CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 7
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
EER93587
EES13770
EES15057
EES17752
KXG29291
KXG32445

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G62600.1	EER93587	AT1G09080.1	19763086
AT3G62600.1	EES13770	AT2G25110.1	19763086
AT3G62600.1	EES15057	AT2G25110.1	19763086
AT3G62600.1	EES17752	AT3G62600.1	19763086
AT3G62600.1	KXG32445	AT3G62600.1	19763086
AT3G62600.1	KXG29291	AT5G28540.1	19763086

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0156500-01	Rice	cytosol, nucleus	34.1	80.82
EES17752	Sorghum	endoplasmic reticulum, golgi	72.83	72.0
GSMUA_Achr8P33890_001	Banana	endoplasmic reticulum	69.65	70.06
KRH68242	Soybean	endoplasmic reticulum	67.92	68.51
VIT_07s0005g01220.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	68.21	68.41
KRG96505	Soybean	nucleus	67.63	68.22
PGSC0003DMT400023249	Potato	endoplasmic reticulum, golgi	66.76	66.96
Solyc01g079610.2.1	Tomato	nucleus	66.47	66.67
KRH69236	Soybean	endoplasmic reticulum	65.03	65.03
AT3G62600.1	Thale cress	endoplasmic reticulum, golgi	64.74	64.74
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, vacuole	69.65	64.61
CDY63310	Canola	endoplasmic reticulum	64.45	64.27
CDX89142	Canola	endoplasmic reticulum	64.45	64.27
CDY11430	Canola	golgi	64.16	64.16
CDX76646	Canola	golgi	64.16	64.16
Bra007687.1-P	Field mustard	golgi	64.16	64.16
Zm00001d009210_P001	Maize	endoplasmic reticulum	74.86	63.79
CDY59898	Canola	endoplasmic reticulum, golgi	63.58	63.4
CDX67894	Canola	endoplasmic reticulum, golgi	58.09	61.47
KRH55068	Soybean	cytosol	23.99	60.58
Bra003501.1-P	Field mustard	nucleus	60.69	56.6
Bra014400.1-P	Field mustard	golgi	63.87	33.08
EES17644	Sorghum	cytosol	29.77	32.91
EES19943	Sorghum	cytosol	32.66	31.22
EES02163	Sorghum	cytosol	29.48	30.27
KXG37403	Sorghum	cytosol	36.13	29.9
EER93745	Sorghum	nucleus	35.55	29.36
EES14600	Sorghum	cytosol	28.9	29.15
OQU82085	Sorghum	nucleus	34.1	28.23
EES13688	Sorghum	cytosol	28.61	27.89
KXG29372	Sorghum	cytosol	26.88	27.51
EES07516	Sorghum	nucleus	33.24	27.38
EES01846	Sorghum	cytosol	23.12	24.32
EES15725	Sorghum	mitochondrion, plastid	27.17	22.43
EES19566	Sorghum	cytosol	21.97	22.35
EER89093	Sorghum	mitochondrion, plastid	27.46	21.84
EES13204	Sorghum	plastid	27.17	20.98
KXG31305	Sorghum	plastid	28.61	19.92
KXG19604	Sorghum	mitochondrion	26.01	19.35
OQU92981	Sorghum	plastid	25.43	16.33

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.1.2.1.2	Gene3D:2.60.260.20	UniProt:A0A1B6Q3J7	ncoils:Coil	InterPro:DnaJ_C
InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006457
GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:IPR001623	InterPro:IPR036869
InterPro:J_dom_sf	EnsemblPlants:KXG32445	ProteinID:KXG32445	ProteinID:KXG32445.1	PFAM:PF00226	PFAM:PF01556
PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR43888	PANTHER:PTHR43888:SF14	SMART:SM00271
EnsemblPlantsGene:SORBI_3003G155800	SUPFAM:SSF46565	SUPFAM:SSF49493	SignalP:SignalP-noTM	UniParc:UPI00081AB8D2	SEG:seg

Description

hypothetical protein

Coordinates

chr3:-:17113462..17118555

Molecular Weight (calculated)

39589.8 Da

IEP (calculated)

5.369

GRAVY (calculated)

-0.702

Length

346 amino acids

Sequence
(BLAST)

001: MAARRAPLLV AVLLLHQTVS ALAGKSYYEI LQVSKGASED KIKRAYRKLA LKYHPDKNPN NEEADRQFTE INNAYEVLTN QEKRKVYDWY GEEGLEQSHG
101: RHSDGDGHAM NIEHVFSNFF GGGSMEEEEE RTLKGDDVIV ELDASLEDLY MGGSLKIWRE KNVIKPAPGN RRCKCRNEIR QREIAPGVFY QMSEQVCDTC
201: PNVKYVREGD FINVDIEKGM QDGQEILFYE DGEPKIDGES GDLKFNIRTA RHERFRREGN DLHTTVEISL SEALVGFEKN IKHLDNHAVE IGTKVITKPK
301: EVRKSEGEGM PLYHSNEKGD LYVIFEVVFP KDLTDDQKAK LMNIFI

Best Arabidopsis Sequence Match ( AT3G62600.1 )
(BLAST)

001: MAIRWSELCI VLFALSYAIC VLAGKSYYDV LQVPKGASDE QIKRAYRKLA LKYHPDKNQG NEEATRKFAE INNAYEVLSD EEKREIYNKY GEEGLKQFSA
101: NGGRGGGGGG MNMQDIFSSF FGGGSMEEEE KVVKGDDVIV ELEATLEDLY MGGSMKVWRE KNVIKPAPGK RKCNCRNEVY HRQIGPGMFQ QMTEQVCDKC
201: PNVKYEREGY FVTVDIEKGM KDGEEVSFYE DGEPILDGDP GDLKFRIRTA PHARFRRDGN DLHMNVNITL VEALVGFEKS FKHLDDHEVD ISSKGITKPK
301: EVKKFKGEGM PLHYSTKKGN LFVTFEVLFP SSLTDDQKKK IKEVFA

Arabidopsis Description

ERDJ3BDnaJ protein ERDJ3B [Source:UniProtKB/Swiss-Prot;Acc:Q9LZK5]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.