP SSLTDDQKKK IKEVFA
101: NGGRGGGGGG MNMQDIFSSF FGGGSMEEEE KVVKGDDVIV ELEATLEDLY MGGSMKVWRE KNVIKPAPGK RKCNCRNEVY HRQIGPGMFQ QMTEQVCDKC
201: PNVKYEREGY FVTVDIEKGM KDGEEVSFYE DGEPILDGDP GDLKFRIRTA PHARFRRDGN DLHMNVNITL VEALVGFEKS FKHLDDHEVD ISSKGITKPK
301: EVKKFKGEGM PLHYSTKKGN LFVTFEVLFP SSLTDDQKKK IKEVFA
Arabidopsis Description
ERDJ3BDnaJ protein ERDJ3B [Source:UniProtKB/Swiss-Prot;Acc:Q9LZK5]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.